RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 HELQQ8TDG4 1101 aa17.48■□□□□ 0.39
U2AF1-211ENST00000486519 RPP25Q9BUL9 199 aaKnown RBP17.48■□□□□ 0.39
U2AF1-211ENST00000486519 DCTPP1Q9H773 170 aa17.48■□□□□ 0.39
U2AF1-211ENST00000486519 PALM3A6NDB9 673 aaPredicted RBP17.47■□□□□ 0.39
U2AF1-211ENST00000486519 GDF9O60383 454 aa17.47■□□□□ 0.39
U2AF1-211ENST00000486519 CLCN4P51793 760 aa17.47■□□□□ 0.39
U2AF1-211ENST00000486519 ECHDC2Q86YB7 292 aa17.47■□□□□ 0.39
U2AF1-211ENST00000486519 PIBF1Q8WXW3 757 aa17.47■□□□□ 0.39
U2AF1-211ENST00000486519 NELL1Q92832 810 aa17.47■□□□□ 0.39
U2AF1-211ENST00000486519 HELLSQ9NRZ9 838 aa17.47■□□□□ 0.39
U2AF1-211ENST00000486519 ZSWIM5Q9P217 1185 aa17.47■□□□□ 0.39
U2AF1-211ENST00000486519 EPS15L1Q9UBC2 864 aa17.47■□□□□ 0.39
U2AF1-211ENST00000486519 ANGPTL2Q9UKU9 493 aa17.47■□□□□ 0.39
U2AF1-211ENST00000486519 PCDHGA2Q9Y5H1 932 aa17.47■□□□□ 0.39
U2AF1-211ENST00000486519 IRAK3Q9Y616 596 aa17.47■□□□□ 0.39
U2AF1-211ENST00000486519 GPR182O15218 404 aa17.46■□□□□ 0.39
U2AF1-211ENST00000486519 LAMTOR5O43504 91 aa17.46■□□□□ 0.39
U2AF1-211ENST00000486519 B4GALT3O60512 393 aa17.46■□□□□ 0.39
U2AF1-211ENST00000486519 STARD6P59095 220 aa17.46■□□□□ 0.39
U2AF1-211ENST00000486519 DMWDQ09019 674 aa17.46■□□□□ 0.39
U2AF1-211ENST00000486519 NLRX1Q86UT6 975 aa17.46■□□□□ 0.39
U2AF1-211ENST00000486519 IQCA1Q86XH1 822 aa17.46■□□□□ 0.39
U2AF1-211ENST00000486519 NME8Q8N427 588 aa17.46■□□□□ 0.39
U2AF1-211ENST00000486519 ATRIPQ8WXE1 791 aa17.46■□□□□ 0.39
U2AF1-211ENST00000486519 KLHL5Q96PQ7 755 aa17.46■□□□□ 0.39
U2AF1-211ENST00000486519 FBXO4Q9UKT5 387 aa17.46■□□□□ 0.39
U2AF1-211ENST00000486519 ANKRD11Q6UB99 2663 aaPredicted RBP17.46■□□□□ 0.39
U2AF1-211ENST00000486519 CNOT1A5YKK6 2376 aaKnown RBP17.45■□□□□ 0.38
U2AF1-211ENST00000486519 SPDYE4A6NLX3 237 aa17.45■□□□□ 0.38
U2AF1-211ENST00000486519 VTNP04004 478 aa17.45■□□□□ 0.38
U2AF1-211ENST00000486519 PCP11498 1178 aaKnown RBP17.45■□□□□ 0.38
U2AF1-211ENST00000486519 NMIQ13287 307 aaPredicted RBP17.45■□□□□ 0.38
U2AF1-211ENST00000486519 MCMDC2Q4G0Z9 681 aa17.45■□□□□ 0.38
U2AF1-211ENST00000486519 N4BP2L1Q5TBK1 243 aaPredicted RBP17.45■□□□□ 0.38
U2AF1-211ENST00000486519 ABI1Q8IZP0 508 aa17.45■□□□□ 0.38
U2AF1-211ENST00000486519 GIMAP8Q8ND71 665 aaPredicted RBP17.45■□□□□ 0.38
U2AF1-211ENST00000486519 GPRASP2Q96D09 838 aa17.45■□□□□ 0.38
U2AF1-211ENST00000486519 TMEM169Q96HH4 297 aa17.45■□□□□ 0.38
U2AF1-211ENST00000486519 RIOX1Q9H6W3 641 aa17.45■□□□□ 0.38
U2AF1-211ENST00000486519 WDR6Q9NNW5 1121 aaKnown RBP17.45■□□□□ 0.38
U2AF1-211ENST00000486519 ZSCAN32Q9NX65 697 aa17.45■□□□□ 0.38
U2AF1-211ENST00000486519 CLUHO75153 1309 aa17.45■□□□□ 0.38
U2AF1-211ENST00000486519 SALL3Q9BXA9 1300 aa17.45■□□□□ 0.38
U2AF1-211ENST00000486519 ZBTB42B2RXF5 422 aa17.44■□□□□ 0.38
U2AF1-211ENST00000486519 MEIS2O14770 477 aa17.44■□□□□ 0.38
U2AF1-211ENST00000486519 GPR32O75388 356 aa17.44■□□□□ 0.38
U2AF1-211ENST00000486519 SSBP05455 408 aaKnown RBP eCLIP17.44■□□□□ 0.38
U2AF1-211ENST00000486519 CNPP09543 421 aaKnown RBP17.44■□□□□ 0.38
U2AF1-211ENST00000486519 NCLP19338 710 aaKnown RBP17.44■□□□□ 0.38
U2AF1-211ENST00000486519 CD72P21854 359 aa17.44■□□□□ 0.38
U2AF1-211ENST00000486519 GPC5P78333 572 aa17.44■□□□□ 0.38
U2AF1-211ENST00000486519 SNW1Q13573 536 aaKnown RBP17.44■□□□□ 0.38
U2AF1-211ENST00000486519 HTR4Q13639 388 aa17.44■□□□□ 0.38
U2AF1-211ENST00000486519 C20orf194Q5TEA3 1177 aa17.44■□□□□ 0.38
U2AF1-211ENST00000486519 C15orf39Q6ZRI6 1047 aa17.44■□□□□ 0.38
U2AF1-211ENST00000486519 DDX53Q86TM3 631 aaKnown RBP17.44■□□□□ 0.38
U2AF1-211ENST00000486519 ZNF598Q86UK7 904 aaKnown RBP17.44■□□□□ 0.38
U2AF1-211ENST00000486519 TMEM87AQ8NBN3 555 aa17.44■□□□□ 0.38
U2AF1-211ENST00000486519 NETO1Q8TDF5 533 aa17.44■□□□□ 0.38
U2AF1-211ENST00000486519 BBXQ8WY36 941 aaPredicted RBP17.44■□□□□ 0.38
U2AF1-211ENST00000486519 ZNF668Q96K58 619 aaPredicted RBP17.44■□□□□ 0.38
U2AF1-211ENST00000486519 RNF41Q9H4P4 317 aaPredicted RBP17.44■□□□□ 0.38
U2AF1-211ENST00000486519 SLC2A4RGQ9NR83 387 aa17.44■□□□□ 0.38
U2AF1-211ENST00000486519 NUMBLQ9Y6R0 609 aa17.44■□□□□ 0.38
U2AF1-211ENST00000486519 MTCL1Q9Y4B5 1905 aaKnown RBP17.43■□□□□ 0.38
U2AF1-211ENST00000486519 ZC3H11AO75152 810 aaKnown RBP eCLIP17.43■□□□□ 0.38
U2AF1-211ENST00000486519 RFPL2O75678 378 aa17.43■□□□□ 0.38
U2AF1-211ENST00000486519 SEC23AQ15436 765 aa17.43■□□□□ 0.38
U2AF1-211ENST00000486519 SECISBP2LQ93073 1101 aaKnown RBP17.43■□□□□ 0.38
U2AF1-211ENST00000486519 IGSF21Q96ID5 467 aa17.43■□□□□ 0.38
U2AF1-211ENST00000486519 DDX23Q9BUQ8 820 aaKnown RBP17.43■□□□□ 0.38
U2AF1-211ENST00000486519 SENP2Q9HC62 589 aa17.43■□□□□ 0.38
U2AF1-211ENST00000486519 MAN1C1Q9NR34 630 aa17.43■□□□□ 0.38
U2AF1-211ENST00000486519 UBIAD1Q9Y5Z9 338 aa17.43■□□□□ 0.38
U2AF1-211ENST00000486519 WDFY3Q8IZQ1 3526 aa17.42■□□□□ 0.38
U2AF1-211ENST00000486519 CCDC195A0A1B0GUA6 201 aa17.42■□□□□ 0.38
U2AF1-211ENST00000486519 C1QTNF9BB2RNN3 333 aa17.42■□□□□ 0.38
U2AF1-211ENST00000486519 ANHXE9PGG2 379 aa17.42■□□□□ 0.38
U2AF1-211ENST00000486519 HOXA2O43364 376 aa17.42■□□□□ 0.38
U2AF1-211ENST00000486519 C1QTNF9P0C862 333 aa17.42■□□□□ 0.38
U2AF1-211ENST00000486519 MX1P20591 662 aa17.42■□□□□ 0.38
U2AF1-211ENST00000486519 FGFR4P22455 802 aa17.42■□□□□ 0.38
U2AF1-211ENST00000486519 KLRC2P26717 231 aa17.42■□□□□ 0.38
U2AF1-211ENST00000486519 ALDH7A1P49419 539 aaKnown RBP17.42■□□□□ 0.38
U2AF1-211ENST00000486519 CRYBB1P53674 252 aaPredicted RBP17.42■□□□□ 0.38
U2AF1-211ENST00000486519 ACTR2P61160 394 aa17.42■□□□□ 0.38
U2AF1-211ENST00000486519 LONRF3Q496Y0 759 aa17.42■□□□□ 0.38
U2AF1-211ENST00000486519 SMARCC2Q8TAQ2 1214 aa17.42■□□□□ 0.38
U2AF1-211ENST00000486519 ZNF707Q96C28 371 aaPredicted RBP17.42■□□□□ 0.38
U2AF1-211ENST00000486519 NRDE2Q9H7Z3 1164 aa17.42■□□□□ 0.38
U2AF1-211ENST00000486519 JPH1Q9HDC5 661 aaPredicted RBP17.42■□□□□ 0.38
U2AF1-211ENST00000486519 DNAJB4Q9UDY4 337 aa17.42■□□□□ 0.38
U2AF1-211ENST00000486519 ZMIZ1Q9ULJ6 1067 aa17.42■□□□□ 0.38
U2AF1-211ENST00000486519 SETXQ7Z333 2677 aaKnown RBP17.42■□□□□ 0.38
U2AF1-211ENST00000486519 PNMA6FA0A0J9YX94 578 aa17.41■□□□□ 0.38
U2AF1-211ENST00000486519 KANSL1LA0AUZ9 987 aa17.41■□□□□ 0.38
U2AF1-211ENST00000486519 MEIS3P2A8K0S8 358 aa17.41■□□□□ 0.38
U2AF1-211ENST00000486519 INPPL1O15357 1258 aa17.41■□□□□ 0.38
U2AF1-211ENST00000486519 LILRB3O75022 631 aa17.41■□□□□ 0.38
U2AF1-211ENST00000486519 PROS1P07225 676 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms