RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 NBPF12Q5TAG4 269 aaPredicted RBP12.21□□□□□ -0.45
SMPD4-218ENST00000482171 DENND2CQ68D51 928 aa12.21□□□□□ -0.45
SMPD4-218ENST00000482171 PLA2G4FQ68DD2 849 aa12.21□□□□□ -0.45
SMPD4-218ENST00000482171 LMBRD2Q68DH5 695 aaPredicted RBP12.21□□□□□ -0.45
SMPD4-218ENST00000482171 RAD9BQ6WBX8 426 aa12.21□□□□□ -0.45
SMPD4-218ENST00000482171 CATSPER3Q86XQ3 398 aa12.21□□□□□ -0.45
SMPD4-218ENST00000482171 PROCA1Q8NCQ7 364 aaPredicted RBP12.21□□□□□ -0.45
SMPD4-218ENST00000482171 FAM213AQ9BRX8 229 aa12.21□□□□□ -0.45
SMPD4-218ENST00000482171 RIOX1Q9H6W3 641 aa12.21□□□□□ -0.45
SMPD4-218ENST00000482171 LIMA1Q9UHB6 759 aaKnown RBP12.21□□□□□ -0.45
SMPD4-218ENST00000482171 TCHHQ07283 1943 aa12.21□□□□□ -0.45
SMPD4-218ENST00000482171 CCDC160A6NGH7 325 aa12.21□□□□□ -0.46
SMPD4-218ENST00000482171 JAK3P52333 1124 aa12.21□□□□□ -0.46
SMPD4-218ENST00000482171 NPEPPSP55786 919 aa12.21□□□□□ -0.46
SMPD4-218ENST00000482171 APBA1Q02410 837 aa12.21□□□□□ -0.46
SMPD4-218ENST00000482171 UAP1Q16222 522 aaPredicted RBP12.21□□□□□ -0.46
SMPD4-218ENST00000482171 KAZNQ674X7 775 aa12.21□□□□□ -0.46
SMPD4-218ENST00000482171 SLC16A10Q8TF71 515 aa12.21□□□□□ -0.46
SMPD4-218ENST00000482171 CEP63Q96MT8 703 aa12.21□□□□□ -0.46
SMPD4-218ENST00000482171 TRIM10Q9UDY6 481 aa12.21□□□□□ -0.46
SMPD4-218ENST00000482171 ESYT3A0FGR9 886 aa12.2□□□□□ -0.46
SMPD4-218ENST00000482171 CHUKO15111 745 aa12.2□□□□□ -0.46
SMPD4-218ENST00000482171 NR3C2P08235 984 aa12.2□□□□□ -0.46
SMPD4-218ENST00000482171 ACTN1P12814 892 aa12.2□□□□□ -0.46
SMPD4-218ENST00000482171 LMNB1P20700 586 aa12.2□□□□□ -0.46
SMPD4-218ENST00000482171 SMARCA1P28370 1054 aa12.2□□□□□ -0.46
SMPD4-218ENST00000482171 SHROOM1Q2M3G4 852 aaPredicted RBP12.2□□□□□ -0.46
SMPD4-218ENST00000482171 SCYL2Q6P3W7 929 aa12.2□□□□□ -0.46
SMPD4-218ENST00000482171 HAUS6Q7Z4H7 955 aa12.2□□□□□ -0.46
SMPD4-218ENST00000482171 MSTO1Q9BUK6 570 aa12.2□□□□□ -0.46
SMPD4-218ENST00000482171 RSPH10B2B2RC85 870 aa12.2□□□□□ -0.46
SMPD4-218ENST00000482171 MSH4O15457 936 aa12.2□□□□□ -0.46
SMPD4-218ENST00000482171 MYCP01106 439 aaPredicted RBP12.2□□□□□ -0.46
SMPD4-218ENST00000482171 RSPH10BP0C881 870 aa12.2□□□□□ -0.46
SMPD4-218ENST00000482171 APBB1IPQ7Z5R6 666 aaPredicted RBP12.2□□□□□ -0.46
SMPD4-218ENST00000482171 DAGLBQ8NCG7 672 aa12.2□□□□□ -0.46
SMPD4-218ENST00000482171 AGBL3Q8NEM8 1001 aa12.2□□□□□ -0.46
SMPD4-218ENST00000482171 FAM163AQ96GL9 167 aaPredicted RBP12.2□□□□□ -0.46
SMPD4-218ENST00000482171 SLC24A3Q9HC58 644 aa12.2□□□□□ -0.46
SMPD4-218ENST00000482171 GOLGA8SH3BPF8 625 aa12.2□□□□□ -0.46
SMPD4-218ENST00000482171 H3BQF6 201 aa12.2□□□□□ -0.46
SMPD4-218ENST00000482171 WNT7AO00755 349 aa12.2□□□□□ -0.46
SMPD4-218ENST00000482171 THAP12O43422 761 aa12.2□□□□□ -0.46
SMPD4-218ENST00000482171 NCK2O43639 380 aa12.2□□□□□ -0.46
SMPD4-218ENST00000482171 GYPCP04921 128 aa12.2□□□□□ -0.46
SMPD4-218ENST00000482171 ATP1A1P05023 1023 aaKnown RBP12.2□□□□□ -0.46
SMPD4-218ENST00000482171 PSMC5P62195 406 aa12.2□□□□□ -0.46
SMPD4-218ENST00000482171 LPAR1Q92633 364 aa12.2□□□□□ -0.46
SMPD4-218ENST00000482171 TAAR1Q96RJ0 339 aa12.2□□□□□ -0.46
SMPD4-218ENST00000482171 FERMT1Q9BQL6 677 aa12.2□□□□□ -0.46
SMPD4-218ENST00000482171 TEX13BQ9BXU2 312 aa12.2□□□□□ -0.46
SMPD4-218ENST00000482171 SLC5A4Q9NY91 659 aa12.2□□□□□ -0.46
SMPD4-218ENST00000482171 STIM2Q9P246 746 aa12.2□□□□□ -0.46
SMPD4-218ENST00000482171 PACSIN2Q9UNF0 486 aaPredicted RBP12.2□□□□□ -0.46
SMPD4-218ENST00000482171 PCDHA10Q9Y5I2 948 aa12.2□□□□□ -0.46
SMPD4-218ENST00000482171 TOPAZ1Q8N9V7 1692 aa12.2□□□□□ -0.46
SMPD4-218ENST00000482171 ZNF233A6NK53 670 aa12.2□□□□□ -0.46
SMPD4-218ENST00000482171 MYO1FO00160 1098 aa12.2□□□□□ -0.46
SMPD4-218ENST00000482171 CTNND1O60716 968 aaKnown RBP12.2□□□□□ -0.46
SMPD4-218ENST00000482171 MED24O75448 989 aa12.2□□□□□ -0.46
SMPD4-218ENST00000482171 NCAPHQ15003 741 aa12.2□□□□□ -0.46
SMPD4-218ENST00000482171 NUDT12Q9BQG2 462 aa12.2□□□□□ -0.46
SMPD4-218ENST00000482171 ALDH3A1P30838 453 aa12.19□□□□□ -0.46
SMPD4-218ENST00000482171 ALS2CLQ60I27 953 aa12.19□□□□□ -0.46
SMPD4-218ENST00000482171 PNKPQ96T60 521 aa12.19□□□□□ -0.46
SMPD4-218ENST00000482171 CEP72Q9P209 647 aa12.19□□□□□ -0.46
SMPD4-218ENST00000482171 PTPN22Q9Y2R2 807 aa12.19□□□□□ -0.46
SMPD4-218ENST00000482171 YWHABP31946 246 aaKnown RBP12.19□□□□□ -0.46
SMPD4-218ENST00000482171 FXR2P51116 673 aaKnown RBP eCLIP12.19□□□□□ -0.46
SMPD4-218ENST00000482171 EMBQ6PCB8 327 aa12.19□□□□□ -0.46
SMPD4-218ENST00000482171 CAPN12Q6ZSI9 719 aa12.19□□□□□ -0.46
SMPD4-218ENST00000482171 PPFIBP2Q8ND30 876 aa12.19□□□□□ -0.46
SMPD4-218ENST00000482171 NLRP7Q8WX94 980 aa12.19□□□□□ -0.46
SMPD4-218ENST00000482171 AP1M1Q9BXS5 423 aa12.19□□□□□ -0.46
SMPD4-218ENST00000482171 KCNH7Q9NS40 1196 aa12.19□□□□□ -0.46
SMPD4-218ENST00000482171 NOVA2Q9UNW9 492 aaKnown RBP12.19□□□□□ -0.46
SMPD4-218ENST00000482171 CD2APQ9Y5K6 639 aa12.19□□□□□ -0.46
SMPD4-218ENST00000482171 TACC3Q9Y6A5 838 aa12.19□□□□□ -0.46
SMPD4-218ENST00000482171 M0QZ92 97 aa12.19□□□□□ -0.46
SMPD4-218ENST00000482171 GUCY2CP25092 1073 aa12.19□□□□□ -0.46
SMPD4-218ENST00000482171 SLC8A3P57103 927 aa12.19□□□□□ -0.46
SMPD4-218ENST00000482171 TAOK1Q7L7X3 1001 aa12.19□□□□□ -0.46
SMPD4-218ENST00000482171 ARHGEF2Q92974 986 aaKnown RBP12.19□□□□□ -0.46
SMPD4-218ENST00000482171 ATP6V0A4Q9HBG4 840 aa12.19□□□□□ -0.46
SMPD4-218ENST00000482171 PSD3Q9NYI0 1048 aa12.19□□□□□ -0.46
SMPD4-218ENST00000482171 FAM198AQ9UFP1 575 aa12.19□□□□□ -0.46
SMPD4-218ENST00000482171 NFIBO00712 420 aa12.18□□□□□ -0.46
SMPD4-218ENST00000482171 WNT10BO00744 389 aa12.18□□□□□ -0.46
SMPD4-218ENST00000482171 RGL2O15211 777 aa12.18□□□□□ -0.46
SMPD4-218ENST00000482171 PALMO75781 387 aa12.18□□□□□ -0.46
SMPD4-218ENST00000482171 RPA1P27694 616 aa12.18□□□□□ -0.46
SMPD4-218ENST00000482171 SH2D3CQ8N5H7 860 aa12.18□□□□□ -0.46
SMPD4-218ENST00000482171 CCDC197Q8NCU1 140 aa12.18□□□□□ -0.46
SMPD4-218ENST00000482171 MCPH1Q8NEM0 835 aa12.18□□□□□ -0.46
SMPD4-218ENST00000482171 LCMT1Q9UIC8 334 aa12.18□□□□□ -0.46
SMPD4-218ENST00000482171 SASH3O75995 380 aa12.18□□□□□ -0.46
SMPD4-218ENST00000482171 ARP10275 920 aa12.18□□□□□ -0.46
SMPD4-218ENST00000482171 TFDP1Q14186 410 aa12.18□□□□□ -0.46
SMPD4-218ENST00000482171 DRAP1Q14919 205 aaPredicted RBP12.18□□□□□ -0.46
SMPD4-218ENST00000482171 FAM133BQ5BKY9 247 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms