RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 NSD3Q9BZ95 1437 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 TLDC2A0PJX2 215 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 PIK3R2O00459 728 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 TRIM27P14373 513 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 JUNDP17535 347 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 DDR2Q16832 855 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 PHF20Q9BVI0 1012 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 KATNAL1Q9BW62 490 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 CLSTN2Q9H4D0 955 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 SNX7Q9UNH6 387 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 ANKRD6Q9Y2G4 727 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 IPPQ9Y573 584 aa5.77□□□□□ -1.49
USF3-202ENST00000478658 BAG2O95816 211 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 MYCP01106 439 aaPredicted RBP5.76□□□□□ -1.49
USF3-202ENST00000478658 HUNKP57058 714 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 ARMCX4Q5H9R4 360 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 MYSM1Q5VVJ2 828 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 FBXW10Q5XX13 1052 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 LMBRD2Q68DH5 695 aaPredicted RBP5.76□□□□□ -1.49
USF3-202ENST00000478658 PGM2L1Q6PCE3 622 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 SZRD1Q7Z422 152 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 ATP8B4Q8TF62 1192 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 SAAL1Q96ER3 474 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 DCUN1D1Q96GG9 259 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 NLRP3Q96P20 1036 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 MNTQ99583 582 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 WDR19Q8NEZ3 1342 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 MLNP12872 115 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 HSD3B1P14060 373 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 ALOX15P16050 662 aaPredicted RBP5.76□□□□□ -1.49
USF3-202ENST00000478658 HSPA13P48723 471 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 CCDC142Q17RM4 750 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 ZNF658Q5TYW1 1059 aaPredicted RBP5.76□□□□□ -1.49
USF3-202ENST00000478658 CYP4Z1Q86W10 505 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 APPBP2Q92624 585 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 CMTM5Q96DZ9 223 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 SMURF2Q9HAU4 748 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 SAMSN1Q9NSI8 373 aaKnown RBP5.76□□□□□ -1.49
USF3-202ENST00000478658 KIAA1468Q9P260 1216 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 RNF123Q5XPI4 1314 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 ASB14A6NK59 587 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 IFRD1O00458 451 aaPredicted RBP5.76□□□□□ -1.49
USF3-202ENST00000478658 CCDC153Q494R4 210 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 DNAL1Q4LDG9 190 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 TMCO4Q5TGY1 634 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 ITPRIPL1Q6GPH6 555 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 TNS4Q8IZW8 715 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 UXS1Q8NBZ7 420 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 AKAP1Q92667 903 aaKnown RBP eCLIP5.76□□□□□ -1.49
USF3-202ENST00000478658 AGBL1Q96MI9 1066 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 NRBP2Q9NSY0 501 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 DDX28Q9NUL7 540 aaKnown RBP5.76□□□□□ -1.49
USF3-202ENST00000478658 TRMT112Q9UI30 125 aaKnown RBP5.76□□□□□ -1.49
USF3-202ENST00000478658 CDC23Q9UJX2 597 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 STOML2Q9UJZ1 356 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 NCKAP1Q9Y2A7 1128 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 EIF2AK4Q9P2K8 1649 aaKnown RBP5.76□□□□□ -1.49
USF3-202ENST00000478658 PARD3Q8TEW0 1356 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 SNAPC4Q5SXM2 1469 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 EIF4G3O43432 1585 aaKnown RBP5.76□□□□□ -1.49
USF3-202ENST00000478658 EXTL3O43909 919 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 BNC1Q01954 994 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 C1DQ13901 141 aaKnown RBP5.76□□□□□ -1.49
USF3-202ENST00000478658 DMC1Q14565 340 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 UBE3CQ15386 1083 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 KIF19Q2TAC6 998 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 CHURC1Q8WUH1 139 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 PBXIP1Q96AQ6 731 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 CLMNQ96JQ2 1002 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 PPP1R16BQ96T49 567 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 CEP44Q9C0F1 390 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 PANK3Q9H999 370 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 PRDM5Q9NQX1 630 aaPredicted RBP5.76□□□□□ -1.49
USF3-202ENST00000478658 CYP26B1Q9NR63 512 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 UBAP1Q9NZ09 502 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 NUTM2BA6NNL0 878 aaPredicted RBP5.76□□□□□ -1.49
USF3-202ENST00000478658 NUTM2EB1AL46 878 aaPredicted RBP5.76□□□□□ -1.49
USF3-202ENST00000478658 H7C1D1 291 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 SYT1P21579 422 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 MRPS35P82673 323 aaKnown RBP5.76□□□□□ -1.49
USF3-202ENST00000478658 NDUFAF6Q330K2 333 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 SLC9C2Q5TAH2 1124 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 HSDL2Q6YN16 418 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 MSANTD1Q6ZTZ1 278 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 NECTIN2Q92692 538 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 TSPAN17Q96FV3 270 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 INO80BQ9C086 356 aaPredicted RBP5.76□□□□□ -1.49
USF3-202ENST00000478658 DMTF1Q9Y222 760 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 ALG6Q9Y672 507 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 FLT1P17948 1338 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 ERICH3Q5RHP9 1530 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 PTPDC1A2A3K4 754 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 E5RI56 91 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 RIMBP2O15034 1052 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 CYBBP04839 570 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 SF3B3Q15393 1217 aaKnown RBP5.76□□□□□ -1.49
USF3-202ENST00000478658 MIGA2Q7L4E1 593 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 LINS1Q8NG48 757 aa5.76□□□□□ -1.49
USF3-202ENST00000478658 LRRC59Q96AG4 307 aaKnown RBP5.76□□□□□ -1.49
USF3-202ENST00000478658 PPCSQ9HAB8 311 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms