RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 DKC1O60832 514 aaKnown RBP eCLIP9.26□□□□□ -0.93
HDAC6-221ENST00000477561 MAFO75444 373 aaPredicted RBP9.26□□□□□ -0.93
HDAC6-221ENST00000477561 SLITRK3O94933 977 aa9.26□□□□□ -0.93
HDAC6-221ENST00000477561 GJB2P29033 226 aa9.26□□□□□ -0.93
HDAC6-221ENST00000477561 YWHABP31946 246 aaKnown RBP9.26□□□□□ -0.93
HDAC6-221ENST00000477561 TECP42680 631 aa9.26□□□□□ -0.93
HDAC6-221ENST00000477561 DNM2P50570 870 aa9.26□□□□□ -0.93
HDAC6-221ENST00000477561 BTG3Q14201 252 aaPredicted RBP9.26□□□□□ -0.93
HDAC6-221ENST00000477561 PAN2Q504Q3 1202 aaKnown RBP9.26□□□□□ -0.93
HDAC6-221ENST00000477561 EPC2Q52LR7 807 aa9.26□□□□□ -0.93
HDAC6-221ENST00000477561 XKR9Q5GH70 373 aa9.26□□□□□ -0.93
HDAC6-221ENST00000477561 MCTP1Q6DN14 999 aa9.26□□□□□ -0.93
HDAC6-221ENST00000477561 RHPN2Q8IUC4 686 aa9.26□□□□□ -0.93
HDAC6-221ENST00000477561 NOSTRINQ8IVI9 506 aa9.26□□□□□ -0.93
HDAC6-221ENST00000477561 SPRYD3Q8NCJ5 442 aa9.26□□□□□ -0.93
HDAC6-221ENST00000477561 FBXO22Q8NEZ5 403 aa9.26□□□□□ -0.93
HDAC6-221ENST00000477561 NLRP7Q8WX94 980 aa9.26□□□□□ -0.93
HDAC6-221ENST00000477561 TSPYL2Q9H2G4 693 aaPredicted RBP9.26□□□□□ -0.93
HDAC6-221ENST00000477561 ZSWIM4Q9H7M6 989 aa9.26□□□□□ -0.93
HDAC6-221ENST00000477561 CHMP5Q9NZZ3 219 aa9.26□□□□□ -0.93
HDAC6-221ENST00000477561 SUCLA2Q9P2R7 463 aaPredicted RBP9.26□□□□□ -0.93
HDAC6-221ENST00000477561 LRFN2Q9ULH4 789 aa9.26□□□□□ -0.93
HDAC6-221ENST00000477561 WDR81Q562E7 1941 aa9.25□□□□□ -0.93
HDAC6-221ENST00000477561 LOXHD1Q8IVV2 1947 aa9.25□□□□□ -0.93
HDAC6-221ENST00000477561 A0A087WZ62 844 aa9.25□□□□□ -0.93
HDAC6-221ENST00000477561 IGKV6-21A0A0C4DH24 114 aa9.25□□□□□ -0.93
HDAC6-221ENST00000477561 DGKIO75912 1065 aa9.25□□□□□ -0.93
HDAC6-221ENST00000477561 DARSP14868 501 aaKnown RBP9.25□□□□□ -0.93
HDAC6-221ENST00000477561 EIF4BP23588 611 aaKnown RBP9.25□□□□□ -0.93
HDAC6-221ENST00000477561 POLGP54098 1239 aaPredicted RBP9.25□□□□□ -0.93
HDAC6-221ENST00000477561 SKIV2LQ15477 1246 aaKnown RBP9.25□□□□□ -0.93
HDAC6-221ENST00000477561 TTC38Q5R3I4 469 aa9.25□□□□□ -0.93
HDAC6-221ENST00000477561 ODR4Q5SWX8 454 aa9.25□□□□□ -0.93
HDAC6-221ENST00000477561 FAM102BQ5T8I3 360 aa9.25□□□□□ -0.93
HDAC6-221ENST00000477561 OTUD6AQ7L8S5 288 aa9.25□□□□□ -0.93
HDAC6-221ENST00000477561 NPAS4Q8IUM7 802 aa9.25□□□□□ -0.93
HDAC6-221ENST00000477561 C4orf19Q8IY42 314 aa9.25□□□□□ -0.93
HDAC6-221ENST00000477561 TMEM192Q8IY95 271 aa9.25□□□□□ -0.93
HDAC6-221ENST00000477561 PIGOQ8TEQ8 1089 aa9.25□□□□□ -0.93
HDAC6-221ENST00000477561 TMEM143Q96AN5 459 aa9.25□□□□□ -0.93
HDAC6-221ENST00000477561 ZNF689Q96CS4 500 aaPredicted RBP9.25□□□□□ -0.93
HDAC6-221ENST00000477561 NLRP4Q96MN2 994 aa9.25□□□□□ -0.93
HDAC6-221ENST00000477561 HSD17B14Q9BPX1 270 aa9.25□□□□□ -0.93
HDAC6-221ENST00000477561 FDXACB1Q9BRP7 624 aaPredicted RBP9.25□□□□□ -0.93
HDAC6-221ENST00000477561 RGS18Q9NS28 235 aa9.25□□□□□ -0.93
HDAC6-221ENST00000477561 NOL7Q9UMY1 257 aaKnown RBP9.25□□□□□ -0.93
HDAC6-221ENST00000477561 PCDHB7Q9Y5E2 793 aa9.25□□□□□ -0.93
HDAC6-221ENST00000477561 MYO9BQ13459 2157 aa9.24□□□□□ -0.93
HDAC6-221ENST00000477561 C9IYK1 514 aa9.24□□□□□ -0.93
HDAC6-221ENST00000477561 H3BQV1 296 aa9.24□□□□□ -0.93
HDAC6-221ENST00000477561 CSPG5O95196 566 aa9.24□□□□□ -0.93
HDAC6-221ENST00000477561 OR52Z1P0C646 297 aa9.24□□□□□ -0.93
HDAC6-221ENST00000477561 STAG3L1P0CL83 205 aa9.24□□□□□ -0.93
HDAC6-221ENST00000477561 SRGAP2CP0DJJ0 459 aa9.24□□□□□ -0.93
HDAC6-221ENST00000477561 ZSCAN20P17040 1043 aaPredicted RBP9.24□□□□□ -0.93
HDAC6-221ENST00000477561 POU3F3P20264 500 aaPredicted RBP9.24□□□□□ -0.93
HDAC6-221ENST00000477561 U2AF2P26368 475 aaKnown RBP eCLIP9.24□□□□□ -0.93
HDAC6-221ENST00000477561 CTNNB1P35222 781 aa9.24□□□□□ -0.93
HDAC6-221ENST00000477561 SARSP49591 514 aaKnown RBP9.24□□□□□ -0.93
HDAC6-221ENST00000477561 TOB1P50616 345 aaPredicted RBP9.24□□□□□ -0.93
HDAC6-221ENST00000477561 GPM6BQ13491 265 aa9.24□□□□□ -0.93
HDAC6-221ENST00000477561 DSC3Q14574 896 aa9.24□□□□□ -0.93
HDAC6-221ENST00000477561 SLC24A5Q71RS6 500 aa9.24□□□□□ -0.93
HDAC6-221ENST00000477561 CRIPAKQ8N1N5 446 aa9.24□□□□□ -0.93
HDAC6-221ENST00000477561 SLC7A3Q8WY07 619 aa9.24□□□□□ -0.93
HDAC6-221ENST00000477561 GCOM2Q9BZD3 368 aaPredicted RBP9.24□□□□□ -0.93
HDAC6-221ENST00000477561 DHX33Q9H6R0 707 aaKnown RBP9.24□□□□□ -0.93
HDAC6-221ENST00000477561 RC3H2Q9HBD1 1191 aaKnown RBP9.24□□□□□ -0.93
HDAC6-221ENST00000477561 SMC3Q9UQE7 1217 aa9.24□□□□□ -0.93
HDAC6-221ENST00000477561 KIF3AQ9Y496 699 aa9.24□□□□□ -0.93
HDAC6-221ENST00000477561 PCDHB6Q9Y5E3 794 aa9.24□□□□□ -0.93
HDAC6-221ENST00000477561 A0A0C4DFX4 3053 aa9.24□□□□□ -0.93
HDAC6-221ENST00000477561 ADGRA3Q8IWK6 1321 aa9.24□□□□□ -0.93
HDAC6-221ENST00000477561 TRANK1O15050 2925 aa9.24□□□□□ -0.93
HDAC6-221ENST00000477561 REV3LO60673 3130 aa9.23□□□□□ -0.93
HDAC6-221ENST00000477561 TBKBP1A7MCY6 615 aa9.23□□□□□ -0.93
HDAC6-221ENST00000477561 DLL1O00548 723 aa9.23□□□□□ -0.93
HDAC6-221ENST00000477561 MED24O75448 989 aa9.23□□□□□ -0.93
HDAC6-221ENST00000477561 LINC00271P0C7V0 271 aa9.23□□□□□ -0.93
HDAC6-221ENST00000477561 SPATA31C1P0DKV0 1188 aa9.23□□□□□ -0.93
HDAC6-221ENST00000477561 FGFR1P11362 822 aa9.23□□□□□ -0.93
HDAC6-221ENST00000477561 PDIA4P13667 645 aaKnown RBP9.23□□□□□ -0.93
HDAC6-221ENST00000477561 BMPR1AP36894 532 aa9.23□□□□□ -0.93
HDAC6-221ENST00000477561 RFC5P40937 340 aa9.23□□□□□ -0.93
HDAC6-221ENST00000477561 NUCB2P80303 420 aa9.23□□□□□ -0.93
HDAC6-221ENST00000477561 EMC2Q15006 297 aa9.23□□□□□ -0.93
HDAC6-221ENST00000477561 MAEAQ7L5Y9 396 aa9.23□□□□□ -0.93
HDAC6-221ENST00000477561 CATSPER3Q86XQ3 398 aa9.23□□□□□ -0.93
HDAC6-221ENST00000477561 C4orf32Q8N8J7 132 aa9.23□□□□□ -0.93
HDAC6-221ENST00000477561 RNF169Q8NCN4 708 aa9.23□□□□□ -0.93
HDAC6-221ENST00000477561 PRPF31Q8WWY3 499 aaKnown RBP9.23□□□□□ -0.93
HDAC6-221ENST00000477561 CCDC43Q96MW1 224 aaKnown RBP9.23□□□□□ -0.93
HDAC6-221ENST00000477561 SAMD11Q96NU1 681 aa9.23□□□□□ -0.93
HDAC6-221ENST00000477561 JPH2Q9BR39 696 aaPredicted RBP9.23□□□□□ -0.93
HDAC6-221ENST00000477561 ATP6V0A4Q9HBG4 840 aa9.23□□□□□ -0.93
HDAC6-221ENST00000477561 C1orf112Q9NSG2 853 aa9.23□□□□□ -0.93
HDAC6-221ENST00000477561 HCSTQ9UBK5 93 aa9.23□□□□□ -0.93
HDAC6-221ENST00000477561 COL4A3BPQ9Y5P4 624 aa9.23□□□□□ -0.93
HDAC6-221ENST00000477561 MRPL42Q9Y6G3 142 aaKnown RBP9.23□□□□□ -0.93
HDAC6-221ENST00000477561 SPTBN5Q9NRC6 3674 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms