RNA–Protein interactions for RNA: ENST00000471261.2

PPP1R3F-204, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 3

Gene PPP1R3F, Length 503 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-204ENST00000471261 GTPBP6O43824 516 aaPredicted RBP14.09□□□□□ -0.15
PPP1R3F-204ENST00000471261 CSDE1O75534 798 aaKnown RBP14.09□□□□□ -0.15
PPP1R3F-204ENST00000471261 STAG3L1P0CL83 205 aa14.09□□□□□ -0.15
PPP1R3F-204ENST00000471261 DARSP14868 501 aaKnown RBP14.09□□□□□ -0.15
PPP1R3F-204ENST00000471261 FGFR4P22455 802 aa14.09□□□□□ -0.15
PPP1R3F-204ENST00000471261 RFC5P40937 340 aa14.09□□□□□ -0.15
PPP1R3F-204ENST00000471261 TOB1P50616 345 aaPredicted RBP14.09□□□□□ -0.15
PPP1R3F-204ENST00000471261 CDC42EP1Q00587 391 aa14.09□□□□□ -0.15
PPP1R3F-204ENST00000471261 EMC2Q15006 297 aa14.09□□□□□ -0.15
PPP1R3F-204ENST00000471261 KSR1Q8IVT5 923 aa14.09□□□□□ -0.15
PPP1R3F-204ENST00000471261 EXOC8Q8IYI6 725 aa14.09□□□□□ -0.15
PPP1R3F-204ENST00000471261 FIBCD1Q8N539 461 aa14.09□□□□□ -0.15
PPP1R3F-204ENST00000471261 ERMNQ8TAM6 284 aa14.09□□□□□ -0.15
PPP1R3F-204ENST00000471261 SP7Q8TDD2 431 aaPredicted RBP14.09□□□□□ -0.15
PPP1R3F-204ENST00000471261 PIGOQ8TEQ8 1089 aa14.09□□□□□ -0.15
PPP1R3F-204ENST00000471261 TMEM143Q96AN5 459 aa14.09□□□□□ -0.15
PPP1R3F-204ENST00000471261 C17orf80Q9BSJ5 609 aa14.09□□□□□ -0.15
PPP1R3F-204ENST00000471261 GCOM2Q9BZD3 368 aaPredicted RBP14.09□□□□□ -0.15
PPP1R3F-204ENST00000471261 PPME1Q9Y570 386 aa14.09□□□□□ -0.15
PPP1R3F-204ENST00000471261 A0A087WWV3 80 aa14.08□□□□□ -0.16
PPP1R3F-204ENST00000471261 A0A087WZ62 844 aa14.08□□□□□ -0.16
PPP1R3F-204ENST00000471261 SARSP49591 514 aaKnown RBP14.08□□□□□ -0.16
PPP1R3F-204ENST00000471261 ERVK-21P61565 698 aa14.08□□□□□ -0.16
PPP1R3F-204ENST00000471261 PTGDRQ13258 359 aa14.08□□□□□ -0.16
PPP1R3F-204ENST00000471261 GRB10Q13322 594 aa14.08□□□□□ -0.16
PPP1R3F-204ENST00000471261 BTG3Q14201 252 aaPredicted RBP14.08□□□□□ -0.16
PPP1R3F-204ENST00000471261 NPAS4Q8IUM7 802 aa14.08□□□□□ -0.16
PPP1R3F-204ENST00000471261 FBXO22Q8NEZ5 403 aa14.08□□□□□ -0.16
PPP1R3F-204ENST00000471261 PSPC1Q8WXF1 523 aaKnown RBP14.08□□□□□ -0.16
PPP1R3F-204ENST00000471261 MTRQ99707 1265 aa14.08□□□□□ -0.16
PPP1R3F-204ENST00000471261 FDXACB1Q9BRP7 624 aaPredicted RBP14.08□□□□□ -0.16
PPP1R3F-204ENST00000471261 DHX33Q9H6R0 707 aaKnown RBP14.08□□□□□ -0.16
PPP1R3F-204ENST00000471261 RGS18Q9NS28 235 aa14.08□□□□□ -0.16
PPP1R3F-204ENST00000471261 C1orf112Q9NSG2 853 aa14.08□□□□□ -0.16
PPP1R3F-204ENST00000471261 PCDHB7Q9Y5E2 793 aa14.08□□□□□ -0.16
PPP1R3F-204ENST00000471261 COL4A3BPQ9Y5P4 624 aa14.08□□□□□ -0.16
PPP1R3F-204ENST00000471261 ADGRA3Q8IWK6 1321 aa14.08□□□□□ -0.16
PPP1R3F-204ENST00000471261 TRANK1O15050 2925 aa14.08□□□□□ -0.16
PPP1R3F-204ENST00000471261 WDR81Q562E7 1941 aa14.07□□□□□ -0.16
PPP1R3F-204ENST00000471261 MED24O75448 989 aa14.07□□□□□ -0.16
PPP1R3F-204ENST00000471261 DGKIO75912 1065 aa14.07□□□□□ -0.16
PPP1R3F-204ENST00000471261 LYPLA2O95372 231 aa14.07□□□□□ -0.16
PPP1R3F-204ENST00000471261 SRGAP2CP0DJJ0 459 aa14.07□□□□□ -0.16
PPP1R3F-204ENST00000471261 SPATA31C1P0DKV0 1188 aa14.07□□□□□ -0.16
PPP1R3F-204ENST00000471261 ZSCAN20P17040 1043 aaPredicted RBP14.07□□□□□ -0.16
PPP1R3F-204ENST00000471261 CUL4AQ13619 759 aa14.07□□□□□ -0.16
PPP1R3F-204ENST00000471261 PAN2Q504Q3 1202 aaKnown RBP14.07□□□□□ -0.16
PPP1R3F-204ENST00000471261 RILPL1Q5EBL4 403 aa14.07□□□□□ -0.16
PPP1R3F-204ENST00000471261 POTEGQ6S5H5 508 aa14.07□□□□□ -0.16
PPP1R3F-204ENST00000471261 SLC24A5Q71RS6 500 aa14.07□□□□□ -0.16
PPP1R3F-204ENST00000471261 ZNF410Q86VK4 478 aa14.07□□□□□ -0.16
PPP1R3F-204ENST00000471261 CATSPER3Q86XQ3 398 aa14.07□□□□□ -0.16
PPP1R3F-204ENST00000471261 C4orf32Q8N8J7 132 aa14.07□□□□□ -0.16
PPP1R3F-204ENST00000471261 PRPF31Q8WWY3 499 aaKnown RBP14.07□□□□□ -0.16
PPP1R3F-204ENST00000471261 ANKEF1Q9NU02 776 aa14.07□□□□□ -0.16
PPP1R3F-204ENST00000471261 FOXD4L1Q9NU39 408 aa14.07□□□□□ -0.16
PPP1R3F-204ENST00000471261 VPS37CA5D8V6 355 aaPredicted RBP14.06□□□□□ -0.16
PPP1R3F-204ENST00000471261 GAS2O43903 313 aaKnown RBP14.06□□□□□ -0.16
PPP1R3F-204ENST00000471261 USO1O60763 962 aaKnown RBP14.06□□□□□ -0.16
PPP1R3F-204ENST00000471261 SFPQP23246 707 aaKnown RBP eCLIP14.06□□□□□ -0.16
PPP1R3F-204ENST00000471261 CTNNB1P35222 781 aa14.06□□□□□ -0.16
PPP1R3F-204ENST00000471261 RARRES1P49788 294 aa14.06□□□□□ -0.16
PPP1R3F-204ENST00000471261 GATMP50440 423 aa14.06□□□□□ -0.16
PPP1R3F-204ENST00000471261 FXR2P51116 673 aaKnown RBP eCLIP14.06□□□□□ -0.16
PPP1R3F-204ENST00000471261 LAMTOR4Q0VGL1 99 aa14.06□□□□□ -0.16
PPP1R3F-204ENST00000471261 SKIV2LQ15477 1246 aaKnown RBP14.06□□□□□ -0.16
PPP1R3F-204ENST00000471261 EPC2Q52LR7 807 aa14.06□□□□□ -0.16
PPP1R3F-204ENST00000471261 HAUS3Q68CZ6 603 aa14.06□□□□□ -0.16
PPP1R3F-204ENST00000471261 TMEM192Q8IY95 271 aa14.06□□□□□ -0.16
PPP1R3F-204ENST00000471261 RNF169Q8NCN4 708 aa14.06□□□□□ -0.16
PPP1R3F-204ENST00000471261 TCP11Q8WWU5 503 aa14.06□□□□□ -0.16
PPP1R3F-204ENST00000471261 ZNF689Q96CS4 500 aaPredicted RBP14.06□□□□□ -0.16
PPP1R3F-204ENST00000471261 POLR3CQ9BUI4 534 aaPredicted RBP14.06□□□□□ -0.16
PPP1R3F-204ENST00000471261 RAB34Q9BZG1 259 aa14.06□□□□□ -0.16
PPP1R3F-204ENST00000471261 INO80BQ9C086 356 aaPredicted RBP14.06□□□□□ -0.16
PPP1R3F-204ENST00000471261 ATP6V0A4Q9HBG4 840 aa14.06□□□□□ -0.16
PPP1R3F-204ENST00000471261 TUFT1Q9NNX1 390 aa14.06□□□□□ -0.16
PPP1R3F-204ENST00000471261 RNF216Q9NWF9 866 aaPredicted RBP14.06□□□□□ -0.16
PPP1R3F-204ENST00000471261 LRWD1Q9UFC0 647 aa14.06□□□□□ -0.16
PPP1R3F-204ENST00000471261 MTCH2Q9Y6C9 303 aa14.06□□□□□ -0.16
PPP1R3F-204ENST00000471261 TBKBP1A7MCY6 615 aa14.05□□□□□ -0.16
PPP1R3F-204ENST00000471261 C9IYK1 514 aa14.05□□□□□ -0.16
PPP1R3F-204ENST00000471261 K7ELQ4 463 aaPredicted RBP14.05□□□□□ -0.16
PPP1R3F-204ENST00000471261 LAD1O00515 517 aa14.05□□□□□ -0.16
PPP1R3F-204ENST00000471261 LPXNO60711 386 aa14.05□□□□□ -0.16
PPP1R3F-204ENST00000471261 DGAT1O75907 488 aa14.05□□□□□ -0.16
PPP1R3F-204ENST00000471261 PDCP20941 246 aa14.05□□□□□ -0.16
PPP1R3F-204ENST00000471261 CCT6AP40227 531 aaKnown RBP14.05□□□□□ -0.16
PPP1R3F-204ENST00000471261 DSC3Q14574 896 aa14.05□□□□□ -0.16
PPP1R3F-204ENST00000471261 DTHD1Q6ZMT9 781 aa14.05□□□□□ -0.16
PPP1R3F-204ENST00000471261 FAM43BQ6ZT52 329 aaPredicted RBP14.05□□□□□ -0.16
PPP1R3F-204ENST00000471261 MAEAQ7L5Y9 396 aa14.05□□□□□ -0.16
PPP1R3F-204ENST00000471261 CATSPER4Q7RTX7 472 aa14.05□□□□□ -0.16
PPP1R3F-204ENST00000471261 FERMT3Q86UX7 667 aa14.05□□□□□ -0.16
PPP1R3F-204ENST00000471261 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.05□□□□□ -0.16
PPP1R3F-204ENST00000471261 CRIPAKQ8N1N5 446 aa14.05□□□□□ -0.16
PPP1R3F-204ENST00000471261 RNF149Q8NC42 400 aa14.05□□□□□ -0.16
PPP1R3F-204ENST00000471261 SAMD11Q96NU1 681 aa14.05□□□□□ -0.16
PPP1R3F-204ENST00000471261 NACC1Q96RE7 527 aa14.05□□□□□ -0.16
PPP1R3F-204ENST00000471261 RC3H2Q9HBD1 1191 aaKnown RBP14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms