RNA–Protein interactions for RNA: ENST00000466707.1

ABCA2-213, Transcript of ATP binding cassette subfamily A member 2, human

TSL 2

Gene ABCA2, Length 555 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-213	ENST00000466707	LRRC55	Q6ZSA7	311 aa		28.66	■■■□□ 2.18
ABCA2-213	ENST00000466707	TRIM22	Q8IYM9	498 aa		28.66	■■■□□ 2.18
ABCA2-213	ENST00000466707	THNSL1	Q8IYQ7	743 aa		28.66	■■■□□ 2.18
ABCA2-213	ENST00000466707	VN1R2	Q8NFZ6	395 aa		28.66	■■■□□ 2.18
ABCA2-213	ENST00000466707	CASD1	Q96PB1	797 aa		28.66	■■■□□ 2.18
ABCA2-213	ENST00000466707	UPF3B	Q9BZI7	483 aa	Known RBP	28.66	■■■□□ 2.18
ABCA2-213	ENST00000466707	NRBP2	Q9NSY0	501 aa		28.66	■■■□□ 2.18
ABCA2-213	ENST00000466707	TMEM150B	A6NC51	233 aa		28.65	■■■□□ 2.18
ABCA2-213	ENST00000466707	PER2	O15055	1255 aa		28.65	■■■□□ 2.18
ABCA2-213	ENST00000466707	TMOD1	P28289	359 aa		28.65	■■■□□ 2.18
ABCA2-213	ENST00000466707	COASY	Q13057	564 aa		28.65	■■■□□ 2.18
ABCA2-213	ENST00000466707	TARBP2	Q15633	366 aa	Known RBP	28.65	■■■□□ 2.18
ABCA2-213	ENST00000466707		Q4G0T1	1027 aa		28.65	■■■□□ 2.18
ABCA2-213	ENST00000466707	B3GNT9	Q6UX72	402 aa		28.65	■■■□□ 2.18
ABCA2-213	ENST00000466707	POP1	Q99575	1024 aa	Known RBP	28.65	■■■□□ 2.18
ABCA2-213	ENST00000466707	TMEM117	Q9H0C3	514 aa		28.65	■■■□□ 2.18
ABCA2-213	ENST00000466707	TLE6	Q9H808	572 aa		28.65	■■■□□ 2.18
ABCA2-213	ENST00000466707	FSCN2	O14926	492 aa		28.64	■■■□□ 2.18
ABCA2-213	ENST00000466707	LAG3	P18627	525 aa		28.64	■■■□□ 2.18
ABCA2-213	ENST00000466707	STK3	Q13188	491 aa		28.64	■■■□□ 2.18
ABCA2-213	ENST00000466707	MIER3	Q7Z3K6	550 aa		28.64	■■■□□ 2.18
ABCA2-213	ENST00000466707	ECHDC2	Q86YB7	292 aa		28.64	■■■□□ 2.18
ABCA2-213	ENST00000466707	BLID	Q8IZY5	108 aa		28.64	■■■□□ 2.18
ABCA2-213	ENST00000466707	MICAL1	Q8TDZ2	1067 aa		28.64	■■■□□ 2.18
ABCA2-213	ENST00000466707	MUTYH	Q9UIF7	546 aa		28.64	■■■□□ 2.18
ABCA2-213	ENST00000466707	CYP46A1	Q9Y6A2	500 aa		28.64	■■■□□ 2.18
ABCA2-213	ENST00000466707	TRIO	O75962	3097 aa		28.63	■■■□□ 2.17
ABCA2-213	ENST00000466707	CYP3A7-CYP3A51P	A0A087WV96	503 aa		28.63	■■■□□ 2.17
ABCA2-213	ENST00000466707	STBD1	O95210	358 aa		28.63	■■■□□ 2.17
ABCA2-213	ENST00000466707	DEXI	O95424	95 aa		28.63	■■■□□ 2.17
ABCA2-213	ENST00000466707	DARS	P14868	501 aa	Known RBP	28.63	■■■□□ 2.17
ABCA2-213	ENST00000466707	CYP3A7	P24462	503 aa		28.63	■■■□□ 2.17
ABCA2-213	ENST00000466707	PBX3	P40426	434 aa		28.63	■■■□□ 2.17
ABCA2-213	ENST00000466707	TBC1D8B	Q0IIM8	1120 aa		28.63	■■■□□ 2.17
ABCA2-213	ENST00000466707	RNF135	Q8IUD6	432 aa		28.63	■■■□□ 2.17
ABCA2-213	ENST00000466707	DAGLB	Q8NCG7	672 aa		28.63	■■■□□ 2.17
ABCA2-213	ENST00000466707	ETNPPL	Q8TBG4	499 aa		28.63	■■■□□ 2.17
ABCA2-213	ENST00000466707	ZNF274	Q96GC6	653 aa	Predicted RBP	28.63	■■■□□ 2.17
ABCA2-213	ENST00000466707	CEP89	Q96ST8	783 aa		28.63	■■■□□ 2.17
ABCA2-213	ENST00000466707	SH2D3A	Q9BRG2	576 aa		28.63	■■■□□ 2.17
ABCA2-213	ENST00000466707	SEPT9	Q9UHD8	586 aa	Predicted RBP	28.63	■■■□□ 2.17
ABCA2-213	ENST00000466707	MUC6	Q6W4X9	2439 aa		28.62	■■■□□ 2.17
ABCA2-213	ENST00000466707	CSDE1	O75534	798 aa	Known RBP	28.62	■■■□□ 2.17
ABCA2-213	ENST00000466707	DUSP6	Q16828	381 aa		28.62	■■■□□ 2.17
ABCA2-213	ENST00000466707	CSPP1	Q1MSJ5	1256 aa		28.62	■■■□□ 2.17
ABCA2-213	ENST00000466707	MTERF2	Q49AM1	385 aa		28.62	■■■□□ 2.17
ABCA2-213	ENST00000466707	CLLU1OS	Q5K130	101 aa		28.62	■■■□□ 2.17
ABCA2-213	ENST00000466707	RDM1	Q8NG50	284 aa		28.62	■■■□□ 2.17
ABCA2-213	ENST00000466707	MBOAT7	Q96N66	472 aa		28.62	■■■□□ 2.17
ABCA2-213	ENST00000466707	SCLT1	Q96NL6	688 aa		28.62	■■■□□ 2.17
ABCA2-213	ENST00000466707	C22orf23	Q9BZE7	217 aa		28.62	■■■□□ 2.17
ABCA2-213	ENST00000466707	USP15	Q9Y4E8	981 aa	Predicted RBP	28.62	■■■□□ 2.17
ABCA2-213	ENST00000466707	CPLX1	O14810	134 aa		28.61	■■■□□ 2.17
ABCA2-213	ENST00000466707	EPB41L2	O43491	1005 aa	Known RBP	28.61	■■■□□ 2.17
ABCA2-213	ENST00000466707	ZSCAN20	P17040	1043 aa	Predicted RBP	28.61	■■■□□ 2.17
ABCA2-213	ENST00000466707	ATF7	P17544	494 aa	Predicted RBP	28.61	■■■□□ 2.17
ABCA2-213	ENST00000466707	HOXD11	P31277	338 aa	Predicted RBP	28.61	■■■□□ 2.17
ABCA2-213	ENST00000466707	PLPP4	Q5VZY2	271 aa		28.61	■■■□□ 2.17
ABCA2-213	ENST00000466707	RNF169	Q8NCN4	708 aa		28.61	■■■□□ 2.17
ABCA2-213	ENST00000466707	NLRP7	Q8WX94	980 aa		28.61	■■■□□ 2.17
ABCA2-213	ENST00000466707	TM6SF1	Q9BZW5	370 aa		28.61	■■■□□ 2.17
ABCA2-213	ENST00000466707	HERC4	Q5GLZ8	1057 aa	Predicted RBP	28.6	■■■□□ 2.17
ABCA2-213	ENST00000466707	KCNT2	Q6UVM3	1135 aa		28.6	■■■□□ 2.17
ABCA2-213	ENST00000466707	ZNF598	Q86UK7	904 aa	Known RBP	28.6	■■■□□ 2.17
ABCA2-213	ENST00000466707	LRRC43	Q8N309	656 aa		28.6	■■■□□ 2.17
ABCA2-213	ENST00000466707	MRPS27	Q92552	414 aa	Known RBP	28.6	■■■□□ 2.17
ABCA2-213	ENST00000466707	NIFK	Q9BYG3	293 aa	Known RBP	28.6	■■■□□ 2.17
ABCA2-213	ENST00000466707	TECTA	O75443	2155 aa		28.6	■■■□□ 2.17
ABCA2-213	ENST00000466707	HOXA2	O43364	376 aa		28.59	■■■□□ 2.17
ABCA2-213	ENST00000466707	SLC37A4	O43826	429 aa		28.59	■■■□□ 2.17
ABCA2-213	ENST00000466707	DTNB	O60941	627 aa		28.59	■■■□□ 2.17
ABCA2-213	ENST00000466707	PLCB3	Q01970	1234 aa		28.59	■■■□□ 2.17
ABCA2-213	ENST00000466707	INF2	Q27J81	1249 aa		28.59	■■■□□ 2.17
ABCA2-213	ENST00000466707	XKR3	Q5GH77	459 aa		28.59	■■■□□ 2.17
ABCA2-213	ENST00000466707	ZNF710	Q8N1W2	664 aa		28.59	■■■□□ 2.17
ABCA2-213	ENST00000466707	KCNJ14	Q9UNX9	436 aa		28.59	■■■□□ 2.17
ABCA2-213	ENST00000466707	LZTS1	Q9Y250	596 aa		28.59	■■■□□ 2.17
ABCA2-213	ENST00000466707	IGKV6-21	A0A0C4DH24	114 aa		28.58	■■■□□ 2.17
ABCA2-213	ENST00000466707	MOXD1	Q6UVY6	613 aa		28.58	■■■□□ 2.17
ABCA2-213	ENST00000466707	ABI1	Q8IZP0	508 aa		28.58	■■■□□ 2.17
ABCA2-213	ENST00000466707	HELQ	Q8TDG4	1101 aa		28.58	■■■□□ 2.17
ABCA2-213	ENST00000466707	ZNF558	Q96NG5	402 aa		28.58	■■■□□ 2.17
ABCA2-213	ENST00000466707	ZNF318	Q5VUA4	2279 aa		28.58	■■■□□ 2.17
ABCA2-213	ENST00000466707		A0A0U1RQF3	1178 aa		28.57	■■■□□ 2.16
ABCA2-213	ENST00000466707	HIDE1	A8MVS5	230 aa		28.57	■■■□□ 2.16
ABCA2-213	ENST00000466707	KCNC3	Q14003	757 aa		28.57	■■■□□ 2.16
ABCA2-213	ENST00000466707	NONO	Q15233	471 aa	Known RBP eCLIP	28.57	■■■□□ 2.16
ABCA2-213	ENST00000466707	PDE12	Q6L8Q7	609 aa	Known RBP	28.57	■■■□□ 2.16
ABCA2-213	ENST00000466707	HFE2	Q6ZVN8	426 aa		28.57	■■■□□ 2.16
ABCA2-213	ENST00000466707	CDCA3	Q99618	268 aa	Predicted RBP	28.57	■■■□□ 2.16
ABCA2-213	ENST00000466707	TCF25	Q9BQ70	676 aa		28.57	■■■□□ 2.16
ABCA2-213	ENST00000466707	ENTPD7	Q9NQZ7	604 aa		28.57	■■■□□ 2.16
ABCA2-213	ENST00000466707	DDX25	Q9UHL0	483 aa	Known RBP	28.57	■■■□□ 2.16
ABCA2-213	ENST00000466707	LOC730098	B7Z3J9	87 aa		28.56	■■■□□ 2.16
ABCA2-213	ENST00000466707	EML1	O00423	815 aa		28.56	■■■□□ 2.16
ABCA2-213	ENST00000466707	PLA2G4F	Q68DD2	849 aa		28.56	■■■□□ 2.16
ABCA2-213	ENST00000466707	SUSD6	Q92537	303 aa		28.56	■■■□□ 2.16
ABCA2-213	ENST00000466707	PDRG1	Q9NUG6	133 aa		28.56	■■■□□ 2.16
ABCA2-213	ENST00000466707		A0A087WZ62	844 aa		28.55	■■■□□ 2.16
ABCA2-213	ENST00000466707	SCRN1	Q12765	414 aa		28.55	■■■□□ 2.16

Retrieved 100 of 20,778 RNA–protein pairs in 148.4 ms