RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 TSR2Q969E8 191 aaKnown RBP5.75□□□□□ -1.49
HMGB1P16-201ENST00000447155 SIGLEC10Q96LC7 697 aa5.75□□□□□ -1.49
HMGB1P16-201ENST00000447155 ZSWIM3Q96MP5 696 aa5.75□□□□□ -1.49
HMGB1P16-201ENST00000447155 RHOBTB2Q9BYZ6 727 aa5.75□□□□□ -1.49
HMGB1P16-201ENST00000447155 KCTD10Q9H3F6 313 aa5.75□□□□□ -1.49
HMGB1P16-201ENST00000447155 MTG2Q9H4K7 406 aa5.75□□□□□ -1.49
HMGB1P16-201ENST00000447155 EDARQ9UNE0 448 aa5.75□□□□□ -1.49
HMGB1P16-201ENST00000447155 GIT1Q9Y2X7 761 aa5.75□□□□□ -1.49
HMGB1P16-201ENST00000447155 OPHN1O60890 802 aa5.74□□□□□ -1.49
HMGB1P16-201ENST00000447155 PCDH8O95206 1070 aa5.74□□□□□ -1.49
HMGB1P16-201ENST00000447155 LPLP06858 475 aa5.74□□□□□ -1.49
HMGB1P16-201ENST00000447155 VCAM1P19320 739 aa5.74□□□□□ -1.49
HMGB1P16-201ENST00000447155 GLDCP23378 1020 aa5.74□□□□□ -1.49
HMGB1P16-201ENST00000447155 GPR15P49685 360 aa5.74□□□□□ -1.49
HMGB1P16-201ENST00000447155 SLC5A3P53794 718 aa5.74□□□□□ -1.49
HMGB1P16-201ENST00000447155 LGALS4P56470 323 aa5.74□□□□□ -1.49
HMGB1P16-201ENST00000447155 MAP3K12Q12852 859 aa5.74□□□□□ -1.49
HMGB1P16-201ENST00000447155 SPIDRQ14159 915 aa5.74□□□□□ -1.49
HMGB1P16-201ENST00000447155 ODF1Q14990 250 aa5.74□□□□□ -1.49
HMGB1P16-201ENST00000447155 MUM1Q2TAK8 710 aa5.74□□□□□ -1.49
HMGB1P16-201ENST00000447155 WDR72Q3MJ13 1102 aa5.74□□□□□ -1.49
HMGB1P16-201ENST00000447155 PHF19Q5T6S3 580 aa5.74□□□□□ -1.49
HMGB1P16-201ENST00000447155 FAM102BQ5T8I3 360 aa5.74□□□□□ -1.49
HMGB1P16-201ENST00000447155 NOL8Q76FK4 1167 aaKnown RBP5.74□□□□□ -1.49
HMGB1P16-201ENST00000447155 BMP8AQ7Z5Y6 402 aa5.74□□□□□ -1.49
HMGB1P16-201ENST00000447155 LYSMD2Q8IV50 215 aa5.74□□□□□ -1.49
HMGB1P16-201ENST00000447155 CMTR2Q8IYT2 770 aaKnown RBP5.74□□□□□ -1.49
HMGB1P16-201ENST00000447155 OR14C36Q8NHC7 312 aa5.74□□□□□ -1.49
HMGB1P16-201ENST00000447155 AUTS2Q8WXX7 1259 aa5.74□□□□□ -1.49
HMGB1P16-201ENST00000447155 JADE3Q92613 823 aa5.74□□□□□ -1.49
HMGB1P16-201ENST00000447155 ZBTB8AQ96BR9 441 aa5.74□□□□□ -1.49
HMGB1P16-201ENST00000447155 TEKT5Q96M29 485 aa5.74□□□□□ -1.49
HMGB1P16-201ENST00000447155 PRDM12Q9H4Q4 367 aa5.74□□□□□ -1.49
HMGB1P16-201ENST00000447155 FTSJ1Q9UET6 329 aa5.74□□□□□ -1.49
HMGB1P16-201ENST00000447155 DPP7Q9UHL4 492 aa5.74□□□□□ -1.49
HMGB1P16-201ENST00000447155 PRSS50Q9UI38 385 aa5.74□□□□□ -1.49
HMGB1P16-201ENST00000447155 CROTQ9UKG9 612 aa5.74□□□□□ -1.49
HMGB1P16-201ENST00000447155 ANKRD6Q9Y2G4 727 aa5.74□□□□□ -1.49
HMGB1P16-201ENST00000447155 PCDHB6Q9Y5E3 794 aa5.74□□□□□ -1.49
HMGB1P16-201ENST00000447155 IRAK3Q9Y616 596 aa5.74□□□□□ -1.49
HMGB1P16-201ENST00000447155 CUTAO60888 179 aa5.73□□□□□ -1.49
HMGB1P16-201ENST00000447155 U2AF1L5P0DN76 240 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P16-201ENST00000447155 OSMP13725 252 aa5.73□□□□□ -1.49
HMGB1P16-201ENST00000447155 HTRA3P83110 453 aa5.73□□□□□ -1.49
HMGB1P16-201ENST00000447155 U2AF1Q01081 240 aaKnown RBP eCLIP5.73□□□□□ -1.49
HMGB1P16-201ENST00000447155 CD83Q01151 205 aa5.73□□□□□ -1.49
HMGB1P16-201ENST00000447155 TRIM25Q14258 630 aaKnown RBP5.73□□□□□ -1.49
HMGB1P16-201ENST00000447155 RTP5Q14D33 572 aa5.73□□□□□ -1.49
HMGB1P16-201ENST00000447155 CCDC178Q5BJE1 867 aa5.73□□□□□ -1.49
HMGB1P16-201ENST00000447155 NXNQ6DKJ4 435 aa5.73□□□□□ -1.49
HMGB1P16-201ENST00000447155 GRAMD4Q6IC98 578 aa5.73□□□□□ -1.49
HMGB1P16-201ENST00000447155 SLC41A1Q8IVJ1 513 aa5.73□□□□□ -1.49
HMGB1P16-201ENST00000447155 WDR75Q8IWA0 830 aaKnown RBP5.73□□□□□ -1.49
HMGB1P16-201ENST00000447155 TCEAL8Q8IYN2 117 aa5.73□□□□□ -1.49
HMGB1P16-201ENST00000447155 TMEFF1Q8IYR6 380 aa5.73□□□□□ -1.49
HMGB1P16-201ENST00000447155 CDYL2Q8N8U2 506 aa5.73□□□□□ -1.49
HMGB1P16-201ENST00000447155 OR5AN1Q8NGI8 311 aa5.73□□□□□ -1.49
HMGB1P16-201ENST00000447155 RELTQ969Z4 430 aa5.73□□□□□ -1.49
HMGB1P16-201ENST00000447155 HSPBAP1Q96EW2 488 aa5.73□□□□□ -1.49
HMGB1P16-201ENST00000447155 CCDC136Q96JN2 1154 aa5.73□□□□□ -1.49
HMGB1P16-201ENST00000447155 HIST1H2AHQ96KK5 128 aa5.73□□□□□ -1.49
HMGB1P16-201ENST00000447155 C8orf48Q96LL4 319 aa5.73□□□□□ -1.49
HMGB1P16-201ENST00000447155 NUP88Q99567 741 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P16-201ENST00000447155 HIST1H2AJQ99878 128 aa5.73□□□□□ -1.49
HMGB1P16-201ENST00000447155 NOL10Q9BSC4 688 aaKnown RBP5.73□□□□□ -1.49
HMGB1P16-201ENST00000447155 GEMIN8Q9NWZ8 242 aaKnown RBP5.73□□□□□ -1.49
HMGB1P16-201ENST00000447155 FBXO10Q9UK96 956 aa5.73□□□□□ -1.49
HMGB1P16-201ENST00000447155 PNMA8BQ9ULN7 279 aaPredicted RBP5.73□□□□□ -1.49
HMGB1P16-201ENST00000447155 PMF1-BGLAPU3KQ54 211 aa5.73□□□□□ -1.49
HMGB1P16-201ENST00000447155 H0Y858 1186 aa5.72□□□□□ -1.49
HMGB1P16-201ENST00000447155 ETV2O00321 342 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P16-201ENST00000447155 NRP2O60462 931 aa5.72□□□□□ -1.49
HMGB1P16-201ENST00000447155 KNG1P01042 644 aa5.72□□□□□ -1.49
HMGB1P16-201ENST00000447155 PLA2G1BP04054 148 aaKnown RBP5.72□□□□□ -1.49
HMGB1P16-201ENST00000447155 PF4V1P10720 104 aa5.72□□□□□ -1.49
HMGB1P16-201ENST00000447155 PPARAQ07869 468 aa5.72□□□□□ -1.49
HMGB1P16-201ENST00000447155 SMAD4Q13485 552 aaKnown RBP5.72□□□□□ -1.49
HMGB1P16-201ENST00000447155 DGKDQ16760 1214 aa5.72□□□□□ -1.49
HMGB1P16-201ENST00000447155 ANO4Q32M45 955 aa5.72□□□□□ -1.49
HMGB1P16-201ENST00000447155 MBNL2Q5VZF2 373 aaKnown RBP5.72□□□□□ -1.49
HMGB1P16-201ENST00000447155 CXorf57Q6NSI4 855 aaKnown RBP5.72□□□□□ -1.49
HMGB1P16-201ENST00000447155 SYDE1Q6ZW31 735 aaPredicted RBP5.72□□□□□ -1.49
HMGB1P16-201ENST00000447155 MYO1HQ8N1T3 1032 aa5.72□□□□□ -1.49
HMGB1P16-201ENST00000447155 GAB3Q8WWW8 586 aa5.72□□□□□ -1.49
HMGB1P16-201ENST00000447155 HAPLN2Q9GZV7 340 aa5.72□□□□□ -1.49
HMGB1P16-201ENST00000447155 IFT122Q9HBG6 1241 aa5.72□□□□□ -1.49
HMGB1P16-201ENST00000447155 SYNPO2Q9UMS6 1093 aa5.72□□□□□ -1.49
HMGB1P16-201ENST00000447155 USP18Q9UMW8 372 aa5.72□□□□□ -1.49
HMGB1P16-201ENST00000447155 CDY2AQ9Y6F7 541 aa5.72□□□□□ -1.49
HMGB1P16-201ENST00000447155 IL33O95760 270 aa5.71□□□□□ -1.5
HMGB1P16-201ENST00000447155 CELA3BP08861 270 aa5.71□□□□□ -1.5
HMGB1P16-201ENST00000447155 MED14OSP0DP75 135 aa5.71□□□□□ -1.5
HMGB1P16-201ENST00000447155 COL6A1P12109 1028 aa5.71□□□□□ -1.5
HMGB1P16-201ENST00000447155 C5AR1P21730 350 aa5.71□□□□□ -1.5
HMGB1P16-201ENST00000447155 XPAP23025 273 aaPredicted RBP5.71□□□□□ -1.5
HMGB1P16-201ENST00000447155 CYP2C19P33261 490 aa5.71□□□□□ -1.5
HMGB1P16-201ENST00000447155 MESP2Q0VG99 397 aa5.71□□□□□ -1.5
HMGB1P16-201ENST00000447155 PRR31Q5SQ13 230 aa5.71□□□□□ -1.5
HMGB1P16-201ENST00000447155 TMEM200BQ69YZ2 307 aa5.71□□□□□ -1.5
HMGB1P16-201ENST00000447155 MCTP1Q6DN14 999 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms