RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 CEP63Q96MT8 703 aa15.28■□□□□ 0.04
SMARCA4-204ENST00000444061 POLR3CQ9BUI4 534 aaPredicted RBP15.28■□□□□ 0.04
SMARCA4-204ENST00000444061 CCDC113Q9H0I3 377 aa15.28■□□□□ 0.04
SMARCA4-204ENST00000444061 BZW2Q9Y6E2 419 aaKnown RBP15.28■□□□□ 0.04
SMARCA4-204ENST00000444061 SPDYE16A6NNV3 312 aaPredicted RBP15.28■□□□□ 0.04
SMARCA4-204ENST00000444061 ZBTB24O43167 697 aaPredicted RBP15.28■□□□□ 0.04
SMARCA4-204ENST00000444061 H2AFZP0C0S5 128 aa15.28■□□□□ 0.04
SMARCA4-204ENST00000444061 MUM1L1Q5H9M0 696 aa15.28■□□□□ 0.04
SMARCA4-204ENST00000444061 H2AFVQ71UI9 128 aa15.28■□□□□ 0.04
SMARCA4-204ENST00000444061 NSMCE1Q8WV22 266 aa15.28■□□□□ 0.04
SMARCA4-204ENST00000444061 PGBD4Q96DM1 585 aa15.28■□□□□ 0.04
SMARCA4-204ENST00000444061 A0A1W2PRG0 241 aa15.28■□□□□ 0.04
SMARCA4-204ENST00000444061 PRCPP42785 496 aa15.28■□□□□ 0.04
SMARCA4-204ENST00000444061 PKN1Q16512 942 aa15.28■□□□□ 0.04
SMARCA4-204ENST00000444061 SPRYD7Q5W111 196 aa15.28■□□□□ 0.04
SMARCA4-204ENST00000444061 SAAL1Q96ER3 474 aa15.28■□□□□ 0.04
SMARCA4-204ENST00000444061 CCDC114Q96M63 670 aa15.28■□□□□ 0.04
SMARCA4-204ENST00000444061 SLC15A5A6NIM6 579 aa15.28■□□□□ 0.04
SMARCA4-204ENST00000444061 MED7O43513 233 aa15.28■□□□□ 0.04
SMARCA4-204ENST00000444061 ADCY3O60266 1144 aa15.28■□□□□ 0.04
SMARCA4-204ENST00000444061 TOMM70O94826 608 aa15.28■□□□□ 0.04
SMARCA4-204ENST00000444061 ATN1P54259 1190 aaPredicted RBP15.28■□□□□ 0.04
SMARCA4-204ENST00000444061 BBXQ8WY36 941 aaPredicted RBP15.28■□□□□ 0.04
SMARCA4-204ENST00000444061 ACAP3Q96P50 834 aa15.28■□□□□ 0.04
SMARCA4-204ENST00000444061 GAS2O43903 313 aaKnown RBP15.27■□□□□ 0.04
SMARCA4-204ENST00000444061 ANXA13P27216 316 aa15.27■□□□□ 0.04
SMARCA4-204ENST00000444061 MRFAP1L1Q96HT8 127 aa15.27■□□□□ 0.04
SMARCA4-204ENST00000444061 REEP2Q9BRK0 252 aa15.27■□□□□ 0.04
SMARCA4-204ENST00000444061 PRR29P0C7W0 189 aa15.27■□□□□ 0.04
SMARCA4-204ENST00000444061 PLS3P13797 630 aa15.27■□□□□ 0.04
SMARCA4-204ENST00000444061 CIITAP33076 1130 aa15.27■□□□□ 0.04
SMARCA4-204ENST00000444061 SLC26A2P50443 739 aa15.27■□□□□ 0.04
SMARCA4-204ENST00000444061 GABPAQ06546 454 aa15.27■□□□□ 0.04
SMARCA4-204ENST00000444061 ZNF484Q5JVG2 852 aa15.27■□□□□ 0.04
SMARCA4-204ENST00000444061 OTUD6BQ8N6M0 293 aa15.27■□□□□ 0.04
SMARCA4-204ENST00000444061 RBAKQ9NYW8 714 aaPredicted RBP15.27■□□□□ 0.04
SMARCA4-204ENST00000444061 IKBKGQ9Y6K9 419 aa15.27■□□□□ 0.04
SMARCA4-204ENST00000444061 GCLMP48507 274 aa15.27■□□□□ 0.03
SMARCA4-204ENST00000444061 CATSPER3Q86XQ3 398 aa15.27■□□□□ 0.03
SMARCA4-204ENST00000444061 GPD1LQ8N335 351 aa15.27■□□□□ 0.03
SMARCA4-204ENST00000444061 HEXIM2Q96MH2 286 aaKnown RBP15.27■□□□□ 0.03
SMARCA4-204ENST00000444061 XPNPEP3Q9NQH7 507 aa15.27■□□□□ 0.03
SMARCA4-204ENST00000444061 NPHP3-ACAD11A0A0J9YXS1 232 aa15.27■□□□□ 0.03
SMARCA4-204ENST00000444061 PABPN1LA6NDY0 278 aaKnown RBP15.27■□□□□ 0.03
SMARCA4-204ENST00000444061 RNF8O76064 485 aa15.27■□□□□ 0.03
SMARCA4-204ENST00000444061 NLRP11P59045 1033 aaKnown RBP15.27■□□□□ 0.03
SMARCA4-204ENST00000444061 MAP2K1Q02750 393 aaPredicted RBP15.27■□□□□ 0.03
SMARCA4-204ENST00000444061 ACVR2BQ13705 512 aa15.27■□□□□ 0.03
SMARCA4-204ENST00000444061 PPP1R7Q15435 360 aa15.27■□□□□ 0.03
SMARCA4-204ENST00000444061 HADHQ16836 314 aaKnown RBP15.27■□□□□ 0.03
SMARCA4-204ENST00000444061 ZNF699Q32M78 642 aa15.27■□□□□ 0.03
SMARCA4-204ENST00000444061 PEX26Q7Z412 305 aa15.27■□□□□ 0.03
SMARCA4-204ENST00000444061 CEP57Q86XR8 500 aa15.27■□□□□ 0.03
SMARCA4-204ENST00000444061 CYP2C19P33261 490 aa15.26■□□□□ 0.03
SMARCA4-204ENST00000444061 THPOP40225 353 aa15.26■□□□□ 0.03
SMARCA4-204ENST00000444061 ANKRD23Q86SG2 305 aa15.26■□□□□ 0.03
SMARCA4-204ENST00000444061 SLC51AQ86UW1 340 aa15.26■□□□□ 0.03
SMARCA4-204ENST00000444061 KIF12Q96FN5 646 aa15.26■□□□□ 0.03
SMARCA4-204ENST00000444061 PRMT7Q9NVM4 692 aaPredicted RBP15.26■□□□□ 0.03
SMARCA4-204ENST00000444061 KIAA0391O15091 583 aaKnown RBP15.26■□□□□ 0.03
SMARCA4-204ENST00000444061 EVX2Q03828 476 aa15.26■□□□□ 0.03
SMARCA4-204ENST00000444061 CEP112Q8N8E3 955 aa15.26■□□□□ 0.03
SMARCA4-204ENST00000444061 TUBE1Q9UJT0 475 aa15.26■□□□□ 0.03
SMARCA4-204ENST00000444061 TRIM49BA6NDI0 452 aa15.26■□□□□ 0.03
SMARCA4-204ENST00000444061 CYTH3O43739 400 aa15.26■□□□□ 0.03
SMARCA4-204ENST00000444061 SYT10Q6XYQ8 523 aa15.26■□□□□ 0.03
SMARCA4-204ENST00000444061 TINF2Q9BSI4 451 aa15.26■□□□□ 0.03
SMARCA4-204ENST00000444061 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.26■□□□□ 0.03
SMARCA4-204ENST00000444061 PLCH1Q4KWH8 1693 aa15.26■□□□□ 0.03
SMARCA4-204ENST00000444061 BTBD19C9JJ37 291 aa15.26■□□□□ 0.03
SMARCA4-204ENST00000444061 H3BRB1 525 aa15.26■□□□□ 0.03
SMARCA4-204ENST00000444061 STK10O94804 968 aaKnown RBP15.26■□□□□ 0.03
SMARCA4-204ENST00000444061 UPP2O95045 317 aa15.26■□□□□ 0.03
SMARCA4-204ENST00000444061 YBX3P16989 372 aaKnown RBP eCLIP15.26■□□□□ 0.035e-7■□□□□ 11.3
SMARCA4-204ENST00000444061 KCNB1Q14721 858 aa15.26■□□□□ 0.03
SMARCA4-204ENST00000444061 TUT1Q9H6E5 874 aaKnown RBP15.26■□□□□ 0.03
SMARCA4-204ENST00000444061 AGO4Q9HCK5 861 aaKnown RBP15.26■□□□□ 0.03
SMARCA4-204ENST00000444061 CYP26B1Q9NR63 512 aa15.26■□□□□ 0.03
SMARCA4-204ENST00000444061 AFDNP55196 1824 aaKnown RBP15.26■□□□□ 0.03
SMARCA4-204ENST00000444061 ACTN1P12814 892 aa15.25■□□□□ 0.03
SMARCA4-204ENST00000444061 CYP11B2P19099 503 aa15.25■□□□□ 0.03
SMARCA4-204ENST00000444061 TSPY1Q01534 308 aa15.25■□□□□ 0.03
SMARCA4-204ENST00000444061 BFSP2Q13515 415 aa15.25■□□□□ 0.03
SMARCA4-204ENST00000444061 TREML2Q5T2D2 321 aa15.25■□□□□ 0.03
SMARCA4-204ENST00000444061 BAZ2BQ9UIF8 2168 aaKnown RBP15.25■□□□□ 0.03
SMARCA4-204ENST00000444061 SOCS7O14512 581 aa15.25■□□□□ 0.03
SMARCA4-204ENST00000444061 VAMP7P51809 220 aa15.25■□□□□ 0.03
SMARCA4-204ENST00000444061 MAP2K5Q13163 448 aa15.25■□□□□ 0.03
SMARCA4-204ENST00000444061 Q4G0T1 1027 aa15.25■□□□□ 0.03
SMARCA4-204ENST00000444061 USP49Q70CQ1 688 aa15.25■□□□□ 0.03
SMARCA4-204ENST00000444061 GPR142Q7Z601 462 aa15.25■□□□□ 0.03
SMARCA4-204ENST00000444061 TLK2Q86UE8 772 aa15.25■□□□□ 0.03
SMARCA4-204ENST00000444061 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.25■□□□□ 0.03
SMARCA4-204ENST00000444061 STRCP1A6NGW2 1772 aa15.25■□□□□ 0.03
SMARCA4-204ENST00000444061 LY6KQ17RY6 165 aa15.25■□□□□ 0.03
SMARCA4-204ENST00000444061 IQSEC1Q6DN90 963 aa15.25■□□□□ 0.03
SMARCA4-204ENST00000444061 C7orf43Q8WVR3 580 aa15.25■□□□□ 0.03
SMARCA4-204ENST00000444061 GCNAQ96QF7 691 aa15.25■□□□□ 0.03
SMARCA4-204ENST00000444061 FSD2A1L4K1 749 aa15.25■□□□□ 0.03
SMARCA4-204ENST00000444061 PAK2Q13177 524 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms