RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 SNAP25P60880 206 aa12.43□□□□□ -0.42
PTCH1-208ENST00000430669 SLC9A2Q9UBY0 812 aa12.43□□□□□ -0.42
PTCH1-208ENST00000430669 PSMD14O00487 310 aa12.43□□□□□ -0.42
PTCH1-208ENST00000430669 PFDN6O15212 129 aa12.43□□□□□ -0.42
PTCH1-208ENST00000430669 STAT3P40763 770 aa12.43□□□□□ -0.42
PTCH1-208ENST00000430669 C10orf67Q8IYJ2 551 aa12.43□□□□□ -0.42
PTCH1-208ENST00000430669 ECEL1O95672 775 aa12.43□□□□□ -0.42
PTCH1-208ENST00000430669 GUCY2FP51841 1108 aa12.43□□□□□ -0.42
PTCH1-208ENST00000430669 RASA3Q14644 834 aa12.43□□□□□ -0.42
PTCH1-208ENST00000430669 SLC15A2Q16348 729 aa12.43□□□□□ -0.42
PTCH1-208ENST00000430669 SYN2Q92777 582 aaPredicted RBP12.43□□□□□ -0.42
PTCH1-208ENST00000430669 POLLQ9UGP5 575 aa12.43□□□□□ -0.42
PTCH1-208ENST00000430669 MOCS3O95396 460 aa12.43□□□□□ -0.42
PTCH1-208ENST00000430669 FMO2Q99518 471 aa12.43□□□□□ -0.42
PTCH1-208ENST00000430669 AHDC1Q5TGY3 1603 aaPredicted RBP12.43□□□□□ -0.42
PTCH1-208ENST00000430669 TARSL2A2RTX5 802 aaKnown RBP12.43□□□□□ -0.42
PTCH1-208ENST00000430669 GPC5P78333 572 aa12.43□□□□□ -0.42
PTCH1-208ENST00000430669 SPP2Q13103 211 aa12.43□□□□□ -0.42
PTCH1-208ENST00000430669 JMJD4Q9H9V9 463 aa12.43□□□□□ -0.42
PTCH1-208ENST00000430669 DGAT1O75907 488 aa12.43□□□□□ -0.42
PTCH1-208ENST00000430669 TTC31Q49AM3 519 aaPredicted RBP12.43□□□□□ -0.42
PTCH1-208ENST00000430669 FAM163AQ96GL9 167 aaPredicted RBP12.43□□□□□ -0.42
PTCH1-208ENST00000430669 NLRP4Q96MN2 994 aa12.43□□□□□ -0.42
PTCH1-208ENST00000430669 TRIM49BA6NDI0 452 aa12.42□□□□□ -0.42
PTCH1-208ENST00000430669 SRGAP2CP0DJJ0 459 aa12.42□□□□□ -0.42
PTCH1-208ENST00000430669 RPA1P27694 616 aa12.42□□□□□ -0.42
PTCH1-208ENST00000430669 SEC23AQ15436 765 aa12.42□□□□□ -0.42
PTCH1-208ENST00000430669 ADSSL1Q8N142 457 aa12.42□□□□□ -0.42
PTCH1-208ENST00000430669 CCDC6Q16204 474 aa12.42□□□□□ -0.42
PTCH1-208ENST00000430669 CEP85LQ5SZL2 805 aa12.42□□□□□ -0.42
PTCH1-208ENST00000430669 ENGASEQ8NFI3 743 aa12.42□□□□□ -0.42
PTCH1-208ENST00000430669 MRIQ9BWK5 157 aa12.42□□□□□ -0.42
PTCH1-208ENST00000430669 SORBS3O60504 671 aa12.42□□□□□ -0.42
PTCH1-208ENST00000430669 SLC25A27O95847 323 aa12.42□□□□□ -0.42
PTCH1-208ENST00000430669 RASGRP2Q7LDG7 609 aa12.42□□□□□ -0.42
PTCH1-208ENST00000430669 CHST13Q8NET6 341 aa12.42□□□□□ -0.42
PTCH1-208ENST00000430669 RBM41Q96IZ5 413 aaKnown RBP12.42□□□□□ -0.42
PTCH1-208ENST00000430669 WNT8AQ9H1J5 351 aa12.42□□□□□ -0.42
PTCH1-208ENST00000430669 ICAM1P05362 532 aa12.42□□□□□ -0.42
PTCH1-208ENST00000430669 MICALL2Q8IY33 904 aa12.42□□□□□ -0.42
PTCH1-208ENST00000430669 PPP4R1Q8TF05 950 aa12.42□□□□□ -0.42
PTCH1-208ENST00000430669 LRRC53A6NM62 1247 aa12.42□□□□□ -0.42
PTCH1-208ENST00000430669 CIB2O75838 187 aa12.42□□□□□ -0.42
PTCH1-208ENST00000430669 GPD1LQ8N335 351 aa12.42□□□□□ -0.42
PTCH1-208ENST00000430669 CDKL2Q92772 493 aa12.42□□□□□ -0.42
PTCH1-208ENST00000430669 CAPS2Q9BXY5 557 aa12.42□□□□□ -0.42
PTCH1-208ENST00000430669 SGK1O00141 431 aa12.42□□□□□ -0.42
PTCH1-208ENST00000430669 DENND3A2RUS2 1198 aa12.42□□□□□ -0.42
PTCH1-208ENST00000430669 ZNF699Q32M78 642 aa12.42□□□□□ -0.42
PTCH1-208ENST00000430669 KCTD6Q8NC69 237 aa12.42□□□□□ -0.42
PTCH1-208ENST00000430669 RAB3IPQ96QF0 476 aaPredicted RBP12.42□□□□□ -0.42
PTCH1-208ENST00000430669 ZNF148Q9UQR1 794 aa12.42□□□□□ -0.42
PTCH1-208ENST00000430669 LPXNO60711 386 aa12.41□□□□□ -0.42
PTCH1-208ENST00000430669 RFC5P40937 340 aa12.41□□□□□ -0.42
PTCH1-208ENST00000430669 MNAT1P51948 309 aa12.41□□□□□ -0.42
PTCH1-208ENST00000430669 FKBP1CQ5VVH2 108 aa12.41□□□□□ -0.42
PTCH1-208ENST00000430669 POLR3FQ9H1D9 316 aaPredicted RBP12.41□□□□□ -0.42
PTCH1-208ENST00000430669 GABBR1Q9UBS5 961 aa12.41□□□□□ -0.42
PTCH1-208ENST00000430669 ZBTB7AO95365 584 aa12.41□□□□□ -0.42
PTCH1-208ENST00000430669 HOXA10P31260 410 aaPredicted RBP12.41□□□□□ -0.42
PTCH1-208ENST00000430669 Q4G0T1 1027 aa12.41□□□□□ -0.42
PTCH1-208ENST00000430669 TRIM62Q9BVG3 475 aa12.41□□□□□ -0.42
PTCH1-208ENST00000430669 DNAJC12Q9UKB3 198 aa12.41□□□□□ -0.42
PTCH1-208ENST00000430669 AKAP11Q9UKA4 1901 aa12.41□□□□□ -0.42
PTCH1-208ENST00000430669 ENC1O14682 589 aa12.41□□□□□ -0.42
PTCH1-208ENST00000430669 GIPC1O14908 333 aa12.41□□□□□ -0.42
PTCH1-208ENST00000430669 ZNF746Q6NUN9 644 aaPredicted RBP12.41□□□□□ -0.42
PTCH1-208ENST00000430669 CCDC13Q8IYE1 715 aa12.41□□□□□ -0.42
PTCH1-208ENST00000430669 STK33Q9BYT3 514 aa12.41□□□□□ -0.42
PTCH1-208ENST00000430669 CPVLQ9H3G5 476 aa12.41□□□□□ -0.42
PTCH1-208ENST00000430669 IGSF9BQ9UPX0 1349 aa12.41□□□□□ -0.42
PTCH1-208ENST00000430669 E9PMD0 336 aa12.41□□□□□ -0.42
PTCH1-208ENST00000430669 RNF40O75150 1001 aa12.41□□□□□ -0.42
PTCH1-208ENST00000430669 SOX5P35711 763 aa12.41□□□□□ -0.42
PTCH1-208ENST00000430669 GPC3P51654 580 aa12.41□□□□□ -0.42
PTCH1-208ENST00000430669 RWDD2BP57060 319 aa12.41□□□□□ -0.42
PTCH1-208ENST00000430669 DR1Q01658 176 aa12.41□□□□□ -0.42
PTCH1-208ENST00000430669 MKNK1Q9BUB5 465 aa12.41□□□□□ -0.42
PTCH1-208ENST00000430669 VPS37BQ9H9H4 285 aa12.41□□□□□ -0.42
PTCH1-208ENST00000430669 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.41□□□□□ -0.42
PTCH1-208ENST00000430669 A0A0G2JLW4 131 aa12.41□□□□□ -0.42
PTCH1-208ENST00000430669 SSU72P8A0A1W2PR75 194 aa12.41□□□□□ -0.42
PTCH1-208ENST00000430669 P4HA2O15460 535 aa12.41□□□□□ -0.42
PTCH1-208ENST00000430669 PLS3P13797 630 aa12.41□□□□□ -0.42
PTCH1-208ENST00000430669 CNGA1P29973 690 aa12.41□□□□□ -0.42
PTCH1-208ENST00000430669 GARSP41250 739 aaKnown RBP12.41□□□□□ -0.42
PTCH1-208ENST00000430669 SNAPC2Q13487 334 aa12.41□□□□□ -0.42
PTCH1-208ENST00000430669 ANKRD40Q6AI12 368 aa12.41□□□□□ -0.42
PTCH1-208ENST00000430669 ABI1Q8IZP0 508 aa12.41□□□□□ -0.42
PTCH1-208ENST00000430669 SLC12A6Q9UHW9 1150 aa12.41□□□□□ -0.42
PTCH1-208ENST00000430669 GOLGA8QA0A0J9YX86 632 aa12.4□□□□□ -0.42
PTCH1-208ENST00000430669 GOLGA8OA6NCC3 632 aa12.4□□□□□ -0.42
PTCH1-208ENST00000430669 GOLGA8NF8WBI6 632 aa12.4□□□□□ -0.42
PTCH1-208ENST00000430669 HIP1RO75146 1068 aa12.4□□□□□ -0.42
PTCH1-208ENST00000430669 ANKEF1Q9NU02 776 aa12.4□□□□□ -0.42
PTCH1-208ENST00000430669 MICALL1Q8N3F8 863 aa12.4□□□□□ -0.42
PTCH1-208ENST00000430669 RAB3IL1Q8TBN0 382 aa12.4□□□□□ -0.42
PTCH1-208ENST00000430669 CFAP57Q96MR6 1250 aa12.4□□□□□ -0.42
PTCH1-208ENST00000430669 SPATA33Q96N06 139 aa12.4□□□□□ -0.42
PTCH1-208ENST00000430669 A0A1B0GUL6 1792 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms