RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 MOXD1Q6UVY6 613 aa19.26■□□□□ 0.67
CPSF4-203ENST00000430038 ANO5Q75V66 913 aa19.26■□□□□ 0.67
CPSF4-203ENST00000430038 GJD3Q8N144 294 aa19.26■□□□□ 0.67
CPSF4-203ENST00000430038 HAS1Q92839 578 aa19.26■□□□□ 0.67
CPSF4-203ENST00000430038 CASD1Q96PB1 797 aa19.26■□□□□ 0.67
CPSF4-203ENST00000430038 SLKQ9H2G2 1235 aaPredicted RBP19.26■□□□□ 0.67
CPSF4-203ENST00000430038 KCNMB3Q9NPA1 279 aa19.26■□□□□ 0.67
CPSF4-203ENST00000430038 C1orf112Q9NSG2 853 aa19.26■□□□□ 0.67
CPSF4-203ENST00000430038 DDX25Q9UHL0 483 aaKnown RBP19.26■□□□□ 0.67
CPSF4-203ENST00000430038 TCEAL9Q9UHQ7 104 aa19.26■□□□□ 0.67
CPSF4-203ENST00000430038 VAV3Q9UKW4 847 aa19.26■□□□□ 0.67
CPSF4-203ENST00000430038 FAM86C2PA6NEL3 165 aa19.25■□□□□ 0.67
CPSF4-203ENST00000430038 PI4K2BG5E9Z4 385 aa19.25■□□□□ 0.67
CPSF4-203ENST00000430038 DARSP14868 501 aaKnown RBP19.25■□□□□ 0.67
CPSF4-203ENST00000430038 ERVFC1P60507 584 aa19.25■□□□□ 0.67
CPSF4-203ENST00000430038 ME3Q16798 604 aa19.25■□□□□ 0.67
CPSF4-203ENST00000430038 NAALADL2Q58DX5 795 aa19.25■□□□□ 0.67
CPSF4-203ENST00000430038 LRFN3Q9BTN0 628 aa19.25■□□□□ 0.67
CPSF4-203ENST00000430038 TMEM161AQ9NX61 479 aa19.25■□□□□ 0.67
CPSF4-203ENST00000430038 CLEC1BQ9P126 229 aa19.25■□□□□ 0.67
CPSF4-203ENST00000430038 GLP2RO95838 553 aa19.24■□□□□ 0.67
CPSF4-203ENST00000430038 ATF7P17544 494 aaPredicted RBP19.24■□□□□ 0.67
CPSF4-203ENST00000430038 TBC1D8BQ0IIM8 1120 aa19.24■□□□□ 0.67
CPSF4-203ENST00000430038 XKR3Q5GH77 459 aa19.24■□□□□ 0.67
CPSF4-203ENST00000430038 PLA2G4FQ68DD2 849 aa19.24■□□□□ 0.67
CPSF4-203ENST00000430038 GALNT17Q6IS24 598 aa19.24■□□□□ 0.67
CPSF4-203ENST00000430038 KRT25Q7Z3Z0 450 aa19.24■□□□□ 0.67
CPSF4-203ENST00000430038 RBM23Q86U06 439 aaKnown RBP19.24■□□□□ 0.67
CPSF4-203ENST00000430038 KSR1Q8IVT5 923 aa19.24■□□□□ 0.67
CPSF4-203ENST00000430038 COLGALT1Q8NBJ5 622 aa19.24■□□□□ 0.67
CPSF4-203ENST00000430038 RDM1Q8NG50 284 aa19.24■□□□□ 0.67
CPSF4-203ENST00000430038 C22orf23Q9BZE7 217 aa19.24■□□□□ 0.67
CPSF4-203ENST00000430038 SEPT9Q9UHD8 586 aaPredicted RBP19.24■□□□□ 0.67
CPSF4-203ENST00000430038 STK36Q9NRP7 1315 aa19.24■□□□□ 0.67
CPSF4-203ENST00000430038 DDX11L8A8MPP1 907 aa19.23■□□□□ 0.67
CPSF4-203ENST00000430038 WNT7AO00755 349 aa19.23■□□□□ 0.67
CPSF4-203ENST00000430038 ZBTB39O15060 712 aa19.23■□□□□ 0.67
CPSF4-203ENST00000430038 PBX3P40426 434 aa19.23■□□□□ 0.67
CPSF4-203ENST00000430038 NPEPPSP55786 919 aa19.23■□□□□ 0.67
CPSF4-203ENST00000430038 ST3GAL1Q11201 340 aa19.23■□□□□ 0.67
CPSF4-203ENST00000430038 NR5A1Q13285 461 aa19.23■□□□□ 0.67
CPSF4-203ENST00000430038 CLLU1OSQ5K130 101 aa19.23■□□□□ 0.67
CPSF4-203ENST00000430038 CPLX2Q6PUV4 134 aaKnown RBP19.23■□□□□ 0.67
CPSF4-203ENST00000430038 PIK3AP1Q6ZUJ8 805 aa19.23■□□□□ 0.67
CPSF4-203ENST00000430038 ECHDC2Q86YB7 292 aa19.23■□□□□ 0.67
CPSF4-203ENST00000430038 VN1R2Q8NFZ6 395 aa19.23■□□□□ 0.67
CPSF4-203ENST00000430038 TNFRSF25Q93038 417 aa19.23■□□□□ 0.67
CPSF4-203ENST00000430038 MSLNLQ96KJ4 702 aa19.23■□□□□ 0.67
CPSF4-203ENST00000430038 MAP7D2Q96T17 732 aa19.23■□□□□ 0.67
CPSF4-203ENST00000430038 ELAC1Q9H777 363 aaKnown RBP19.23■□□□□ 0.67
CPSF4-203ENST00000430038 ATP6V0A4Q9HBG4 840 aa19.23■□□□□ 0.67
CPSF4-203ENST00000430038 A0A087WZ62 844 aa19.22■□□□□ 0.67
CPSF4-203ENST00000430038 C19orf67A6NJJ6 358 aa19.22■□□□□ 0.67
CPSF4-203ENST00000430038 PER2O15055 1255 aa19.22■□□□□ 0.67
CPSF4-203ENST00000430038 MBTPS2O43462 519 aa19.22■□□□□ 0.67
CPSF4-203ENST00000430038 FGF18O76093 207 aa19.22■□□□□ 0.67
CPSF4-203ENST00000430038 NEFLP07196 543 aa19.22■□□□□ 0.67
CPSF4-203ENST00000430038 TMOD1P28289 359 aa19.22■□□□□ 0.67
CPSF4-203ENST00000430038 NRIP1P48552 1158 aa19.22■□□□□ 0.67
CPSF4-203ENST00000430038 ZP2Q05996 745 aa19.22■□□□□ 0.67
CPSF4-203ENST00000430038 PPP2R5CQ13362 524 aa19.22■□□□□ 0.67
CPSF4-203ENST00000430038 ODR4Q5SWX8 454 aa19.22■□□□□ 0.67
CPSF4-203ENST00000430038 PPP4R3AQ6IN85 833 aa19.22■□□□□ 0.67
CPSF4-203ENST00000430038 ZNF598Q86UK7 904 aaKnown RBP19.22■□□□□ 0.67
CPSF4-203ENST00000430038 FAM177A1Q8N128 213 aaPredicted RBP19.22■□□□□ 0.67
CPSF4-203ENST00000430038 FDXACB1Q9BRP7 624 aaPredicted RBP19.22■□□□□ 0.67
CPSF4-203ENST00000430038 C1QTNF1Q9BXJ1 281 aa19.22■□□□□ 0.67
CPSF4-203ENST00000430038 ORC3Q9UBD5 711 aaPredicted RBP19.22■□□□□ 0.67
CPSF4-203ENST00000430038 ARID2Q68CP9 1835 aa19.22■□□□□ 0.67
CPSF4-203ENST00000430038 MAFO75444 373 aaPredicted RBP19.21■□□□□ 0.67
CPSF4-203ENST00000430038 ANAPC15P60006 121 aa19.21■□□□□ 0.67
CPSF4-203ENST00000430038 SPIRE1Q08AE8 756 aa19.21■□□□□ 0.67
CPSF4-203ENST00000430038 SPOUT1Q5T280 376 aaKnown RBP19.21■□□□□ 0.67
CPSF4-203ENST00000430038 NEK8Q86SG6 692 aa19.21■□□□□ 0.67
CPSF4-203ENST00000430038 POTEDQ86YR6 584 aa19.21■□□□□ 0.67
CPSF4-203ENST00000430038 NLRP7Q8WX94 980 aa19.21■□□□□ 0.67
CPSF4-203ENST00000430038 RGL1Q9NZL6 768 aa19.21■□□□□ 0.67
CPSF4-203ENST00000430038 CCDC194A0A1B0GVG4 234 aa19.2■□□□□ 0.66
CPSF4-203ENST00000430038 MEIS3P2A8K0S8 358 aa19.2■□□□□ 0.66
CPSF4-203ENST00000430038 FSCN2O14926 492 aa19.2■□□□□ 0.66
CPSF4-203ENST00000430038 NCK2O43639 380 aa19.2■□□□□ 0.66
CPSF4-203ENST00000430038 CCNT1O60563 726 aaKnown RBP19.2■□□□□ 0.66
CPSF4-203ENST00000430038 JAK2O60674 1132 aa19.2■□□□□ 0.66
CPSF4-203ENST00000430038 SSTR3P32745 418 aaPredicted RBP19.2■□□□□ 0.66
CPSF4-203ENST00000430038 PSMC5P62195 406 aa19.2■□□□□ 0.66
CPSF4-203ENST00000430038 SMAD2Q15796 467 aaKnown RBP19.2■□□□□ 0.66
CPSF4-203ENST00000430038 PUS10Q3MIT2 529 aaKnown RBP19.2■□□□□ 0.66
CPSF4-203ENST00000430038 EFHBQ8N7U6 833 aa19.2■□□□□ 0.66
CPSF4-203ENST00000430038 NSUN7Q8NE18 718 aaKnown RBP19.2■□□□□ 0.66
CPSF4-203ENST00000430038 TMEM117Q9H0C3 514 aa19.2■□□□□ 0.66
CPSF4-203ENST00000430038 SUCLA2Q9P2R7 463 aaPredicted RBP19.2■□□□□ 0.66
CPSF4-203ENST00000430038 PCDHB12Q9Y5F1 795 aa19.2■□□□□ 0.66
CPSF4-203ENST00000430038 A0A0U1RQF3 1178 aa19.19■□□□□ 0.66
CPSF4-203ENST00000430038 GPR37L1O60883 481 aa19.19■□□□□ 0.66
CPSF4-203ENST00000430038 CDKL5O76039 1030 aa19.19■□□□□ 0.66
CPSF4-203ENST00000430038 ZSCAN20P17040 1043 aaPredicted RBP19.19■□□□□ 0.66
CPSF4-203ENST00000430038 LONRF3Q496Y0 759 aa19.19■□□□□ 0.66
CPSF4-203ENST00000430038 FAM43BQ6ZT52 329 aaPredicted RBP19.19■□□□□ 0.66
CPSF4-203ENST00000430038 RHPN2Q8IUC4 686 aa19.19■□□□□ 0.66
CPSF4-203ENST00000430038 RNF169Q8NCN4 708 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms