RNA–Protein interactions for RNA: ENST00000420363.5

CPNE1-211, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-211ENST00000420363 RPS6KA5O75582 802 aa23.89■■□□□ 1.41
CPNE1-211ENST00000420363 COL9A1P20849 921 aa23.89■■□□□ 1.41
CPNE1-211ENST00000420363 DNM2P50570 870 aa23.89■■□□□ 1.41
CPNE1-211ENST00000420363 FXR2P51116 673 aaKnown RBP eCLIP23.89■■□□□ 1.412e-6■■■□□ 18.4
CPNE1-211ENST00000420363 GPC3P51654 580 aa23.89■■□□□ 1.41
CPNE1-211ENST00000420363 HTRA4P83105 476 aaPredicted RBP23.89■■□□□ 1.41
CPNE1-211ENST00000420363 CTTNQ14247 550 aaKnown RBP23.89■■□□□ 1.41
CPNE1-211ENST00000420363 NBR1Q14596 966 aa23.89■■□□□ 1.41
CPNE1-211ENST00000420363 FAM117BQ6P1L5 589 aa23.89■■□□□ 1.41
CPNE1-211ENST00000420363 HLA-CQ95604 372 aa23.89■■□□□ 1.41
CPNE1-211ENST00000420363 CEP170P1Q96L14 293 aa23.89■■□□□ 1.41
CPNE1-211ENST00000420363 OSMRQ99650 979 aa23.89■■□□□ 1.41
CPNE1-211ENST00000420363 ADAMTS10Q9H324 1103 aa23.89■■□□□ 1.41
CPNE1-211ENST00000420363 SUGCTQ9HAC7 445 aa23.89■■□□□ 1.41
CPNE1-211ENST00000420363 ERVK-5Q9HDB9 667 aa23.89■■□□□ 1.41
CPNE1-211ENST00000420363 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.89■■□□□ 1.41
CPNE1-211ENST00000420363 LMCD1Q9NZU5 365 aa23.89■■□□□ 1.41
CPNE1-211ENST00000420363 MTUS1Q9ULD2 1270 aa23.89■■□□□ 1.41
CPNE1-211ENST00000420363 GINS2Q9Y248 185 aa23.89■■□□□ 1.41
CPNE1-211ENST00000420363 LPXNO60711 386 aa23.88■■□□□ 1.41
CPNE1-211ENST00000420363 PRPHP41219 470 aa23.88■■□□□ 1.41
CPNE1-211ENST00000420363 NLRP11P59045 1033 aaKnown RBP23.88■■□□□ 1.41
CPNE1-211ENST00000420363 TPH2Q8IWU9 490 aa23.88■■□□□ 1.41
CPNE1-211ENST00000420363 ERMNQ8TAM6 284 aa23.88■■□□□ 1.41
CPNE1-211ENST00000420363 LINC01599Q8WXQ3 324 aa23.88■■□□□ 1.41
CPNE1-211ENST00000420363 TGS1Q96RS0 853 aaKnown RBP23.88■■□□□ 1.41
CPNE1-211ENST00000420363 POLR3CQ9BUI4 534 aaPredicted RBP23.88■■□□□ 1.41
CPNE1-211ENST00000420363 CDHR5Q9HBB8 845 aa23.88■■□□□ 1.41
CPNE1-211ENST00000420363 TUFT1Q9NNX1 390 aa23.88■■□□□ 1.41
CPNE1-211ENST00000420363 ANKEF1Q9NU02 776 aa23.88■■□□□ 1.41
CPNE1-211ENST00000420363 NOC2LQ9Y3T9 749 aaKnown RBP23.88■■□□□ 1.41
CPNE1-211ENST00000420363 INSL6Q9Y581 213 aa23.88■■□□□ 1.41
CPNE1-211ENST00000420363 PCDHB6Q9Y5E3 794 aa23.88■■□□□ 1.41
CPNE1-211ENST00000420363 GPR182O15218 404 aa23.87■■□□□ 1.41
CPNE1-211ENST00000420363 MUTP22033 750 aa23.87■■□□□ 1.41
CPNE1-211ENST00000420363 TECP42680 631 aa23.87■■□□□ 1.41
CPNE1-211ENST00000420363 POLGP54098 1239 aaPredicted RBP23.87■■□□□ 1.41
CPNE1-211ENST00000420363 NPEPPSP55786 919 aa23.87■■□□□ 1.41
CPNE1-211ENST00000420363 HAUS3Q68CZ6 603 aa23.87■■□□□ 1.41
CPNE1-211ENST00000420363 BRAPQ7Z569 592 aa23.87■■□□□ 1.41
CPNE1-211ENST00000420363 ZNF410Q86VK4 478 aa23.87■■□□□ 1.41
CPNE1-211ENST00000420363 FAM228AQ86W67 206 aa23.87■■□□□ 1.41
CPNE1-211ENST00000420363 SP7Q8TDD2 431 aaPredicted RBP23.87■■□□□ 1.41
CPNE1-211ENST00000420363 GDPD5Q8WTR4 605 aa23.87■■□□□ 1.41
CPNE1-211ENST00000420363 SH2D3AQ9BRG2 576 aa23.87■■□□□ 1.41
CPNE1-211ENST00000420363 TCF20Q9UGU0 1960 aaKnown RBP23.87■■□□□ 1.41
CPNE1-211ENST00000420363 ENPP3O14638 875 aa23.86■■□□□ 1.41
CPNE1-211ENST00000420363 XRCC6P12956 609 aaKnown RBP eCLIP23.86■■□□□ 1.41
CPNE1-211ENST00000420363 EIF4BP23588 611 aaKnown RBP23.86■■□□□ 1.41
CPNE1-211ENST00000420363 ERVK-21P61565 698 aa23.86■■□□□ 1.41
CPNE1-211ENST00000420363 PTGDRQ13258 359 aa23.86■■□□□ 1.41
CPNE1-211ENST00000420363 DRP2Q13474 957 aa23.86■■□□□ 1.41
CPNE1-211ENST00000420363 PPP1R16BQ96T49 567 aa23.86■■□□□ 1.41
CPNE1-211ENST00000420363 RAB34Q9BZG1 259 aa23.86■■□□□ 1.41
CPNE1-211ENST00000420363 TMX1Q9H3N1 280 aa23.86■■□□□ 1.41
CPNE1-211ENST00000420363 STK24Q9Y6E0 443 aa23.86■■□□□ 1.41
CPNE1-211ENST00000420363 LINC01553A4QN01 128 aa23.85■■□□□ 1.41
CPNE1-211ENST00000420363 RBAK-RBAKDNI3L0D1 243 aa23.85■■□□□ 1.41
CPNE1-211ENST00000420363 SPATA31C1P0DKV0 1188 aa23.85■■□□□ 1.41
CPNE1-211ENST00000420363 DARSP14868 501 aaKnown RBP23.85■■□□□ 1.41
CPNE1-211ENST00000420363 RPA1P27694 616 aa23.85■■□□□ 1.41
CPNE1-211ENST00000420363 EMC2Q15006 297 aa23.85■■□□□ 1.41
CPNE1-211ENST00000420363 XKR9Q5GH70 373 aa23.85■■□□□ 1.41
CPNE1-211ENST00000420363 IGSF22Q8N9C0 903 aa23.85■■□□□ 1.41
CPNE1-211ENST00000420363 ST3GAL5Q9UNP4 418 aa23.85■■□□□ 1.41
CPNE1-211ENST00000420363 COL4A4P53420 1690 aaPredicted RBP23.84■■□□□ 1.41
CPNE1-211ENST00000420363 ATP2C1P98194 919 aaPredicted RBP23.84■■□□□ 1.41
CPNE1-211ENST00000420363 NFX1Q12986 1120 aaKnown RBP23.84■■□□□ 1.41
CPNE1-211ENST00000420363 PDIA5Q14554 519 aa23.84■■□□□ 1.41
CPNE1-211ENST00000420363 CATSPER3Q86XQ3 398 aa23.84■■□□□ 1.41
CPNE1-211ENST00000420363 ZNF579Q8NAF0 562 aaKnown RBP23.84■■□□□ 1.41
CPNE1-211ENST00000420363 TCP11Q8WWU5 503 aa23.84■■□□□ 1.41
CPNE1-211ENST00000420363 SCLT1Q96NL6 688 aa23.84■■□□□ 1.41
CPNE1-211ENST00000420363 RC3H2Q9HBD1 1191 aaKnown RBP23.84■■□□□ 1.41
CPNE1-211ENST00000420363 C1orf112Q9NSG2 853 aa23.84■■□□□ 1.41
CPNE1-211ENST00000420363 RNF216Q9NWF9 866 aaPredicted RBP23.84■■□□□ 1.41
CPNE1-211ENST00000420363 SUCLA2Q9P2R7 463 aaPredicted RBP23.84■■□□□ 1.41
CPNE1-211ENST00000420363 RALGAPA2Q2PPJ7 1873 aa23.83■■□□□ 1.41
CPNE1-211ENST00000420363 MED24O75448 989 aa23.83■■□□□ 1.41
CPNE1-211ENST00000420363 DGAT1O75907 488 aa23.83■■□□□ 1.41
CPNE1-211ENST00000420363 RARRES1P49788 294 aa23.83■■□□□ 1.41
CPNE1-211ENST00000420363 NPAS4Q8IUM7 802 aa23.83■■□□□ 1.41
CPNE1-211ENST00000420363 CRIPAKQ8N1N5 446 aa23.83■■□□□ 1.41
CPNE1-211ENST00000420363 NLRP7Q8WX94 980 aa23.83■■□□□ 1.41
CPNE1-211ENST00000420363 PSPC1Q8WXF1 523 aaKnown RBP23.83■■□□□ 1.41
CPNE1-211ENST00000420363 CCDC43Q96MW1 224 aaKnown RBP23.83■■□□□ 1.41
CPNE1-211ENST00000420363 YME1L1Q96TA2 773 aa23.83■■□□□ 1.41
CPNE1-211ENST00000420363 MTRQ99707 1265 aa23.83■■□□□ 1.41
CPNE1-211ENST00000420363 GCOM2Q9BZD3 368 aaPredicted RBP23.83■■□□□ 1.41
CPNE1-211ENST00000420363 DBR1Q9UK59 544 aaKnown RBP23.83■■□□□ 1.41
CPNE1-211ENST00000420363 COL4A3BPQ9Y5P4 624 aa23.83■■□□□ 1.41
CPNE1-211ENST00000420363 ZBTB39O15060 712 aa23.82■■□□□ 1.4
CPNE1-211ENST00000420363 RTN4RL1Q86UN2 441 aaPredicted RBP23.82■■□□□ 1.4
CPNE1-211ENST00000420363 RHPN2Q8IUC4 686 aa23.82■■□□□ 1.4
CPNE1-211ENST00000420363 HSCBQ8IWL3 235 aa23.82■■□□□ 1.4
CPNE1-211ENST00000420363 NACC1Q96RE7 527 aa23.82■■□□□ 1.4
CPNE1-211ENST00000420363 INO80BQ9C086 356 aaPredicted RBP23.82■■□□□ 1.4
CPNE1-211ENST00000420363 ATP6V0A4Q9HBG4 840 aa23.82■■□□□ 1.4
CPNE1-211ENST00000420363 LRWD1Q9UFC0 647 aa23.82■■□□□ 1.4
CPNE1-211ENST00000420363 NLRC5Q86WI3 1866 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms