RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 U2AF1L4Q8WU68 220 aaKnown RBP17.3■□□□□ 0.36
HOXD3-202ENST00000410016 LMBR1Q8WVP7 490 aa17.3■□□□□ 0.36
HOXD3-202ENST00000410016 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.3■□□□□ 0.369e-16■■■■■ 136.4
HOXD3-202ENST00000410016 TAF1DQ9H5J8 278 aaPredicted RBP17.3■□□□□ 0.36
HOXD3-202ENST00000410016 GOPCQ9HD26 462 aa17.3■□□□□ 0.36
HOXD3-202ENST00000410016 ODF2LQ9ULJ1 636 aa17.3■□□□□ 0.36
HOXD3-202ENST00000410016 UBE4BO95155 1302 aa17.3■□□□□ 0.36
HOXD3-202ENST00000410016 SART1O43290 800 aaKnown RBP17.29■□□□□ 0.36
HOXD3-202ENST00000410016 PPP1R12BO60237 982 aaPredicted RBP17.29■□□□□ 0.36
HOXD3-202ENST00000410016 PPP1R37O75864 691 aa17.29■□□□□ 0.36
HOXD3-202ENST00000410016 DRAP1Q14919 205 aaPredicted RBP17.29■□□□□ 0.36
HOXD3-202ENST00000410016 PEX26Q7Z412 305 aa17.29■□□□□ 0.36
HOXD3-202ENST00000410016 HES6Q96HZ4 224 aa17.29■□□□□ 0.36
HOXD3-202ENST00000410016 ZNF577Q9BSK1 485 aa17.29■□□□□ 0.36
HOXD3-202ENST00000410016 DNAJC12Q9UKB3 198 aa17.29■□□□□ 0.36
HOXD3-202ENST00000410016 SPDYE2BA6NHP3 402 aa17.29■□□□□ 0.36
HOXD3-202ENST00000410016 PGRMC1O00264 195 aaKnown RBP17.29■□□□□ 0.36
HOXD3-202ENST00000410016 EIF3HO15372 352 aaKnown RBP eCLIP17.29■□□□□ 0.36
HOXD3-202ENST00000410016 SPDYE6P0CI01 402 aa17.29■□□□□ 0.36
HOXD3-202ENST00000410016 SF3B2Q13435 895 aaKnown RBP17.29■□□□□ 0.36
HOXD3-202ENST00000410016 ODR4Q5SWX8 454 aa17.29■□□□□ 0.36
HOXD3-202ENST00000410016 EMC10Q5UCC4 262 aa17.29■□□□□ 0.36
HOXD3-202ENST00000410016 HS2ST1Q7LGA3 356 aa17.29■□□□□ 0.36
HOXD3-202ENST00000410016 GLYCTKQ8IVS8 523 aa17.29■□□□□ 0.36
HOXD3-202ENST00000410016 DAW1Q8N136 415 aa17.29■□□□□ 0.36
HOXD3-202ENST00000410016 CHURC1Q8WUH1 139 aa17.29■□□□□ 0.36
HOXD3-202ENST00000410016 AP1M1Q9BXS5 423 aa17.29■□□□□ 0.36
HOXD3-202ENST00000410016 WDR11Q9BZH6 1224 aa17.29■□□□□ 0.36
HOXD3-202ENST00000410016 TSPYL1Q9H0U9 437 aa17.29■□□□□ 0.36
HOXD3-202ENST00000410016 ZBTB21Q9ULJ3 1066 aa17.29■□□□□ 0.36
HOXD3-202ENST00000410016 MRPL11Q9Y3B7 192 aaKnown RBP17.29■□□□□ 0.36
HOXD3-202ENST00000410016 APBA3O96018 575 aa17.28■□□□□ 0.36
HOXD3-202ENST00000410016 GUCY2CP25092 1073 aa17.28■□□□□ 0.36
HOXD3-202ENST00000410016 HSPA9P38646 679 aaKnown RBP17.28■□□□□ 0.36
HOXD3-202ENST00000410016 MAPK7Q13164 816 aa17.28■□□□□ 0.36
HOXD3-202ENST00000410016 PPP2R5AQ15172 486 aa17.28■□□□□ 0.36
HOXD3-202ENST00000410016 SH2D3CQ8N5H7 860 aa17.28■□□□□ 0.36
HOXD3-202ENST00000410016 NOC2LQ9Y3T9 749 aaKnown RBP17.28■□□□□ 0.36
HOXD3-202ENST00000410016 CLRN2A0PK11 232 aa17.28■□□□□ 0.36
HOXD3-202ENST00000410016 PLA2G6O60733 806 aa17.28■□□□□ 0.36
HOXD3-202ENST00000410016 TRIM49P0CI25 452 aa17.28■□□□□ 0.36
HOXD3-202ENST00000410016 TRIM49CP0CI26 452 aa17.28■□□□□ 0.36
HOXD3-202ENST00000410016 CYP2J2P51589 502 aa17.28■□□□□ 0.36
HOXD3-202ENST00000410016 KCTD16Q68DU8 428 aa17.28■□□□□ 0.36
HOXD3-202ENST00000410016 DAAM2Q86T65 1068 aa17.28■□□□□ 0.36
HOXD3-202ENST00000410016 SLC9A9Q8IVB4 645 aa17.28■□□□□ 0.36
HOXD3-202ENST00000410016 C10orf67Q8IYJ2 551 aa17.28■□□□□ 0.36
HOXD3-202ENST00000410016 SYCE1Q8N0S2 351 aa17.28■□□□□ 0.36
HOXD3-202ENST00000410016 LMO3Q8TAP4 145 aa17.28■□□□□ 0.36
HOXD3-202ENST00000410016 CNKSR1Q969H4 720 aa17.28■□□□□ 0.36
HOXD3-202ENST00000410016 LXNQ9BS40 222 aa17.28■□□□□ 0.36
HOXD3-202ENST00000410016 OSGEPQ9NPF4 335 aa17.28■□□□□ 0.36
HOXD3-202ENST00000410016 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.28■□□□□ 0.36
HOXD3-202ENST00000410016 FRMD4BQ9Y2L6 1034 aa17.28■□□□□ 0.36
HOXD3-202ENST00000410016 TMCO5BA8MYB1 307 aa17.27■□□□□ 0.36
HOXD3-202ENST00000410016 IPO5O00410 1097 aaKnown RBP17.27■□□□□ 0.36
HOXD3-202ENST00000410016 ITGA4P13612 1032 aa17.27■□□□□ 0.36
HOXD3-202ENST00000410016 LMNB1P20700 586 aa17.27■□□□□ 0.36
HOXD3-202ENST00000410016 PPATQ06203 517 aa17.27■□□□□ 0.36
HOXD3-202ENST00000410016 DNAJC21Q5F1R6 531 aaKnown RBP17.27■□□□□ 0.36
HOXD3-202ENST00000410016 BANK1Q8NDB2 785 aa17.27■□□□□ 0.36
HOXD3-202ENST00000410016 C1orf131Q8NDD1 294 aaKnown RBP17.27■□□□□ 0.36
HOXD3-202ENST00000410016 SLC35G2Q8TBE7 412 aa17.27■□□□□ 0.36
HOXD3-202ENST00000410016 FAM151AQ8WW52 585 aa17.27■□□□□ 0.36
HOXD3-202ENST00000410016 DEFB129Q9H1M3 183 aa17.27■□□□□ 0.36
HOXD3-202ENST00000410016 VCPKMTQ9H867 229 aa17.27■□□□□ 0.36
HOXD3-202ENST00000410016 APEX2Q9UBZ4 518 aa17.27■□□□□ 0.36
HOXD3-202ENST00000410016 BUB1BO60566 1050 aaPredicted RBP17.26■□□□□ 0.35
HOXD3-202ENST00000410016 GNGT1P63211 74 aa17.26■□□□□ 0.35
HOXD3-202ENST00000410016 CUL1Q13616 776 aa17.26■□□□□ 0.35
HOXD3-202ENST00000410016 PHLDB3Q6NSJ2 640 aa17.26■□□□□ 0.35
HOXD3-202ENST00000410016 STXBP4Q6ZWJ1 553 aa17.26■□□□□ 0.35
HOXD3-202ENST00000410016 LDHDQ86WU2 507 aa17.26■□□□□ 0.35
HOXD3-202ENST00000410016 INTS2Q9H0H0 1204 aaKnown RBP17.26■□□□□ 0.35
HOXD3-202ENST00000410016 DDX47Q9H0S4 455 aaKnown RBP17.26■□□□□ 0.35
HOXD3-202ENST00000410016 FBXO28Q9NVF7 368 aa17.26■□□□□ 0.35
HOXD3-202ENST00000410016 RBBP6Q7Z6E9 1792 aaKnown RBP17.26■□□□□ 0.35
HOXD3-202ENST00000410016 CCDC188H7C350 402 aa17.26■□□□□ 0.35
HOXD3-202ENST00000410016 TMEM253P0C7T8 217 aa17.26■□□□□ 0.35
HOXD3-202ENST00000410016 ITGB5P18084 799 aa17.26■□□□□ 0.35
HOXD3-202ENST00000410016 SETQ01105 290 aaPredicted RBP17.26■□□□□ 0.35
HOXD3-202ENST00000410016 SLC20A2Q08357 652 aa17.26■□□□□ 0.35
HOXD3-202ENST00000410016 DDX42Q86XP3 938 aaKnown RBP eCLIP17.26■□□□□ 0.35
HOXD3-202ENST00000410016 PROCA1Q8NCQ7 364 aaPredicted RBP17.26■□□□□ 0.35
HOXD3-202ENST00000410016 ZNF70Q9UC06 446 aaPredicted RBP17.26■□□□□ 0.35
HOXD3-202ENST00000410016 TTC7AQ9ULT0 858 aaPredicted RBP17.26■□□□□ 0.35
HOXD3-202ENST00000410016 NCANO14594 1321 aa17.26■□□□□ 0.35
HOXD3-202ENST00000410016 CNTNAP1P78357 1384 aa17.26■□□□□ 0.35
HOXD3-202ENST00000410016 KRIT1O00522 736 aa17.25■□□□□ 0.35
HOXD3-202ENST00000410016 PPIP5K2O43314 1243 aa17.25■□□□□ 0.35
HOXD3-202ENST00000410016 HIP1RO75146 1068 aa17.25■□□□□ 0.35
HOXD3-202ENST00000410016 CORO7P57737 925 aa17.25■□□□□ 0.35
HOXD3-202ENST00000410016 BFSP1Q12934 665 aa17.25■□□□□ 0.35
HOXD3-202ENST00000410016 TTC19Q6DKK2 380 aaPredicted RBP17.25■□□□□ 0.35
HOXD3-202ENST00000410016 CDAN1Q8IWY9 1227 aa17.25■□□□□ 0.35
HOXD3-202ENST00000410016 RFFLQ8WZ73 363 aa17.25■□□□□ 0.35
HOXD3-202ENST00000410016 RIT2Q99578 217 aa17.25■□□□□ 0.35
HOXD3-202ENST00000410016 MXRA8Q9BRK3 442 aa17.25■□□□□ 0.35
HOXD3-202ENST00000410016 TEKT3Q9BXF9 490 aa17.25■□□□□ 0.35
HOXD3-202ENST00000410016 RASSF4Q9H2L5 321 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms