RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 USTQ9Y2C2 406 aa18.97■□□□□ 0.63
CHMP3-203ENST00000409225 SH2B2O14492 632 aaPredicted RBP18.96■□□□□ 0.63
CHMP3-203ENST00000409225 NPR3P17342 541 aa18.96■□□□□ 0.63
CHMP3-203ENST00000409225 ZNF76P36508 570 aa18.96■□□□□ 0.63
CHMP3-203ENST00000409225 CLCN3P51790 818 aa18.96■□□□□ 0.63
CHMP3-203ENST00000409225 MIS18BP1Q6P0N0 1132 aa18.96■□□□□ 0.63
CHMP3-203ENST00000409225 KCNG4Q8TDN1 519 aa18.96■□□□□ 0.63
CHMP3-203ENST00000409225 ANO3Q9BYT9 981 aa18.96■□□□□ 0.63
CHMP3-203ENST00000409225 FBXL21Q9UKT6 434 aa18.96■□□□□ 0.63
CHMP3-203ENST00000409225 AKT3Q9Y243 479 aa18.96■□□□□ 0.63
CHMP3-203ENST00000409225 MEIS1O00470 390 aa18.95■□□□□ 0.62
CHMP3-203ENST00000409225 GSPT1P15170 499 aaKnown RBP18.95■□□□□ 0.62
CHMP3-203ENST00000409225 ALDH7A1P49419 539 aaKnown RBP18.95■□□□□ 0.62
CHMP3-203ENST00000409225 NAPAP54920 295 aa18.95■□□□□ 0.62
CHMP3-203ENST00000409225 BCAR1P56945 870 aa18.95■□□□□ 0.62
CHMP3-203ENST00000409225 NLRP11P59045 1033 aaKnown RBP18.95■□□□□ 0.62
CHMP3-203ENST00000409225 WWC2Q6AWC2 1192 aa18.95■□□□□ 0.62
CHMP3-203ENST00000409225 TMC5Q6UXY8 1006 aa18.95■□□□□ 0.62
CHMP3-203ENST00000409225 TMTC3Q6ZXV5 915 aa18.95■□□□□ 0.62
CHMP3-203ENST00000409225 VPS52Q8N1B4 723 aa18.95■□□□□ 0.62
CHMP3-203ENST00000409225 DTWD2Q8NBA8 298 aa18.95■□□□□ 0.62
CHMP3-203ENST00000409225 TMEM169Q96HH4 297 aa18.95■□□□□ 0.62
CHMP3-203ENST00000409225 ZNF668Q96K58 619 aaPredicted RBP18.95■□□□□ 0.62
CHMP3-203ENST00000409225 CALM1P0DP23 149 aa18.94■□□□□ 0.62
CHMP3-203ENST00000409225 CALM2P0DP24 149 aa18.94■□□□□ 0.62
CHMP3-203ENST00000409225 CALM3P0DP25 149 aa18.94■□□□□ 0.62
CHMP3-203ENST00000409225 CHMLP26374 656 aa18.94■□□□□ 0.62
CHMP3-203ENST00000409225 CABP7Q86V35 215 aa18.94■□□□□ 0.62
CHMP3-203ENST00000409225 SIX5Q8N196 739 aa18.94■□□□□ 0.62
CHMP3-203ENST00000409225 TMTC2Q8N394 836 aa18.94■□□□□ 0.62
CHMP3-203ENST00000409225 BBXQ8WY36 941 aaPredicted RBP18.94■□□□□ 0.62
CHMP3-203ENST00000409225 ACSF2Q96CM8 615 aaPredicted RBP18.94■□□□□ 0.62
CHMP3-203ENST00000409225 RTP3Q9BQQ7 232 aa18.94■□□□□ 0.62
CHMP3-203ENST00000409225 ZBP1Q9H171 429 aa18.94■□□□□ 0.62
CHMP3-203ENST00000409225 RIC8AQ9NPQ8 531 aa18.94■□□□□ 0.62
CHMP3-203ENST00000409225 MED19A0JLT2 244 aaPredicted RBP18.93■□□□□ 0.62
CHMP3-203ENST00000409225 SPDYE4A6NLX3 237 aa18.93■□□□□ 0.62
CHMP3-203ENST00000409225 FOSP01100 380 aaPredicted RBP18.93■□□□□ 0.62
CHMP3-203ENST00000409225 FGFR4P22455 802 aa18.93■□□□□ 0.62
CHMP3-203ENST00000409225 TDGQ13569 410 aa18.93■□□□□ 0.62
CHMP3-203ENST00000409225 TTC22Q5TAA0 569 aa18.93■□□□□ 0.62
CHMP3-203ENST00000409225 TYW1BQ6NUM6 668 aa18.93■□□□□ 0.62
CHMP3-203ENST00000409225 PLA2G4DQ86XP0 818 aa18.93■□□□□ 0.62
CHMP3-203ENST00000409225 RMDN1Q96DB5 314 aa18.93■□□□□ 0.62
CHMP3-203ENST00000409225 MAP7D2Q96T17 732 aa18.93■□□□□ 0.62
CHMP3-203ENST00000409225 MRPL9Q9BYD2 267 aaKnown RBP18.93■□□□□ 0.62
CHMP3-203ENST00000409225 ADAMTS10Q9H324 1103 aa18.93■□□□□ 0.62
CHMP3-203ENST00000409225 SLC12A7Q9Y666 1083 aa18.93■□□□□ 0.62
CHMP3-203ENST00000409225 DHX15O43143 795 aaKnown RBP18.92■□□□□ 0.62
CHMP3-203ENST00000409225 ZC3H11AO75152 810 aaKnown RBP eCLIP18.92■□□□□ 0.62
CHMP3-203ENST00000409225 KCNA4P22459 653 aa18.92■□□□□ 0.62
CHMP3-203ENST00000409225 MCM5P33992 734 aa18.92■□□□□ 0.62
CHMP3-203ENST00000409225 SREBF1P36956 1147 aa18.92■□□□□ 0.62
CHMP3-203ENST00000409225 ADCY7P51828 1080 aa18.92■□□□□ 0.62
CHMP3-203ENST00000409225 AAMPQ13685 434 aa18.92■□□□□ 0.62
CHMP3-203ENST00000409225 COL9A3Q14050 684 aaPredicted RBP18.92■□□□□ 0.62
CHMP3-203ENST00000409225 EFCAB12Q6NXP0 572 aa18.92■□□□□ 0.62
CHMP3-203ENST00000409225 CCDC149Q6ZUS6 474 aa18.92■□□□□ 0.62
CHMP3-203ENST00000409225 OTOP3Q7RTS5 596 aa18.92■□□□□ 0.62
CHMP3-203ENST00000409225 ZNF598Q86UK7 904 aaKnown RBP18.92■□□□□ 0.62
CHMP3-203ENST00000409225 TMEM173Q86WV6 379 aaPredicted RBP18.92■□□□□ 0.62
CHMP3-203ENST00000409225 LRRC71Q8N4P6 559 aa18.92■□□□□ 0.62
CHMP3-203ENST00000409225 SLC22A17Q8WUG5 538 aa18.92■□□□□ 0.62
CHMP3-203ENST00000409225 TMEM87BQ96K49 555 aa18.92■□□□□ 0.62
CHMP3-203ENST00000409225 MTA3Q9BTC8 594 aa18.92■□□□□ 0.62
CHMP3-203ENST00000409225 DUSP12Q9UNI6 340 aa18.92■□□□□ 0.62
CHMP3-203ENST00000409225 RBM8AQ9Y5S9 174 aaKnown RBP18.92■□□□□ 0.62
CHMP3-203ENST00000409225 DENND4AQ7Z401 1863 aa18.92■□□□□ 0.62
CHMP3-203ENST00000409225 A0A0U1RQF3 1178 aa18.91■□□□□ 0.62
CHMP3-203ENST00000409225 FAM86B1E9PN63 330 aa18.91■□□□□ 0.62
CHMP3-203ENST00000409225 STK25O00506 426 aa18.91■□□□□ 0.62
CHMP3-203ENST00000409225 FAM86B2P0C5J1 330 aa18.91■□□□□ 0.62
CHMP3-203ENST00000409225 EIF4BP23588 611 aaKnown RBP18.91■□□□□ 0.62
CHMP3-203ENST00000409225 NIPA1Q7RTP0 329 aa18.91■□□□□ 0.62
CHMP3-203ENST00000409225 DGLUCYQ7Z3D6 616 aa18.91■□□□□ 0.62
CHMP3-203ENST00000409225 MICU3Q86XE3 530 aa18.91■□□□□ 0.62
CHMP3-203ENST00000409225 KIAA2013Q8IYS2 634 aa18.91■□□□□ 0.62
CHMP3-203ENST00000409225 FANCBQ8NB91 859 aa18.91■□□□□ 0.62
CHMP3-203ENST00000409225 MAP4K1Q92918 833 aa18.91■□□□□ 0.62
CHMP3-203ENST00000409225 SCLT1Q96NL6 688 aa18.91■□□□□ 0.62
CHMP3-203ENST00000409225 LRRC2Q9BYS8 371 aa18.91■□□□□ 0.62
CHMP3-203ENST00000409225 SFXN1Q9H9B4 322 aa18.91■□□□□ 0.62
CHMP3-203ENST00000409225 KCNK12Q9HB15 430 aa18.91■□□□□ 0.62
CHMP3-203ENST00000409225 MAFBQ9Y5Q3 323 aaPredicted RBP18.91■□□□□ 0.62
CHMP3-203ENST00000409225 EP300Q09472 2414 aaPredicted RBP18.91■□□□□ 0.62
CHMP3-203ENST00000409225 IPO5O00410 1097 aaKnown RBP18.9■□□□□ 0.62
CHMP3-203ENST00000409225 MAGEB2O15479 319 aa18.9■□□□□ 0.62
CHMP3-203ENST00000409225 SGSM2O43147 1006 aa18.9■□□□□ 0.62
CHMP3-203ENST00000409225 LMNAP02545 664 aaKnown RBP18.9■□□□□ 0.62
CHMP3-203ENST00000409225 CTSAP10619 480 aa18.9■□□□□ 0.62
CHMP3-203ENST00000409225 TMOD1P28289 359 aa18.9■□□□□ 0.62
CHMP3-203ENST00000409225 LIFRP42702 1097 aa18.9■□□□□ 0.62
CHMP3-203ENST00000409225 GIT2Q14161 759 aa18.9■□□□□ 0.62
CHMP3-203ENST00000409225 PPP1R18Q6NYC8 613 aa18.9■□□□□ 0.62
CHMP3-203ENST00000409225 GPR149Q86SP6 731 aa18.9■□□□□ 0.62
CHMP3-203ENST00000409225 DDX53Q86TM3 631 aaKnown RBP18.9■□□□□ 0.62
CHMP3-203ENST00000409225 BCL7CQ8WUZ0 217 aaPredicted RBP18.9■□□□□ 0.62
CHMP3-203ENST00000409225 GABBR1Q9UBS5 961 aa18.9■□□□□ 0.62
CHMP3-203ENST00000409225 TCEAL9Q9UHQ7 104 aa18.9■□□□□ 0.62
CHMP3-203ENST00000409225 CEP131Q9UPN4 1083 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms