RNA–Protein interactions for RNA: ENST00000405692.2

PDGFA-204, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-204ENST00000405692 ST3GAL5Q9UNP4 418 aa23.19■■□□□ 1.3
PDGFA-204ENST00000405692 YBX2Q9Y2T7 364 aaKnown RBP23.19■■□□□ 1.3
PDGFA-204ENST00000405692 INSL6Q9Y581 213 aa23.19■■□□□ 1.3
PDGFA-204ENST00000405692 COL4A3BPQ9Y5P4 624 aa23.19■■□□□ 1.3
PDGFA-204ENST00000405692 SIP14410 1827 aa23.19■■□□□ 1.3
PDGFA-204ENST00000405692 VWA3AA6NCI4 1184 aa23.18■■□□□ 1.3
PDGFA-204ENST00000405692 DARSP14868 501 aaKnown RBP23.18■■□□□ 1.3
PDGFA-204ENST00000405692 MXD4Q14582 209 aaPredicted RBP23.18■■□□□ 1.3
PDGFA-204ENST00000405692 SF3A1Q15459 793 aaKnown RBP23.18■■□□□ 1.3
PDGFA-204ENST00000405692 PPP2R2DQ66LE6 453 aa23.18■■□□□ 1.3
PDGFA-204ENST00000405692 POTEGQ6S5H5 508 aa23.18■■□□□ 1.3
PDGFA-204ENST00000405692 FAM228AQ86W67 206 aa23.18■■□□□ 1.3
PDGFA-204ENST00000405692 KCTD17Q8N5Z5 321 aa23.18■■□□□ 1.3
PDGFA-204ENST00000405692 AK8Q96MA6 479 aa23.18■■□□□ 1.3
PDGFA-204ENST00000405692 TSPYL2Q9H2G4 693 aaPredicted RBP23.18■■□□□ 1.3
PDGFA-204ENST00000405692 MTMR10Q9NXD2 777 aa23.18■■□□□ 1.3
PDGFA-204ENST00000405692 DENND3A2RUS2 1198 aa23.17■■□□□ 1.3
PDGFA-204ENST00000405692 ARHGEF35A5YM69 484 aa23.17■■□□□ 1.3
PDGFA-204ENST00000405692 IL17AQ16552 155 aa23.17■■□□□ 1.3
PDGFA-204ENST00000405692 MCPH1Q8NEM0 835 aa23.17■■□□□ 1.3
PDGFA-204ENST00000405692 PRPF31Q8WWY3 499 aaKnown RBP23.17■■□□□ 1.3
PDGFA-204ENST00000405692 TMEM143Q96AN5 459 aa23.17■■□□□ 1.3
PDGFA-204ENST00000405692 NLRP4Q96MN2 994 aa23.17■■□□□ 1.3
PDGFA-204ENST00000405692 FAM161BQ96MY7 647 aa23.17■■□□□ 1.3
PDGFA-204ENST00000405692 TTYH1Q9H313 450 aaPredicted RBP23.17■■□□□ 1.3
PDGFA-204ENST00000405692 C1orf112Q9NSG2 853 aa23.17■■□□□ 1.3
PDGFA-204ENST00000405692 KIAA1024Q9UPX6 916 aa23.17■■□□□ 1.3
PDGFA-204ENST00000405692 MICAL3Q7RTP6 2002 aa23.16■■□□□ 1.3
PDGFA-204ENST00000405692 A0A087WZ62 844 aa23.16■■□□□ 1.3
PDGFA-204ENST00000405692 SLC26A4O43511 780 aa23.16■■□□□ 1.3
PDGFA-204ENST00000405692 UPP2O95045 317 aa23.16■■□□□ 1.3
PDGFA-204ENST00000405692 CA3P07451 260 aa23.16■■□□□ 1.3
PDGFA-204ENST00000405692 STAG3L1P0CL83 205 aa23.16■■□□□ 1.3
PDGFA-204ENST00000405692 ZSCAN20P17040 1043 aaPredicted RBP23.16■■□□□ 1.3
PDGFA-204ENST00000405692 SFPQP23246 707 aaKnown RBP eCLIP23.16■■□□□ 1.3
PDGFA-204ENST00000405692 BECN1Q14457 450 aa23.16■■□□□ 1.3
PDGFA-204ENST00000405692 FAM117BQ6P1L5 589 aa23.16■■□□□ 1.3
PDGFA-204ENST00000405692 FDXACB1Q9BRP7 624 aaPredicted RBP23.16■■□□□ 1.3
PDGFA-204ENST00000405692 NT5C3AQ9H0P0 336 aa23.16■■□□□ 1.3
PDGFA-204ENST00000405692 BMP2KQ9NSY1 1161 aaPredicted RBP23.16■■□□□ 1.3
PDGFA-204ENST00000405692 DNM3Q9UQ16 869 aa23.16■■□□□ 1.3
PDGFA-204ENST00000405692 USO1O60763 962 aaKnown RBP23.15■■□□□ 1.3
PDGFA-204ENST00000405692 MYOGP15173 224 aa23.15■■□□□ 1.3
PDGFA-204ENST00000405692 LAMTOR4Q0VGL1 99 aa23.15■■□□□ 1.3
PDGFA-204ENST00000405692 TFDP1Q14186 410 aa23.15■■□□□ 1.3
PDGFA-204ENST00000405692 TMCO2Q7Z6W1 182 aaPredicted RBP23.15■■□□□ 1.3
PDGFA-204ENST00000405692 CDK5RAP3Q96JB5 506 aa23.15■■□□□ 1.3
PDGFA-204ENST00000405692 ZNF668Q96K58 619 aaPredicted RBP23.15■■□□□ 1.3
PDGFA-204ENST00000405692 YME1L1Q96TA2 773 aa23.15■■□□□ 1.3
PDGFA-204ENST00000405692 TMX1Q9H3N1 280 aa23.15■■□□□ 1.3
PDGFA-204ENST00000405692 DDX19AQ9NUU7 478 aaKnown RBP23.15■■□□□ 1.3
PDGFA-204ENST00000405692 SLC34A2O95436 690 aa23.14■■□□□ 1.29
PDGFA-204ENST00000405692 LONP1P36776 959 aaKnown RBP23.14■■□□□ 1.29
PDGFA-204ENST00000405692 HTRA4P83105 476 aaPredicted RBP23.14■■□□□ 1.29
PDGFA-204ENST00000405692 SLC24A5Q71RS6 500 aa23.14■■□□□ 1.29
PDGFA-204ENST00000405692 SRGAP1Q7Z6B7 1085 aa23.14■■□□□ 1.29
PDGFA-204ENST00000405692 NPAS4Q8IUM7 802 aa23.14■■□□□ 1.29
PDGFA-204ENST00000405692 ADAM2Q99965 735 aa23.14■■□□□ 1.29
PDGFA-204ENST00000405692 XPNPEP1Q9NQW7 623 aa23.14■■□□□ 1.29
PDGFA-204ENST00000405692 RGS18Q9NS28 235 aa23.14■■□□□ 1.29
PDGFA-204ENST00000405692 LRFN2Q9ULH4 789 aa23.14■■□□□ 1.29
PDGFA-204ENST00000405692 LAMA3Q16787 3333 aa23.14■■□□□ 1.29
PDGFA-204ENST00000405692 A0A087WWV3 80 aa23.13■■□□□ 1.29
PDGFA-204ENST00000405692 PP2D1A8MPX8 630 aa23.13■■□□□ 1.29
PDGFA-204ENST00000405692 SRGAP2CP0DJJ0 459 aa23.13■■□□□ 1.29
PDGFA-204ENST00000405692 UBA7P41226 1012 aa23.13■■□□□ 1.29
PDGFA-204ENST00000405692 PHKA2P46019 1235 aa23.13■■□□□ 1.29
PDGFA-204ENST00000405692 SARSP49591 514 aaKnown RBP23.13■■□□□ 1.29
PDGFA-204ENST00000405692 POU5F1BQ06416 359 aa23.13■■□□□ 1.29
PDGFA-204ENST00000405692 PCBP1Q15365 356 aaKnown RBP eCLIP23.13■■□□□ 1.29
PDGFA-204ENST00000405692 PADI6Q6TGC4 694 aa23.13■■□□□ 1.29
PDGFA-204ENST00000405692 RTN4RL1Q86UN2 441 aaPredicted RBP23.13■■□□□ 1.29
PDGFA-204ENST00000405692 KSR1Q8IVT5 923 aa23.13■■□□□ 1.29
PDGFA-204ENST00000405692 SPRYD3Q8NCJ5 442 aa23.13■■□□□ 1.29
PDGFA-204ENST00000405692 LINC01599Q8WXQ3 324 aa23.13■■□□□ 1.29
PDGFA-204ENST00000405692 ZNF396Q96N95 335 aaPredicted RBP23.13■■□□□ 1.29
PDGFA-204ENST00000405692 BHMT2Q9H2M3 363 aa23.13■■□□□ 1.29
PDGFA-204ENST00000405692 CHST12Q9NRB3 414 aa23.13■■□□□ 1.29
PDGFA-204ENST00000405692 DACT1Q9NYF0 836 aa23.13■■□□□ 1.29
PDGFA-204ENST00000405692 CLIC4Q9Y696 253 aa23.13■■□□□ 1.29
PDGFA-204ENST00000405692 EYA4O95677 639 aa23.12■■□□□ 1.29
PDGFA-204ENST00000405692 CDC25AP30304 524 aa23.12■■□□□ 1.29
PDGFA-204ENST00000405692 ARL2P36404 184 aa23.12■■□□□ 1.29
PDGFA-204ENST00000405692 ECM1Q16610 540 aa23.12■■□□□ 1.29
PDGFA-204ENST00000405692 HYIQ5T013 277 aa23.12■■□□□ 1.29
PDGFA-204ENST00000405692 RNF149Q8NC42 400 aa23.12■■□□□ 1.29
PDGFA-204ENST00000405692 CALML4Q96GE6 196 aa23.12■■□□□ 1.29
PDGFA-204ENST00000405692 IFT122Q9HBG6 1241 aa23.12■■□□□ 1.29
PDGFA-204ENST00000405692 PCDHB7Q9Y5E2 793 aa23.12■■□□□ 1.29
PDGFA-204ENST00000405692 ARID2Q68CP9 1835 aa23.12■■□□□ 1.29
PDGFA-204ENST00000405692 ZSCAN22P10073 491 aaPredicted RBP23.11■■□□□ 1.29
PDGFA-204ENST00000405692 CYP11B2P19099 503 aa23.11■■□□□ 1.29
PDGFA-204ENST00000405692 TAP1Q03518 808 aa23.11■■□□□ 1.29
PDGFA-204ENST00000405692 DSC3Q14574 896 aa23.11■■□□□ 1.29
PDGFA-204ENST00000405692 GRIN2CQ14957 1233 aa23.11■■□□□ 1.29
PDGFA-204ENST00000405692 ZRSR1Q15695 479 aaKnown RBP23.11■■□□□ 1.29
PDGFA-204ENST00000405692 FAM173BQ6P4H8 233 aa23.11■■□□□ 1.29
PDGFA-204ENST00000405692 CATSPER4Q7RTX7 472 aa23.11■■□□□ 1.29
PDGFA-204ENST00000405692 CABP7Q86V35 215 aa23.11■■□□□ 1.29
PDGFA-204ENST00000405692 CDX2Q99626 313 aaPredicted RBP23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms