RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 ADAM30Q9UKF2 790 aa15.7■□□□□ 0.1
CCDC50-201ENST00000392455 MICAL3Q7RTP6 2002 aa15.69■□□□□ 0.1
CCDC50-201ENST00000392455 SAC3D1A6NKF1 404 aa15.69■□□□□ 0.1
CCDC50-201ENST00000392455 CFLARO15519 480 aa15.69■□□□□ 0.1
CCDC50-201ENST00000392455 AP1S2P56377 157 aa15.69■□□□□ 0.1
CCDC50-201ENST00000392455 SLC7A5P2Q9GIP4 190 aa15.69■□□□□ 0.1
CCDC50-201ENST00000392455 FRMD3A2A2Y4 597 aa15.69■□□□□ 0.1
CCDC50-201ENST00000392455 PLS3P13797 630 aa15.69■□□□□ 0.1
CCDC50-201ENST00000392455 GCFC2P16383 781 aaKnown RBP15.69■□□□□ 0.1
CCDC50-201ENST00000392455 TRIP4Q15650 581 aaPredicted RBP15.69■□□□□ 0.1
CCDC50-201ENST00000392455 ACRBPQ8NEB7 543 aa15.69■□□□□ 0.1
CCDC50-201ENST00000392455 PPP1R13BQ96KQ4 1090 aa15.69■□□□□ 0.1
CCDC50-201ENST00000392455 TSC22D4Q9Y3Q8 395 aa15.69■□□□□ 0.1
CCDC50-201ENST00000392455 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.69■□□□□ 0.1
CCDC50-201ENST00000392455 TESK2Q96S53 571 aa15.69■□□□□ 0.1
CCDC50-201ENST00000392455 BFSP2Q13515 415 aa15.69■□□□□ 0.1
CCDC50-201ENST00000392455 LRRC8AQ8IWT6 810 aa15.69■□□□□ 0.1
CCDC50-201ENST00000392455 SULF1Q8IWU6 871 aa15.69■□□□□ 0.1
CCDC50-201ENST00000392455 APPL2Q8NEU8 664 aa15.69■□□□□ 0.1
CCDC50-201ENST00000392455 CDC26Q8NHZ8 85 aa15.69■□□□□ 0.1
CCDC50-201ENST00000392455 RBM41Q96IZ5 413 aaKnown RBP15.69■□□□□ 0.1
CCDC50-201ENST00000392455 SRPK1Q96SB4 655 aaKnown RBP15.69■□□□□ 0.1
CCDC50-201ENST00000392455 DDX50Q9BQ39 737 aaKnown RBP15.69■□□□□ 0.1
CCDC50-201ENST00000392455 RHOBTB1O94844 696 aa15.69■□□□□ 0.1
CCDC50-201ENST00000392455 GNL1P36915 607 aaPredicted RBP15.69■□□□□ 0.1
CCDC50-201ENST00000392455 ARL4CP56559 192 aa15.69■□□□□ 0.1
CCDC50-201ENST00000392455 EIF4A1P60842 406 aaKnown RBP15.69■□□□□ 0.1
CCDC50-201ENST00000392455 ADAM9Q13443 819 aa15.69■□□□□ 0.1
CCDC50-201ENST00000392455 RASGRF1Q13972 1273 aa15.69■□□□□ 0.1
CCDC50-201ENST00000392455 ABCC12Q96J65 1359 aa15.69■□□□□ 0.1
CCDC50-201ENST00000392455 MYH9P35579 1960 aaKnown RBP15.69■□□□□ 0.1
CCDC50-201ENST00000392455 ADCY9O60503 1353 aa15.69■□□□□ 0.1
CCDC50-201ENST00000392455 ZBTB38Q8NAP3 1195 aaPredicted RBP15.69■□□□□ 0.1
CCDC50-201ENST00000392455 TUBGCP2Q9BSJ2 902 aa15.69■□□□□ 0.1
CCDC50-201ENST00000392455 GCC2Q8IWJ2 1684 aa15.69■□□□□ 0.1
CCDC50-201ENST00000392455 E5RI56 91 aa15.68■□□□□ 0.1
CCDC50-201ENST00000392455 CSPG5O95196 566 aa15.68■□□□□ 0.1
CCDC50-201ENST00000392455 PPHLN1Q8NEY8 458 aaKnown RBP15.68■□□□□ 0.1
CCDC50-201ENST00000392455 SLC7A3Q8WY07 619 aa15.68■□□□□ 0.1
CCDC50-201ENST00000392455 INSRP06213 1382 aa15.68■□□□□ 0.1
CCDC50-201ENST00000392455 A0A0D9SFI3 127 aa15.68■□□□□ 0.1
CCDC50-201ENST00000392455 PJA2O43164 708 aa15.68■□□□□ 0.1
CCDC50-201ENST00000392455 SNAP25P60880 206 aa15.68■□□□□ 0.1
CCDC50-201ENST00000392455 DMTNQ08495 405 aa15.68■□□□□ 0.1
CCDC50-201ENST00000392455 ABCB5Q2M3G0 1257 aa15.68■□□□□ 0.1
CCDC50-201ENST00000392455 SNX30Q5VWJ9 437 aa15.68■□□□□ 0.1
CCDC50-201ENST00000392455 PLEKHA8Q96JA3 519 aa15.68■□□□□ 0.1
CCDC50-201ENST00000392455 ACAP3Q96P50 834 aa15.68■□□□□ 0.1
CCDC50-201ENST00000392455 PPCSQ9HAB8 311 aa15.68■□□□□ 0.1
CCDC50-201ENST00000392455 ZBTB12Q9Y330 459 aaPredicted RBP15.68■□□□□ 0.1
CCDC50-201ENST00000392455 ZNF500O60304 480 aaPredicted RBP15.68■□□□□ 0.1
CCDC50-201ENST00000392455 MYLK2Q9H1R3 596 aa15.68■□□□□ 0.1
CCDC50-201ENST00000392455 FANCBQ8NB91 859 aa15.68■□□□□ 0.1
CCDC50-201ENST00000392455 L3MBTL3Q96JM7 780 aaPredicted RBP15.68■□□□□ 0.1
CCDC50-201ENST00000392455 LMBRD1Q9NUN5 540 aa15.68■□□□□ 0.1
CCDC50-201ENST00000392455 PSD3Q9NYI0 1048 aa15.68■□□□□ 0.1
CCDC50-201ENST00000392455 ELF1P32519 619 aa15.68■□□□□ 0.1
CCDC50-201ENST00000392455 TMPRSS15P98073 1019 aa15.68■□□□□ 0.1
CCDC50-201ENST00000392455 SYMPKQ92797 1274 aaKnown RBP15.68■□□□□ 0.1
CCDC50-201ENST00000392455 ATG3Q9NT62 314 aa15.68■□□□□ 0.1
CCDC50-201ENST00000392455 ATP8A1Q9Y2Q0 1164 aa15.68■□□□□ 0.1
CCDC50-201ENST00000392455 XPO6Q96QU8 1125 aaKnown RBP15.68■□□□□ 0.1
CCDC50-201ENST00000392455 WDR62O43379 1518 aa15.68■□□□□ 0.1
CCDC50-201ENST00000392455 ATXN8OSP0DMR3 200 aa15.68■□□□□ 0.1
CCDC50-201ENST00000392455 IFNAR2P48551 515 aa15.68■□□□□ 0.1
CCDC50-201ENST00000392455 MICALL2Q8IY33 904 aa15.68■□□□□ 0.1
CCDC50-201ENST00000392455 TNKSO95271 1327 aa15.68■□□□□ 0.1
CCDC50-201ENST00000392455 C5orf58C9J3I9 102 aa15.67■□□□□ 0.1
CCDC50-201ENST00000392455 LRRC31Q6UY01 552 aa15.67■□□□□ 0.1
CCDC50-201ENST00000392455 LRRC49Q8IUZ0 686 aa15.67■□□□□ 0.1
CCDC50-201ENST00000392455 HNRNPDLO14979 420 aaKnown RBP15.67■□□□□ 0.1
CCDC50-201ENST00000392455 DDAH1O94760 285 aa15.67■□□□□ 0.1
CCDC50-201ENST00000392455 BAG6P46379 1132 aa15.67■□□□□ 0.1
CCDC50-201ENST00000392455 CYLC2Q14093 348 aaPredicted RBP15.67■□□□□ 0.1
CCDC50-201ENST00000392455 FGD2Q7Z6J4 655 aa15.67■□□□□ 0.1
CCDC50-201ENST00000392455 TEX2Q8IWB9 1127 aa15.67■□□□□ 0.1
CCDC50-201ENST00000392455 ZFP69BQ9UJL9 534 aa15.67■□□□□ 0.1
CCDC50-201ENST00000392455 HSPA13P48723 471 aa15.67■□□□□ 0.1
CCDC50-201ENST00000392455 CCDC142Q17RM4 750 aa15.67■□□□□ 0.1
CCDC50-201ENST00000392455 RCSD1Q6JBY9 416 aa15.67■□□□□ 0.1
CCDC50-201ENST00000392455 ERAP1Q9NZ08 941 aa15.67■□□□□ 0.1
CCDC50-201ENST00000392455 MYO5CQ9NQX4 1742 aa15.67■□□□□ 0.1
CCDC50-201ENST00000392455 CYP4A11Q02928 519 aa15.67■□□□□ 0.1
CCDC50-201ENST00000392455 CUL3Q13618 768 aa15.67■□□□□ 0.1
CCDC50-201ENST00000392455 MIS18BP1Q6P0N0 1132 aa15.67■□□□□ 0.1
CCDC50-201ENST00000392455 ZNF653Q96CK0 615 aa15.67■□□□□ 0.1
CCDC50-201ENST00000392455 CLIC6Q96NY7 704 aa15.67■□□□□ 0.1
CCDC50-201ENST00000392455 PSMD2Q13200 908 aa15.67■□□□□ 0.1
CCDC50-201ENST00000392455 DPP9Q86TI2 863 aa15.67■□□□□ 0.1
CCDC50-201ENST00000392455 DEPDC7Q96QD5 511 aa15.67■□□□□ 0.1
CCDC50-201ENST00000392455 PTH1RQ03431 593 aa15.67■□□□□ 0.1
CCDC50-201ENST00000392455 THOC7Q6I9Y2 204 aaKnown RBP15.67■□□□□ 0.1
CCDC50-201ENST00000392455 UHMK1Q8TAS1 419 aaKnown RBP15.67■□□□□ 0.1
CCDC50-201ENST00000392455 DYDC2Q96IM9 177 aa15.67■□□□□ 0.1
CCDC50-201ENST00000392455 TM6SF1Q9BZW5 370 aa15.67■□□□□ 0.1
CCDC50-201ENST00000392455 BCL2L12Q9HB09 334 aa15.67■□□□□ 0.1
CCDC50-201ENST00000392455 DDX56Q9NY93 547 aaKnown RBP15.67■□□□□ 0.1
CCDC50-201ENST00000392455 ATP7AQ04656 1500 aa15.67■□□□□ 0.1
CCDC50-201ENST00000392455 ANXA11P50995 505 aaKnown RBP15.66■□□□□ 0.1
CCDC50-201ENST00000392455 EHHADHQ08426 723 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms