RNA–Protein interactions for RNA: ENST00000376895.2

SSX3-203, Transcript of SSX family member 3, humanhuman

TSL 5

Gene SSX3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-203ENST00000376895 RHOBTB2Q9BYZ6 727 aa6.92□□□□□ -1.3
SSX3-203ENST00000376895 GOLGA6AQ9NYA3 693 aa6.92□□□□□ -1.3
SSX3-203ENST00000376895 TRPC5Q9UL62 973 aaPredicted RBP6.92□□□□□ -1.3
SSX3-203ENST00000376895 AFF2P51816 1311 aa6.92□□□□□ -1.3
SSX3-203ENST00000376895 CRB1P82279 1406 aa6.92□□□□□ -1.3
SSX3-203ENST00000376895 COL3A1P02461 1466 aaPredicted RBP6.92□□□□□ -1.3
SSX3-203ENST00000376895 CAMTA1Q9Y6Y1 1673 aa6.91□□□□□ -1.3
SSX3-203ENST00000376895 TCRBV5S4A2TA0A5A2 114 aa6.91□□□□□ -1.3
SSX3-203ENST00000376895 EXOC5O00471 708 aa6.91□□□□□ -1.3
SSX3-203ENST00000376895 MAN2B1O00754 1011 aa6.91□□□□□ -1.3
SSX3-203ENST00000376895 NKRFO15226 690 aaKnown RBP eCLIP6.91□□□□□ -1.3
SSX3-203ENST00000376895 HTATSF1O43719 755 aaKnown RBP6.91□□□□□ -1.3
SSX3-203ENST00000376895 RFPL1O75677 317 aa6.91□□□□□ -1.3
SSX3-203ENST00000376895 ZGLP1P0C6A0 271 aa6.91□□□□□ -1.3
SSX3-203ENST00000376895 ZBTB48P10074 688 aaPredicted RBP6.91□□□□□ -1.3
SSX3-203ENST00000376895 SLC9A1P19634 815 aa6.91□□□□□ -1.3
SSX3-203ENST00000376895 GRIK1P39086 918 aa6.91□□□□□ -1.3
SSX3-203ENST00000376895 TMPOP42166 694 aaKnown RBP6.91□□□□□ -1.3
SSX3-203ENST00000376895 RTP1P59025 263 aa6.91□□□□□ -1.3
SSX3-203ENST00000376895 CALD1Q05682 793 aaKnown RBP6.91□□□□□ -1.3
SSX3-203ENST00000376895 DOC2BQ14184 412 aa6.91□□□□□ -1.3
SSX3-203ENST00000376895 TERF2Q15554 542 aa6.91□□□□□ -1.3
SSX3-203ENST00000376895 HSF5Q4G112 596 aaPredicted RBP6.91□□□□□ -1.3
SSX3-203ENST00000376895 TMEM240Q5SV17 173 aa6.91□□□□□ -1.3
SSX3-203ENST00000376895 GPR158Q5T848 1215 aa6.91□□□□□ -1.3
SSX3-203ENST00000376895 CABP7Q86V35 215 aa6.91□□□□□ -1.3
SSX3-203ENST00000376895 C1orf162Q8NEQ5 155 aaPredicted RBP6.91□□□□□ -1.3
SSX3-203ENST00000376895 JPH3Q8WXH2 748 aaPredicted RBP6.91□□□□□ -1.3
SSX3-203ENST00000376895 ALPK1Q96QP1 1244 aa6.91□□□□□ -1.3
SSX3-203ENST00000376895 MTA3Q9BTC8 594 aa6.91□□□□□ -1.3
SSX3-203ENST00000376895 SLC6A20Q9NP91 592 aa6.91□□□□□ -1.3
SSX3-203ENST00000376895 TOMM22Q9NS69 142 aa6.91□□□□□ -1.3
SSX3-203ENST00000376895 LMCD1Q9NZU5 365 aa6.91□□□□□ -1.3
SSX3-203ENST00000376895 SLAMF8Q9P0V8 285 aa6.91□□□□□ -1.3
SSX3-203ENST00000376895 IMPACTQ9P2X3 320 aa6.91□□□□□ -1.3
SSX3-203ENST00000376895 STK17AQ9UEE5 414 aa6.91□□□□□ -1.3
SSX3-203ENST00000376895 IP6K2Q9UHH9 426 aa6.91□□□□□ -1.3
SSX3-203ENST00000376895 TMEM59LQ9UK28 342 aa6.91□□□□□ -1.3
SSX3-203ENST00000376895 DSEQ9UL01 958 aa6.91□□□□□ -1.3
SSX3-203ENST00000376895 RRP7AQ9Y3A4 280 aaKnown RBP6.91□□□□□ -1.3
SSX3-203ENST00000376895 KDRP35968 1356 aa6.91□□□□□ -1.3
SSX3-203ENST00000376895 COL5A2P05997 1499 aaPredicted RBP6.91□□□□□ -1.3
SSX3-203ENST00000376895 PHRF1Q9P1Y6 1649 aaKnown RBP6.9□□□□□ -1.3
SSX3-203ENST00000376895 SHPRHQ149N8 1683 aa6.9□□□□□ -1.3
SSX3-203ENST00000376895 MARF1Q9Y4F3 1742 aaKnown RBP6.9□□□□□ -1.3
SSX3-203ENST00000376895 SCDO00767 359 aa6.9□□□□□ -1.3
SSX3-203ENST00000376895 PLIN1O60240 522 aa6.9□□□□□ -1.3
SSX3-203ENST00000376895 CLASP2O75122 1294 aaKnown RBP6.9□□□□□ -1.3
SSX3-203ENST00000376895 CAND2O75155 1236 aa6.9□□□□□ -1.3
SSX3-203ENST00000376895 HSP90AB1P08238 724 aaKnown RBP6.9□□□□□ -1.3
SSX3-203ENST00000376895 ZSCAN20P17040 1043 aaPredicted RBP6.9□□□□□ -1.3
SSX3-203ENST00000376895 KRT85P78386 507 aa6.9□□□□□ -1.3
SSX3-203ENST00000376895 RASSF7Q02833 373 aa6.9□□□□□ -1.3
SSX3-203ENST00000376895 CHRNEQ04844 493 aa6.9□□□□□ -1.3
SSX3-203ENST00000376895 HLTFQ14527 1009 aaKnown RBP eCLIP6.9□□□□□ -1.3
SSX3-203ENST00000376895 MLC1Q15049 377 aa6.9□□□□□ -1.3
SSX3-203ENST00000376895 MSMPQ1L6U9 139 aa6.9□□□□□ -1.3
SSX3-203ENST00000376895 MTHFSDQ2M296 383 aaKnown RBP6.9□□□□□ -1.3
SSX3-203ENST00000376895 CXorf57Q6NSI4 855 aaKnown RBP6.9□□□□□ -1.3
SSX3-203ENST00000376895 CYP4F22Q6NT55 531 aa6.9□□□□□ -1.3
SSX3-203ENST00000376895 ZNF530Q6P9A1 599 aaPredicted RBP6.9□□□□□ -1.3
SSX3-203ENST00000376895 GALNT18Q6P9A2 607 aa6.9□□□□□ -1.3
SSX3-203ENST00000376895 PNMA8AQ86V59 439 aaPredicted RBP6.9□□□□□ -1.3
SSX3-203ENST00000376895 RASSF3Q86WH2 238 aa6.9□□□□□ -1.3
SSX3-203ENST00000376895 ZZZ3Q8IYH5 903 aa6.9□□□□□ -1.3
SSX3-203ENST00000376895 MAGEB6Q8N7X4 407 aa6.9□□□□□ -1.3
SSX3-203ENST00000376895 ZNF610Q8N9Z0 462 aa6.9□□□□□ -1.3
SSX3-203ENST00000376895 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.9□□□□□ -1.3
SSX3-203ENST00000376895 ELF4Q99607 663 aaPredicted RBP6.9□□□□□ -1.3
SSX3-203ENST00000376895 ACSS2Q9NR19 701 aa6.9□□□□□ -1.3
SSX3-203ENST00000376895 NOB1Q9ULX3 412 aaKnown RBP6.9□□□□□ -1.3
SSX3-203ENST00000376895 ZNF652Q9Y2D9 606 aa6.9□□□□□ -1.3
SSX3-203ENST00000376895 B3GALT1Q9Y5Z6 326 aa6.9□□□□□ -1.3
SSX3-203ENST00000376895 ATP23Q9Y6H3 246 aa6.9□□□□□ -1.3
SSX3-203ENST00000376895 SPATA31A1Q5TZJ5 1347 aa6.9□□□□□ -1.3
SSX3-203ENST00000376895 SPATA31A5Q5VU36 1347 aa6.9□□□□□ -1.3
SSX3-203ENST00000376895 SPATA31A7Q8IWB4 1347 aa6.9□□□□□ -1.3
SSX3-203ENST00000376895 PEAK1Q9H792 1746 aa6.9□□□□□ -1.31
SSX3-203ENST00000376895 COL14A1Q05707 1796 aaKnown RBP6.9□□□□□ -1.31
SSX3-203ENST00000376895 DYRK3O43781 588 aa6.89□□□□□ -1.31
SSX3-203ENST00000376895 RECQLP46063 649 aaPredicted RBP6.89□□□□□ -1.31
SSX3-203ENST00000376895 KCNMA1Q12791 1236 aa6.89□□□□□ -1.31
SSX3-203ENST00000376895 SLC14A2Q15849 920 aa6.89□□□□□ -1.31
SSX3-203ENST00000376895 EMC4Q5J8M3 183 aa6.89□□□□□ -1.31
SSX3-203ENST00000376895 CPZQ66K79 652 aa6.89□□□□□ -1.31
SSX3-203ENST00000376895 FSTL4Q6MZW2 842 aa6.89□□□□□ -1.31
SSX3-203ENST00000376895 C14orf80Q86SX3 495 aa6.89□□□□□ -1.31
SSX3-203ENST00000376895 WDR63Q8IWG1 891 aa6.89□□□□□ -1.31
SSX3-203ENST00000376895 AMOTL1Q8IY63 956 aa6.89□□□□□ -1.31
SSX3-203ENST00000376895 IFNL2Q8IZJ0 200 aa6.89□□□□□ -1.31
SSX3-203ENST00000376895 SH3RF2Q8TEC5 729 aa6.89□□□□□ -1.31
SSX3-203ENST00000376895 PSMD1Q99460 953 aa6.89□□□□□ -1.31
SSX3-203ENST00000376895 CD244Q9BZW8 370 aa6.89□□□□□ -1.31
SSX3-203ENST00000376895 PDLIM7Q9NR12 457 aa6.89□□□□□ -1.31
SSX3-203ENST00000376895 KCNH7Q9NS40 1196 aa6.89□□□□□ -1.31
SSX3-203ENST00000376895 BSDC1Q9NW68 430 aaPredicted RBP6.89□□□□□ -1.31
SSX3-203ENST00000376895 MKS1Q9NXB0 559 aa6.89□□□□□ -1.31
SSX3-203ENST00000376895 NOC2LQ9Y3T9 749 aaKnown RBP6.89□□□□□ -1.31
SSX3-203ENST00000376895 MRFAP1Q9Y605 127 aa6.89□□□□□ -1.31
SSX3-203ENST00000376895 SLIT2O94813 1529 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms