RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 DRP2Q13474 957 aa12.11□□□□□ -0.47
BRCC3-204ENST00000369462 EXOC8Q8IYI6 725 aa12.11□□□□□ -0.47
BRCC3-204ENST00000369462 C7orf31Q8N865 590 aa12.11□□□□□ -0.47
BRCC3-204ENST00000369462 MLKLQ8NB16 471 aa12.11□□□□□ -0.47
BRCC3-204ENST00000369462 KIAA0895Q8NCT3 520 aa12.11□□□□□ -0.47
BRCC3-204ENST00000369462 LMBR1Q8WVP7 490 aa12.11□□□□□ -0.47
BRCC3-204ENST00000369462 VTI1AQ96AJ9 217 aa12.11□□□□□ -0.47
BRCC3-204ENST00000369462 FGFBP2Q9BYJ0 223 aa12.11□□□□□ -0.47
BRCC3-204ENST00000369462 POLR3FQ9H1D9 316 aaPredicted RBP12.11□□□□□ -0.47
BRCC3-204ENST00000369462 MRPL44Q9H9J2 332 aaKnown RBP12.11□□□□□ -0.47
BRCC3-204ENST00000369462 NRCAMQ92823 1304 aa12.11□□□□□ -0.47
BRCC3-204ENST00000369462 IGKV6-21A0A0C4DH24 114 aa12.1□□□□□ -0.47
BRCC3-204ENST00000369462 CD44P16070 742 aaKnown RBP12.1□□□□□ -0.47
BRCC3-204ENST00000369462 PRCPP42785 496 aa12.1□□□□□ -0.47
BRCC3-204ENST00000369462 ACLYP53396 1101 aa12.1□□□□□ -0.47
BRCC3-204ENST00000369462 PEX3P56589 373 aa12.1□□□□□ -0.47
BRCC3-204ENST00000369462 NBPF20Q3BBV1 942 aa12.1□□□□□ -0.47
BRCC3-204ENST00000369462 MARCH8Q5T0T0 291 aa12.1□□□□□ -0.47
BRCC3-204ENST00000369462 EFCAB12Q6NXP0 572 aa12.1□□□□□ -0.47
BRCC3-204ENST00000369462 FAM178BQ8IXR5 827 aa12.1□□□□□ -0.47
BRCC3-204ENST00000369462 ZNF333Q96JL9 665 aa12.1□□□□□ -0.47
BRCC3-204ENST00000369462 JPH2Q9BR39 696 aaPredicted RBP12.1□□□□□ -0.47
BRCC3-204ENST00000369462 HDAC6Q9UBN7 1215 aa12.1□□□□□ -0.47
BRCC3-204ENST00000369462 SEL1LQ9UBV2 794 aa12.1□□□□□ -0.47
BRCC3-204ENST00000369462 PCDHA2Q9Y5H9 948 aa12.1□□□□□ -0.47
BRCC3-204ENST00000369462 COL1A2P08123 1366 aa12.1□□□□□ -0.47
BRCC3-204ENST00000369462 RRN3P2A6NIE6 340 aa12.1□□□□□ -0.47
BRCC3-204ENST00000369462 PLS3P13797 630 aa12.1□□□□□ -0.47
BRCC3-204ENST00000369462 CLCN3P51790 818 aa12.1□□□□□ -0.47
BRCC3-204ENST00000369462 MKRN4PQ13434 485 aaPredicted RBP12.1□□□□□ -0.47
BRCC3-204ENST00000369462 KLHL10Q6JEL2 608 aa12.1□□□□□ -0.47
BRCC3-204ENST00000369462 RETREG2Q8NC44 543 aa12.1□□□□□ -0.47
BRCC3-204ENST00000369462 OLFML3Q9NRN5 406 aa12.1□□□□□ -0.47
BRCC3-204ENST00000369462 ARID2Q68CP9 1835 aa12.1□□□□□ -0.47
BRCC3-204ENST00000369462 KAT6AQ92794 2004 aa12.1□□□□□ -0.47
BRCC3-204ENST00000369462 CCDC169A6NNP5 214 aa12.1□□□□□ -0.47
BRCC3-204ENST00000369462 PPP1R3GB7ZBB8 358 aa12.1□□□□□ -0.47
BRCC3-204ENST00000369462 MAGEB2O15479 319 aa12.1□□□□□ -0.47
BRCC3-204ENST00000369462 NMT1P30419 496 aaKnown RBP12.1□□□□□ -0.47
BRCC3-204ENST00000369462 ZNF165P49910 485 aa12.1□□□□□ -0.47
BRCC3-204ENST00000369462 CASP5P51878 434 aa12.1□□□□□ -0.47
BRCC3-204ENST00000369462 MTHFD1LQ6UB35 978 aa12.1□□□□□ -0.47
BRCC3-204ENST00000369462 RNF214Q8ND24 703 aa12.1□□□□□ -0.47
BRCC3-204ENST00000369462 PRPF31Q8WWY3 499 aaKnown RBP12.1□□□□□ -0.47
BRCC3-204ENST00000369462 BSNDQ8WZ55 320 aa12.1□□□□□ -0.47
BRCC3-204ENST00000369462 KIAA0100Q14667 2235 aaKnown RBP12.09□□□□□ -0.47
BRCC3-204ENST00000369462 MOXD2PA6NHM9 499 aa12.09□□□□□ -0.47
BRCC3-204ENST00000369462 GAS2O43903 313 aaKnown RBP12.09□□□□□ -0.47
BRCC3-204ENST00000369462 ARL2P36404 184 aa12.09□□□□□ -0.47
BRCC3-204ENST00000369462 DNM2P50570 870 aa12.09□□□□□ -0.47
BRCC3-204ENST00000369462 ZNF200P98182 395 aaPredicted RBP12.09□□□□□ -0.47
BRCC3-204ENST00000369462 DMP1Q13316 513 aaPredicted RBP12.09□□□□□ -0.47
BRCC3-204ENST00000369462 HIC1Q14526 733 aa12.09□□□□□ -0.47
BRCC3-204ENST00000369462 FAM47CQ5HY64 1035 aa12.09□□□□□ -0.47
BRCC3-204ENST00000369462 IER5Q5VY09 327 aa12.09□□□□□ -0.47
BRCC3-204ENST00000369462 NFRKBQ6P4R8 1299 aa12.09□□□□□ -0.47
BRCC3-204ENST00000369462 ARMC5Q96C12 935 aa12.09□□□□□ -0.47
BRCC3-204ENST00000369462 IFT74Q96LB3 600 aa12.09□□□□□ -0.47
BRCC3-204ENST00000369462 GLT1D1Q96MS3 346 aa12.09□□□□□ -0.47
BRCC3-204ENST00000369462 FIZ1Q96SL8 496 aa12.09□□□□□ -0.47
BRCC3-204ENST00000369462 TSEN34Q9BSV6 310 aaKnown RBP12.09□□□□□ -0.47
BRCC3-204ENST00000369462 GTPBP4Q9BZE4 634 aaKnown RBP12.09□□□□□ -0.47
BRCC3-204ENST00000369462 NAT10Q9H0A0 1025 aaKnown RBP12.09□□□□□ -0.47
BRCC3-204ENST00000369462 C17orf75Q9HAS0 396 aa12.09□□□□□ -0.47
BRCC3-204ENST00000369462 KBTBD13C9JR72 458 aa12.09□□□□□ -0.47
BRCC3-204ENST00000369462 GCNT3O95395 438 aa12.09□□□□□ -0.47
BRCC3-204ENST00000369462 GJB1P08034 283 aa12.09□□□□□ -0.47
BRCC3-204ENST00000369462 NPTX2P47972 431 aa12.09□□□□□ -0.47
BRCC3-204ENST00000369462 ZNF720Q7Z2F6 126 aa12.09□□□□□ -0.47
BRCC3-204ENST00000369462 ADSSL1Q8N142 457 aa12.09□□□□□ -0.47
BRCC3-204ENST00000369462 ASAP3Q8TDY4 903 aa12.09□□□□□ -0.47
BRCC3-204ENST00000369462 TCP11Q8WWU5 503 aa12.09□□□□□ -0.47
BRCC3-204ENST00000369462 PSPC1Q8WXF1 523 aaKnown RBP12.09□□□□□ -0.47
BRCC3-204ENST00000369462 SUCLA2Q9P2R7 463 aaPredicted RBP12.09□□□□□ -0.47
BRCC3-204ENST00000369462 DACH1Q9UI36 760 aa12.09□□□□□ -0.47
BRCC3-204ENST00000369462 SCN10AQ9Y5Y9 1956 aa12.08□□□□□ -0.48
BRCC3-204ENST00000369462 GRIN2DO15399 1336 aa12.08□□□□□ -0.48
BRCC3-204ENST00000369462 C17orf102A2RUQ5 167 aa12.08□□□□□ -0.48
BRCC3-204ENST00000369462 SLC16A4O15374 487 aa12.08□□□□□ -0.48
BRCC3-204ENST00000369462 CABYRO75952 493 aa12.08□□□□□ -0.48
BRCC3-204ENST00000369462 MYBP10242 640 aa12.08□□□□□ -0.48
BRCC3-204ENST00000369462 GLRA2P23416 452 aa12.08□□□□□ -0.48
BRCC3-204ENST00000369462 TMOD1P28289 359 aa12.08□□□□□ -0.48
BRCC3-204ENST00000369462 SMTNP53814 917 aa12.08□□□□□ -0.48
BRCC3-204ENST00000369462 RTP1P59025 263 aa12.08□□□□□ -0.48
BRCC3-204ENST00000369462 STIM1Q13586 685 aa12.08□□□□□ -0.48
BRCC3-204ENST00000369462 ZC2HC1CQ53FD0 456 aaPredicted RBP12.08□□□□□ -0.48
BRCC3-204ENST00000369462 L1TD1Q5T7N2 865 aaKnown RBP12.08□□□□□ -0.48
BRCC3-204ENST00000369462 RHPN2Q8IUC4 686 aa12.08□□□□□ -0.48
BRCC3-204ENST00000369462 KSR1Q8IVT5 923 aa12.08□□□□□ -0.48
BRCC3-204ENST00000369462 ARID3AQ99856 593 aa12.08□□□□□ -0.48
BRCC3-204ENST00000369462 KIFC3Q9BVG8 833 aa12.08□□□□□ -0.48
BRCC3-204ENST00000369462 MBLAC1A4D2B0 266 aaPredicted RBP12.08□□□□□ -0.48
BRCC3-204ENST00000369462 K7ENM7 598 aa12.08□□□□□ -0.48
BRCC3-204ENST00000369462 TREHO43280 583 aa12.08□□□□□ -0.48
BRCC3-204ENST00000369462 GNAT1P11488 350 aa12.08□□□□□ -0.48
BRCC3-204ENST00000369462 ADAM17P78536 824 aa12.08□□□□□ -0.48
BRCC3-204ENST00000369462 MYOCDQ8IZQ8 938 aa12.08□□□□□ -0.48
BRCC3-204ENST00000369462 U2AF1L4Q8WU68 220 aaKnown RBP12.08□□□□□ -0.48
BRCC3-204ENST00000369462 SCFD1Q8WVM8 642 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms