RNA–Protein interactions for RNA: ENST00000354679.3

HCFC1R1-202, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2 BASIC

Gene HCFC1R1, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-202ENST00000354679 C17orf80Q9BSJ5 609 aa22.61■■□□□ 1.21
HCFC1R1-202ENST00000354679 RC3H2Q9HBD1 1191 aaKnown RBP22.61■■□□□ 1.21
HCFC1R1-202ENST00000354679 H3BQV1 296 aa22.6■■□□□ 1.21
HCFC1R1-202ENST00000354679 GTPBP6O43824 516 aaPredicted RBP22.6■■□□□ 1.21
HCFC1R1-202ENST00000354679 STAG3L1P0CL83 205 aa22.6■■□□□ 1.21
HCFC1R1-202ENST00000354679 DARSP14868 501 aaKnown RBP22.6■■□□□ 1.21
HCFC1R1-202ENST00000354679 GRB10Q13322 594 aa22.6■■□□□ 1.21
HCFC1R1-202ENST00000354679 RHPN2Q8IUC4 686 aa22.6■■□□□ 1.21
HCFC1R1-202ENST00000354679 CRIPAKQ8N1N5 446 aa22.6■■□□□ 1.21
HCFC1R1-202ENST00000354679 GDPD5Q8WTR4 605 aa22.6■■□□□ 1.21
HCFC1R1-202ENST00000354679 PPM1EQ8WY54 764 aa22.6■■□□□ 1.21
HCFC1R1-202ENST00000354679 DHX33Q9H6R0 707 aaKnown RBP22.6■■□□□ 1.21
HCFC1R1-202ENST00000354679 RGS18Q9NS28 235 aa22.6■■□□□ 1.21
HCFC1R1-202ENST00000354679 C1orf112Q9NSG2 853 aa22.6■■□□□ 1.21
HCFC1R1-202ENST00000354679 ADGRA3Q8IWK6 1321 aa22.59■■□□□ 1.21
HCFC1R1-202ENST00000354679 COL4A4P53420 1690 aaPredicted RBP22.59■■□□□ 1.21
HCFC1R1-202ENST00000354679 LPXNO60711 386 aa22.59■■□□□ 1.21
HCFC1R1-202ENST00000354679 DGKIO75912 1065 aa22.59■■□□□ 1.21
HCFC1R1-202ENST00000354679 POU3F3P20264 500 aaPredicted RBP22.59■■□□□ 1.21
HCFC1R1-202ENST00000354679 IBSPP21815 317 aaPredicted RBP22.59■■□□□ 1.21
HCFC1R1-202ENST00000354679 TECP42680 631 aa22.59■■□□□ 1.21
HCFC1R1-202ENST00000354679 SARSP49591 514 aaKnown RBP22.59■■□□□ 1.21
HCFC1R1-202ENST00000354679 TOB1P50616 345 aaPredicted RBP22.59■■□□□ 1.21
HCFC1R1-202ENST00000354679 ZNF410Q86VK4 478 aa22.59■■□□□ 1.21
HCFC1R1-202ENST00000354679 FIBCD1Q8N539 461 aa22.59■■□□□ 1.21
HCFC1R1-202ENST00000354679 FBXO22Q8NEZ5 403 aa22.59■■□□□ 1.21
HCFC1R1-202ENST00000354679 ZNF689Q96CS4 500 aaPredicted RBP22.59■■□□□ 1.21
HCFC1R1-202ENST00000354679 SAMD11Q96NU1 681 aa22.59■■□□□ 1.21
HCFC1R1-202ENST00000354679 GCOM2Q9BZD3 368 aaPredicted RBP22.59■■□□□ 1.21
HCFC1R1-202ENST00000354679 BMP2KQ9NSY1 1161 aaPredicted RBP22.59■■□□□ 1.21
HCFC1R1-202ENST00000354679 LRFN2Q9ULH4 789 aa22.59■■□□□ 1.21
HCFC1R1-202ENST00000354679 MTCH2Q9Y6C9 303 aa22.59■■□□□ 1.21
HCFC1R1-202ENST00000354679 A0A087WZ62 844 aa22.58■■□□□ 1.21
HCFC1R1-202ENST00000354679 DSC3Q14574 896 aa22.58■■□□□ 1.21
HCFC1R1-202ENST00000354679 EMC2Q15006 297 aa22.58■■□□□ 1.21
HCFC1R1-202ENST00000354679 CCDC85BQ15834 202 aaPredicted RBP22.58■■□□□ 1.21
HCFC1R1-202ENST00000354679 SLC24A5Q71RS6 500 aa22.58■■□□□ 1.21
HCFC1R1-202ENST00000354679 MICALL1Q8N3F8 863 aa22.58■■□□□ 1.21
HCFC1R1-202ENST00000354679 C4orf32Q8N8J7 132 aa22.58■■□□□ 1.21
HCFC1R1-202ENST00000354679 FDXACB1Q9BRP7 624 aaPredicted RBP22.58■■□□□ 1.21
HCFC1R1-202ENST00000354679 ANKEF1Q9NU02 776 aa22.58■■□□□ 1.21
HCFC1R1-202ENST00000354679 PCDHB6Q9Y5E3 794 aa22.58■■□□□ 1.21
HCFC1R1-202ENST00000354679 PRRC2BQ5JSZ5 2229 aaKnown RBP22.58■■□□□ 1.2
HCFC1R1-202ENST00000354679 C9IYK1 514 aa22.57■■□□□ 1.2
HCFC1R1-202ENST00000354679 GAS2O43903 313 aaKnown RBP22.57■■□□□ 1.2
HCFC1R1-202ENST00000354679 FGFR4P22455 802 aa22.57■■□□□ 1.2
HCFC1R1-202ENST00000354679 CUL4AQ13619 759 aa22.57■■□□□ 1.2
HCFC1R1-202ENST00000354679 BTG3Q14201 252 aaPredicted RBP22.57■■□□□ 1.2
HCFC1R1-202ENST00000354679 EPC2Q52LR7 807 aa22.57■■□□□ 1.2
HCFC1R1-202ENST00000354679 KSR1Q8IVT5 923 aa22.57■■□□□ 1.2
HCFC1R1-202ENST00000354679 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.57■■□□□ 1.2
HCFC1R1-202ENST00000354679 TMEM192Q8IY95 271 aa22.57■■□□□ 1.2
HCFC1R1-202ENST00000354679 ERMNQ8TAM6 284 aa22.57■■□□□ 1.2
HCFC1R1-202ENST00000354679 TMEM143Q96AN5 459 aa22.57■■□□□ 1.2
HCFC1R1-202ENST00000354679 CCDC43Q96MW1 224 aaKnown RBP22.57■■□□□ 1.2
HCFC1R1-202ENST00000354679 TUFT1Q9NNX1 390 aa22.57■■□□□ 1.2
HCFC1R1-202ENST00000354679 RNF216Q9NWF9 866 aaPredicted RBP22.57■■□□□ 1.2
HCFC1R1-202ENST00000354679 COL4A3BPQ9Y5P4 624 aa22.57■■□□□ 1.2
HCFC1R1-202ENST00000354679 ARID2Q68CP9 1835 aa22.57■■□□□ 1.2
HCFC1R1-202ENST00000354679 CSDE1O75534 798 aaKnown RBP22.56■■□□□ 1.2
HCFC1R1-202ENST00000354679 SPATA31C1P0DKV0 1188 aa22.56■■□□□ 1.2
HCFC1R1-202ENST00000354679 ZSCAN20P17040 1043 aaPredicted RBP22.56■■□□□ 1.2
HCFC1R1-202ENST00000354679 PTGDRQ13258 359 aa22.56■■□□□ 1.2
HCFC1R1-202ENST00000354679 LARP1BQ659C4 914 aaKnown RBP22.56■■□□□ 1.2
HCFC1R1-202ENST00000354679 CATSPER3Q86XQ3 398 aa22.56■■□□□ 1.2
HCFC1R1-202ENST00000354679 TCP11Q8WWU5 503 aa22.56■■□□□ 1.2
HCFC1R1-202ENST00000354679 PSPC1Q8WXF1 523 aaKnown RBP22.56■■□□□ 1.2
HCFC1R1-202ENST00000354679 NLRP4Q96MN2 994 aa22.56■■□□□ 1.2
HCFC1R1-202ENST00000354679 MTRQ99707 1265 aa22.56■■□□□ 1.2
HCFC1R1-202ENST00000354679 POLR3CQ9BUI4 534 aaPredicted RBP22.56■■□□□ 1.2
HCFC1R1-202ENST00000354679 INO80BQ9C086 356 aaPredicted RBP22.56■■□□□ 1.2
HCFC1R1-202ENST00000354679 PCDHB7Q9Y5E2 793 aa22.56■■□□□ 1.2
HCFC1R1-202ENST00000354679 REV3LO60673 3130 aa22.55■■□□□ 1.2
HCFC1R1-202ENST00000354679 MED24O75448 989 aa22.55■■□□□ 1.2
HCFC1R1-202ENST00000354679 SFPQP23246 707 aaKnown RBP eCLIP22.55■■□□□ 1.2
HCFC1R1-202ENST00000354679 FXR2P51116 673 aaKnown RBP eCLIP22.55■■□□□ 1.2
HCFC1R1-202ENST00000354679 RILPL1Q5EBL4 403 aa22.55■■□□□ 1.2
HCFC1R1-202ENST00000354679 CMTR2Q8IYT2 770 aaKnown RBP22.55■■□□□ 1.2
HCFC1R1-202ENST00000354679 PIGOQ8TEQ8 1089 aa22.55■■□□□ 1.2
HCFC1R1-202ENST00000354679 PRPF31Q8WWY3 499 aaKnown RBP22.55■■□□□ 1.2
HCFC1R1-202ENST00000354679 XPNPEP1Q9NQW7 623 aa22.55■■□□□ 1.2
HCFC1R1-202ENST00000354679 LMCD1Q9NZU5 365 aa22.55■■□□□ 1.2
HCFC1R1-202ENST00000354679 A0A087WWV3 80 aa22.54■■□□□ 1.2
HCFC1R1-202ENST00000354679 DGAT1O75907 488 aa22.54■■□□□ 1.2
HCFC1R1-202ENST00000354679 LINC00271P0C7V0 271 aa22.54■■□□□ 1.2
HCFC1R1-202ENST00000354679 XRCC6P12956 609 aaKnown RBP eCLIP22.54■■□□□ 1.2
HCFC1R1-202ENST00000354679 CTNNB1P35222 781 aa22.54■■□□□ 1.2
HCFC1R1-202ENST00000354679 RARRES1P49788 294 aa22.54■■□□□ 1.2
HCFC1R1-202ENST00000354679 GATMP50440 423 aa22.54■■□□□ 1.2
HCFC1R1-202ENST00000354679 FAM189BP81408 668 aa22.54■■□□□ 1.2
HCFC1R1-202ENST00000354679 LAMTOR4Q0VGL1 99 aa22.54■■□□□ 1.2
HCFC1R1-202ENST00000354679 PAN2Q504Q3 1202 aaKnown RBP22.54■■□□□ 1.2
HCFC1R1-202ENST00000354679 HAUS3Q68CZ6 603 aa22.54■■□□□ 1.2
HCFC1R1-202ENST00000354679 CLP1Q92989 425 aaKnown RBP22.54■■□□□ 1.2
HCFC1R1-202ENST00000354679 ATP6V0A4Q9HBG4 840 aa22.54■■□□□ 1.2
HCFC1R1-202ENST00000354679 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.54■■□□□ 1.2
HCFC1R1-202ENST00000354679 TMEM161AQ9NX61 479 aa22.54■■□□□ 1.2
HCFC1R1-202ENST00000354679 RWDD3Q9Y3V2 267 aa22.54■■□□□ 1.2
HCFC1R1-202ENST00000354679 NLRC5Q86WI3 1866 aa22.54■■□□□ 1.2
HCFC1R1-202ENST00000354679 LAD1O00515 517 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms