RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 PCDHB12Q9Y5F1 795 aa20.48■□□□□ 0.87
TMEM88-201ENST00000301599 TBKBP1A7MCY6 615 aa20.47■□□□□ 0.87
TMEM88-201ENST00000301599 LARGE1O95461 756 aa20.47■□□□□ 0.87
TMEM88-201ENST00000301599 MMP1P03956 469 aa20.47■□□□□ 0.87
TMEM88-201ENST00000301599 TRIM29Q14134 588 aa20.47■□□□□ 0.87
TMEM88-201ENST00000301599 EPHA7Q15375 998 aa20.47■□□□□ 0.87
TMEM88-201ENST00000301599 SPOUT1Q5T280 376 aaKnown RBP20.47■□□□□ 0.87
TMEM88-201ENST00000301599 EP400NLQ6ZTU2 488 aa20.47■□□□□ 0.87
TMEM88-201ENST00000301599 EXOC8Q8IYI6 725 aa20.47■□□□□ 0.87
TMEM88-201ENST00000301599 SLFN12Q8IYM2 578 aa20.47■□□□□ 0.87
TMEM88-201ENST00000301599 KLHL23Q8NBE8 558 aa20.47■□□□□ 0.87
TMEM88-201ENST00000301599 NSUN7Q8NE18 718 aaKnown RBP20.47■□□□□ 0.87
TMEM88-201ENST00000301599 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.47■□□□□ 0.87
TMEM88-201ENST00000301599 SPPL3Q8TCT6 385 aa20.47■□□□□ 0.87
TMEM88-201ENST00000301599 NEK9Q8TD19 979 aa20.47■□□□□ 0.87
TMEM88-201ENST00000301599 HAS1Q92839 578 aa20.47■□□□□ 0.87
TMEM88-201ENST00000301599 ZNF668Q96K58 619 aaPredicted RBP20.47■□□□□ 0.87
TMEM88-201ENST00000301599 GCOM2Q9BZD3 368 aaPredicted RBP20.47■□□□□ 0.87
TMEM88-201ENST00000301599 RALGAPA2Q2PPJ7 1873 aa20.47■□□□□ 0.87
TMEM88-201ENST00000301599 NCOR1O75376 2440 aa20.46■□□□□ 0.87
TMEM88-201ENST00000301599 XIRP2A4UGR9 3374 aa20.46■□□□□ 0.87
TMEM88-201ENST00000301599 TMEM150BA6NC51 233 aa20.46■□□□□ 0.87
TMEM88-201ENST00000301599 HOXA2O43364 376 aa20.46■□□□□ 0.87
TMEM88-201ENST00000301599 ITGB1P05556 798 aa20.46■□□□□ 0.87
TMEM88-201ENST00000301599 NR5A1Q13285 461 aa20.46■□□□□ 0.87
TMEM88-201ENST00000301599 COL19A1Q14993 1142 aa20.46■□□□□ 0.87
TMEM88-201ENST00000301599 EARS2Q5JPH6 523 aaKnown RBP20.46■□□□□ 0.87
TMEM88-201ENST00000301599 ANO5Q75V66 913 aa20.46■□□□□ 0.87
TMEM88-201ENST00000301599 SH2D3AQ9BRG2 576 aa20.46■□□□□ 0.87
TMEM88-201ENST00000301599 INO80BQ9C086 356 aaPredicted RBP20.46■□□□□ 0.87
TMEM88-201ENST00000301599 SUCLA2Q9P2R7 463 aaPredicted RBP20.46■□□□□ 0.87
TMEM88-201ENST00000301599 NLRC5Q86WI3 1866 aa20.45■□□□□ 0.86
TMEM88-201ENST00000301599 DRP2Q13474 957 aa20.45■□□□□ 0.86
TMEM88-201ENST00000301599 OTUD6AQ7L8S5 288 aa20.45■□□□□ 0.86
TMEM88-201ENST00000301599 TNFRSF25Q93038 417 aa20.45■□□□□ 0.86
TMEM88-201ENST00000301599 PPP2R3CQ969Q6 453 aa20.45■□□□□ 0.86
TMEM88-201ENST00000301599 CYP26B1Q9NR63 512 aa20.45■□□□□ 0.86
TMEM88-201ENST00000301599 CHST12Q9NRB3 414 aa20.45■□□□□ 0.86
TMEM88-201ENST00000301599 TYW1Q9NV66 732 aaKnown RBP20.45■□□□□ 0.86
TMEM88-201ENST00000301599 CLDND1Q9NY35 253 aa20.45■□□□□ 0.86
TMEM88-201ENST00000301599 LIMCH1Q9UPQ0 1083 aa20.45■□□□□ 0.86
TMEM88-201ENST00000301599 PPME1Q9Y570 386 aa20.45■□□□□ 0.86
TMEM88-201ENST00000301599 GRXCR2A6NFK2 248 aa20.44■□□□□ 0.86
TMEM88-201ENST00000301599 BTBD18B2RXH4 712 aa20.44■□□□□ 0.86
TMEM88-201ENST00000301599 EOMESO95936 686 aa20.44■□□□□ 0.86
TMEM88-201ENST00000301599 CAMK1Q14012 370 aa20.44■□□□□ 0.86
TMEM88-201ENST00000301599 CSPP1Q1MSJ5 1256 aa20.44■□□□□ 0.86
TMEM88-201ENST00000301599 PTCRAQ6ISU1 281 aaPredicted RBP20.44■□□□□ 0.86
TMEM88-201ENST00000301599 ZNF410Q86VK4 478 aa20.44■□□□□ 0.86
TMEM88-201ENST00000301599 POTEDQ86YR6 584 aa20.44■□□□□ 0.86
TMEM88-201ENST00000301599 C4orf19Q8IY42 314 aa20.44■□□□□ 0.86
TMEM88-201ENST00000301599 POF1BQ8WVV4 589 aa20.44■□□□□ 0.86
TMEM88-201ENST00000301599 TMEM117Q9H0C3 514 aa20.44■□□□□ 0.86
TMEM88-201ENST00000301599 DACT1Q9NYF0 836 aa20.44■□□□□ 0.86
TMEM88-201ENST00000301599 WDR81Q562E7 1941 aa20.44■□□□□ 0.86
TMEM88-201ENST00000301599 BRWD1Q9NSI6 2320 aa20.43■□□□□ 0.86
TMEM88-201ENST00000301599 A0A087WZ62 844 aa20.43■□□□□ 0.86
TMEM88-201ENST00000301599 A0A0U1RQF3 1178 aa20.43■□□□□ 0.86
TMEM88-201ENST00000301599 FAM205CA6NFA0 338 aa20.43■□□□□ 0.86
TMEM88-201ENST00000301599 H3BQ06 376 aaPredicted RBP20.43■□□□□ 0.86
TMEM88-201ENST00000301599 JAK2O60674 1132 aa20.43■□□□□ 0.86
TMEM88-201ENST00000301599 FGFR1P11362 822 aa20.43■□□□□ 0.86
TMEM88-201ENST00000301599 DNAJB1P25685 340 aa20.43■□□□□ 0.86
TMEM88-201ENST00000301599 NPEPPSP55786 919 aa20.43■□□□□ 0.86
TMEM88-201ENST00000301599 UBE3AQ05086 875 aa20.43■□□□□ 0.86
TMEM88-201ENST00000301599 HYAL1Q12794 435 aa20.43■□□□□ 0.86
TMEM88-201ENST00000301599 CTC1Q2NKJ3 1217 aa20.43■□□□□ 0.86
TMEM88-201ENST00000301599 NCAPH2Q6IBW4 605 aa20.43■□□□□ 0.86
TMEM88-201ENST00000301599 ECHDC2Q86YB7 292 aa20.43■□□□□ 0.86
TMEM88-201ENST00000301599 RHPN2Q8IUC4 686 aa20.43■□□□□ 0.86
TMEM88-201ENST00000301599 DIS3L2Q8IYB7 885 aaKnown RBP20.43■□□□□ 0.86
TMEM88-201ENST00000301599 SLC7A3Q8WY07 619 aa20.43■□□□□ 0.86
TMEM88-201ENST00000301599 CEP170P1Q96L14 293 aa20.43■□□□□ 0.86
TMEM88-201ENST00000301599 FDXACB1Q9BRP7 624 aaPredicted RBP20.43■□□□□ 0.86
TMEM88-201ENST00000301599 IGFLR1Q9H665 355 aa20.43■□□□□ 0.86
TMEM88-201ENST00000301599 ZSWIM4Q9H7M6 989 aa20.43■□□□□ 0.86
TMEM88-201ENST00000301599 PCDHA12Q9UN75 941 aa20.43■□□□□ 0.86
TMEM88-201ENST00000301599 FAM50BQ9Y247 325 aa20.43■□□□□ 0.86
TMEM88-201ENST00000301599 BDP1A6H8Y1 2624 aa20.42■□□□□ 0.86
TMEM88-201ENST00000301599 CSDE1O75534 798 aaKnown RBP20.42■□□□□ 0.86
TMEM88-201ENST00000301599 FGFR4P22455 802 aa20.42■□□□□ 0.86
TMEM88-201ENST00000301599 SFPQP23246 707 aaKnown RBP eCLIP20.42■□□□□ 0.86
TMEM88-201ENST00000301599 PLA2G4FQ68DD2 849 aa20.42■□□□□ 0.86
TMEM88-201ENST00000301599 FAM178BQ8IXR5 827 aa20.42■□□□□ 0.86
TMEM88-201ENST00000301599 ABI1Q8IZP0 508 aa20.42■□□□□ 0.86
TMEM88-201ENST00000301599 MICAL1Q8TDZ2 1067 aa20.42■□□□□ 0.86
TMEM88-201ENST00000301599 CASD1Q96PB1 797 aa20.42■□□□□ 0.86
TMEM88-201ENST00000301599 RGL1Q9NZL6 768 aa20.42■□□□□ 0.86
TMEM88-201ENST00000301599 MYO7AQ13402 2215 aa20.42■□□□□ 0.86
TMEM88-201ENST00000301599 LAG3P18627 525 aa20.41■□□□□ 0.86
TMEM88-201ENST00000301599 YWHABP31946 246 aaKnown RBP20.41■□□□□ 0.86
TMEM88-201ENST00000301599 LTBRP36941 435 aa20.41■□□□□ 0.86
TMEM88-201ENST00000301599 RFC5P40937 340 aa20.41■□□□□ 0.86
TMEM88-201ENST00000301599 POLGP54098 1239 aaPredicted RBP20.41■□□□□ 0.86
TMEM88-201ENST00000301599 SPIRE1Q08AE8 756 aa20.41■□□□□ 0.86
TMEM88-201ENST00000301599 ADAM15Q13444 863 aa20.41■□□□□ 0.86
TMEM88-201ENST00000301599 SAFBQ15424 915 aaKnown RBP eCLIP20.41■□□□□ 0.86
TMEM88-201ENST00000301599 CALCRLQ16602 461 aa20.41■□□□□ 0.86
TMEM88-201ENST00000301599 THNSL1Q8IYQ7 743 aa20.41■□□□□ 0.86
TMEM88-201ENST00000301599 COLGALT1Q8NBJ5 622 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms