RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 NIPA1Q7RTP0 329 aa27.32■■□□□ 1.96
ROM1-201ENST00000278833 CD302Q8IX05 232 aa27.32■■□□□ 1.96
ROM1-201ENST00000278833 SYCE1Q8N0S2 351 aa27.32■■□□□ 1.96
ROM1-201ENST00000278833 SLC30A5Q8TAD4 765 aa27.32■■□□□ 1.96
ROM1-201ENST00000278833 ACER1Q8TDN7 264 aa27.32■■□□□ 1.96
ROM1-201ENST00000278833 GMLQ99445 158 aa27.32■■□□□ 1.96
ROM1-201ENST00000278833 SYT11Q9BT88 431 aa27.32■■□□□ 1.96
ROM1-201ENST00000278833 STK33Q9BYT3 514 aa27.32■■□□□ 1.96
ROM1-201ENST00000278833 GOLGA6AQ9NYA3 693 aa27.32■■□□□ 1.96
ROM1-201ENST00000278833 A6NNZ2 444 aa27.31■■□□□ 1.96
ROM1-201ENST00000278833 CFBP00751 764 aa27.31■■□□□ 1.96
ROM1-201ENST00000278833 GLI1P08151 1106 aa27.31■■□□□ 1.96
ROM1-201ENST00000278833 FMO5P49326 533 aa27.31■■□□□ 1.96
ROM1-201ENST00000278833 KCNA1Q09470 495 aa27.31■■□□□ 1.96
ROM1-201ENST00000278833 TUBB8Q3ZCM7 444 aa27.31■■□□□ 1.96
ROM1-201ENST00000278833 TCERG1LQ5VWI1 586 aa27.31■■□□□ 1.96
ROM1-201ENST00000278833 RSBN1LQ6PCB5 846 aaPredicted RBP27.31■■□□□ 1.96
ROM1-201ENST00000278833 SPICE1Q8N0Z3 855 aa27.31■■□□□ 1.96
ROM1-201ENST00000278833 RASGEF1CQ8N431 466 aa27.31■■□□□ 1.96
ROM1-201ENST00000278833 RIN2Q8WYP3 895 aaPredicted RBP27.31■■□□□ 1.96
ROM1-201ENST00000278833 GDAP1L1Q96MZ0 367 aa27.31■■□□□ 1.96
ROM1-201ENST00000278833 TEKT3Q9BXF9 490 aa27.31■■□□□ 1.96
ROM1-201ENST00000278833 SUCLA2Q9P2R7 463 aaPredicted RBP27.31■■□□□ 1.96
ROM1-201ENST00000278833 FEM1BQ9UK73 627 aa27.31■■□□□ 1.96
ROM1-201ENST00000278833 RPTORQ8N122 1335 aa27.31■■□□□ 1.96
ROM1-201ENST00000278833 HSF2BPO75031 334 aa27.3■■□□□ 1.96
ROM1-201ENST00000278833 YY1P25490 414 aa27.3■■□□□ 1.96
ROM1-201ENST00000278833 NMT1P30419 496 aaKnown RBP27.3■■□□□ 1.96
ROM1-201ENST00000278833 SOX5P35711 763 aa27.3■■□□□ 1.96
ROM1-201ENST00000278833 ALCAMQ13740 583 aa27.3■■□□□ 1.96
ROM1-201ENST00000278833 SPDYE2Q495Y8 402 aa27.3■■□□□ 1.96
ROM1-201ENST00000278833 LRRC31Q6UY01 552 aa27.3■■□□□ 1.96
ROM1-201ENST00000278833 TPH2Q8IWU9 490 aa27.3■■□□□ 1.96
ROM1-201ENST00000278833 TSEN2Q8NCE0 465 aaKnown RBP27.3■■□□□ 1.96
ROM1-201ENST00000278833 PIGOQ8TEQ8 1089 aa27.3■■□□□ 1.96
ROM1-201ENST00000278833 TSPYL1Q9H0U9 437 aa27.3■■□□□ 1.96
ROM1-201ENST00000278833 PCDHB13Q9Y5F0 798 aa27.3■■□□□ 1.96
ROM1-201ENST00000278833 F8VZ95 297 aa27.3■■□□□ 1.96
ROM1-201ENST00000278833 DDX3XO00571 662 aaKnown RBP eCLIP27.3■■□□□ 1.96
ROM1-201ENST00000278833 CLIC2O15247 247 aa27.3■■□□□ 1.96
ROM1-201ENST00000278833 DDNO94850 711 aaPredicted RBP27.3■■□□□ 1.96
ROM1-201ENST00000278833 DPY19L2Q6NUT2 758 aa27.3■■□□□ 1.96
ROM1-201ENST00000278833 VTI1AQ96AJ9 217 aa27.3■■□□□ 1.96
ROM1-201ENST00000278833 AGPAT3Q9NRZ7 376 aa27.3■■□□□ 1.96
ROM1-201ENST00000278833 ZNF70Q9UC06 446 aaPredicted RBP27.3■■□□□ 1.96
ROM1-201ENST00000278833 GLTPD2A6NH11 291 aa27.29■■□□□ 1.96
ROM1-201ENST00000278833 CCDC188H7C350 402 aa27.29■■□□□ 1.96
ROM1-201ENST00000278833 HSD17B4P51659 736 aa27.29■■□□□ 1.96
ROM1-201ENST00000278833 FAM178BQ8IXR5 827 aa27.29■■□□□ 1.96
ROM1-201ENST00000278833 MTMR14Q8NCE2 650 aa27.29■■□□□ 1.96
ROM1-201ENST00000278833 UNC45AQ9H3U1 944 aa27.29■■□□□ 1.96
ROM1-201ENST00000278833 CCDC172P0C7W6 258 aa27.28■■□□□ 1.96
ROM1-201ENST00000278833 CIAPIN1Q6FI81 312 aa27.28■■□□□ 1.96
ROM1-201ENST00000278833 C12orf56Q8IXR9 622 aa27.28■■□□□ 1.96
ROM1-201ENST00000278833 IQCKQ8N0W5 287 aa27.28■■□□□ 1.96
ROM1-201ENST00000278833 ZNF577Q9BSK1 485 aa27.28■■□□□ 1.96
ROM1-201ENST00000278833 TTC7AQ9ULT0 858 aaPredicted RBP27.28■■□□□ 1.96
ROM1-201ENST00000278833 PPFIA4O75335 1185 aa27.27■■□□□ 1.96
ROM1-201ENST00000278833 SKOR1P84550 965 aa27.27■■□□□ 1.96
ROM1-201ENST00000278833 KRT12Q99456 494 aa27.27■■□□□ 1.96
ROM1-201ENST00000278833 BCAS3Q9H6U6 928 aa27.27■■□□□ 1.96
ROM1-201ENST00000278833 GJA3Q9Y6H8 435 aa27.27■■□□□ 1.96
ROM1-201ENST00000278833 TMEM253P0C7T8 217 aa27.27■■□□□ 1.96
ROM1-201ENST00000278833 MCCD1P59942 119 aaPredicted RBP27.27■■□□□ 1.96
ROM1-201ENST00000278833 MAP3K10Q02779 954 aa27.27■■□□□ 1.96
ROM1-201ENST00000278833 MAPK7Q13164 816 aa27.27■■□□□ 1.96
ROM1-201ENST00000278833 EMC10Q5UCC4 262 aa27.27■■□□□ 1.96
ROM1-201ENST00000278833 FAM83AQ86UY5 434 aa27.27■■□□□ 1.96
ROM1-201ENST00000278833 MXRA8Q9BRK3 442 aa27.27■■□□□ 1.96
ROM1-201ENST00000278833 ISCUQ9H1K1 167 aa27.27■■□□□ 1.96
ROM1-201ENST00000278833 EPB41L5Q9HCM4 733 aa27.27■■□□□ 1.96
ROM1-201ENST00000278833 FRMD4BQ9Y2L6 1034 aa27.27■■□□□ 1.96
ROM1-201ENST00000278833 PGRMC1O00264 195 aaKnown RBP27.26■■□□□ 1.95
ROM1-201ENST00000278833 EVI5O60447 810 aa27.26■■□□□ 1.95
ROM1-201ENST00000278833 CARSP49589 748 aaKnown RBP27.26■■□□□ 1.95
ROM1-201ENST00000278833 CUL1Q13616 776 aa27.26■■□□□ 1.95
ROM1-201ENST00000278833 GPC2Q8N158 579 aa27.26■■□□□ 1.95
ROM1-201ENST00000278833 CASKIN2Q8WXE0 1202 aa27.26■■□□□ 1.95
ROM1-201ENST00000278833 RUFY1Q96T51 708 aa27.26■■□□□ 1.95
ROM1-201ENST00000278833 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.26■■□□□ 1.95
ROM1-201ENST00000278833 PACSIN2Q9UNF0 486 aaPredicted RBP27.26■■□□□ 1.95
ROM1-201ENST00000278833 DIS3Q9Y2L1 958 aaKnown RBP27.26■■□□□ 1.95
ROM1-201ENST00000278833 KCNK3O14649 394 aa27.25■■□□□ 1.95
ROM1-201ENST00000278833 GUCY2DQ02846 1103 aa27.25■■□□□ 1.95
ROM1-201ENST00000278833 TNIP1Q15025 636 aa27.25■■□□□ 1.95
ROM1-201ENST00000278833 ENOX2Q16206 610 aaKnown RBP27.25■■□□□ 1.95
ROM1-201ENST00000278833 CCDC174Q6PII3 467 aa27.25■■□□□ 1.95
ROM1-201ENST00000278833 SRLQ86TD4 932 aa27.25■■□□□ 1.95
ROM1-201ENST00000278833 LNX1Q8TBB1 728 aaPredicted RBP27.25■■□□□ 1.95
ROM1-201ENST00000278833 ZNF526Q8TF50 670 aaPredicted RBP27.25■■□□□ 1.95
ROM1-201ENST00000278833 GPR88Q9GZN0 384 aa27.25■■□□□ 1.95
ROM1-201ENST00000278833 WRAP73Q9P2S5 460 aaPredicted RBP27.25■■□□□ 1.95
ROM1-201ENST00000278833 TCP10L2B9ZVM9 353 aa27.25■■□□□ 1.95
ROM1-201ENST00000278833 P4HA2O15460 535 aa27.25■■□□□ 1.95
ROM1-201ENST00000278833 RAD51CO43502 376 aa27.25■■□□□ 1.95
ROM1-201ENST00000278833 HSPA9P38646 679 aaKnown RBP27.25■■□□□ 1.95
ROM1-201ENST00000278833 ZC2HC1CQ53FD0 456 aaPredicted RBP27.25■■□□□ 1.95
ROM1-201ENST00000278833 LDHDQ86WU2 507 aa27.25■■□□□ 1.95
ROM1-201ENST00000278833 SAMD3Q8N6K7 520 aa27.25■■□□□ 1.95
ROM1-201ENST00000278833 HES6Q96HZ4 224 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms