RNA–Protein interactions for RNA: ENST00000228264.10

DDX11-201, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best) BASIC

Gene DDX11, Length 3,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-201ENST00000228264 EMILIN3Q9NT22 766 aa11.34□□□□□ -0.59
DDX11-201ENST00000228264 CCDC87Q9NVE4 849 aa11.34□□□□□ -0.59
DDX11-201ENST00000228264 MYL1P05976 194 aa11.33□□□□□ -0.6
DDX11-201ENST00000228264 KRT13P13646 458 aa11.33□□□□□ -0.6
DDX11-201ENST00000228264 TUBP50607 506 aa11.33□□□□□ -0.6
DDX11-201ENST00000228264 DDB1Q16531 1140 aa11.33□□□□□ -0.6
DDX11-201ENST00000228264 TRMT1LQ7Z2T5 733 aaKnown RBP11.33□□□□□ -0.6
DDX11-201ENST00000228264 CYP2W1Q8TAV3 490 aa11.33□□□□□ -0.6
DDX11-201ENST00000228264 SPOCK2Q92563 424 aa11.33□□□□□ -0.6
DDX11-201ENST00000228264 TLCD1Q96CP7 247 aa11.33□□□□□ -0.6
DDX11-201ENST00000228264 SPDL1Q96EA4 605 aa11.33□□□□□ -0.6
DDX11-201ENST00000228264 NGLY1Q96IV0 654 aa11.33□□□□□ -0.6
DDX11-201ENST00000228264 AK8Q96MA6 479 aa11.33□□□□□ -0.6
DDX11-201ENST00000228264 USP40Q9NVE5 1235 aa11.33□□□□□ -0.6
DDX11-201ENST00000228264 AIPL1Q9NZN9 384 aa11.33□□□□□ -0.6
DDX11-201ENST00000228264 STXBP5LQ9Y2K9 1186 aa11.33□□□□□ -0.6
DDX11-201ENST00000228264 IGF2BP3O00425 579 aaKnown RBP eCLIP11.33□□□□□ -0.6
DDX11-201ENST00000228264 ABL2P42684 1182 aa11.33□□□□□ -0.6
DDX11-201ENST00000228264 RPL21P46778 160 aaKnown RBP11.33□□□□□ -0.6
DDX11-201ENST00000228264 CDK8P49336 464 aa11.33□□□□□ -0.6
DDX11-201ENST00000228264 ERFP50548 548 aa11.33□□□□□ -0.6
DDX11-201ENST00000228264 TRIP13Q15645 432 aaPredicted RBP11.33□□□□□ -0.6
DDX11-201ENST00000228264 DAGLBQ8NCG7 672 aa11.33□□□□□ -0.6
DDX11-201ENST00000228264 C8orf37Q96NL8 207 aa11.33□□□□□ -0.6
DDX11-201ENST00000228264 TMX4Q9H1E5 349 aaPredicted RBP11.33□□□□□ -0.6
DDX11-201ENST00000228264 ATP8A2Q9NTI2 1148 aa11.33□□□□□ -0.6
DDX11-201ENST00000228264 NKX1-2Q9UD57 310 aaPredicted RBP11.33□□□□□ -0.6
DDX11-201ENST00000228264 TBK1Q9UHD2 729 aa11.33□□□□□ -0.6
DDX11-201ENST00000228264 STRCP1A6NGW2 1772 aa11.33□□□□□ -0.6
DDX11-201ENST00000228264 TISP43B9A030 160 aa11.33□□□□□ -0.6
DDX11-201ENST00000228264 TRIM49P0CI25 452 aa11.33□□□□□ -0.6
DDX11-201ENST00000228264 TRIM49CP0CI26 452 aa11.33□□□□□ -0.6
DDX11-201ENST00000228264 RARAP10276 462 aa11.33□□□□□ -0.6
DDX11-201ENST00000228264 KLRC3Q07444 240 aa11.33□□□□□ -0.6
DDX11-201ENST00000228264 MGAT5Q09328 741 aa11.33□□□□□ -0.6
DDX11-201ENST00000228264 MTA1Q13330 715 aa11.33□□□□□ -0.6
DDX11-201ENST00000228264 PICALMQ13492 652 aa11.33□□□□□ -0.6
DDX11-201ENST00000228264 MFSD4BQ5TF39 518 aa11.33□□□□□ -0.6
DDX11-201ENST00000228264 KRT79Q5XKE5 535 aa11.33□□□□□ -0.6
DDX11-201ENST00000228264 CCDC63Q8NA47 563 aa11.33□□□□□ -0.6
DDX11-201ENST00000228264 ACTRT1Q8TDG2 376 aa11.33□□□□□ -0.6
DDX11-201ENST00000228264 SLC20A1Q8WUM9 679 aa11.33□□□□□ -0.6
DDX11-201ENST00000228264 KIAA1551Q9HCM1 1747 aa11.32□□□□□ -0.6
DDX11-201ENST00000228264 ACSL3O95573 720 aa11.32□□□□□ -0.6
DDX11-201ENST00000228264 CYP11B2P19099 503 aa11.32□□□□□ -0.6
DDX11-201ENST00000228264 ARHGAP44Q17R89 818 aa11.32□□□□□ -0.6
DDX11-201ENST00000228264 TMEM266Q2M3C6 531 aa11.32□□□□□ -0.6
DDX11-201ENST00000228264 PARP10Q53GL7 1025 aa11.32□□□□□ -0.6
DDX11-201ENST00000228264 BZW1Q7L1Q6 419 aaKnown RBP11.32□□□□□ -0.6
DDX11-201ENST00000228264 KRT25Q7Z3Z0 450 aa11.32□□□□□ -0.6
DDX11-201ENST00000228264 SFR1Q86XK3 245 aa11.32□□□□□ -0.6
DDX11-201ENST00000228264 TXLNGYQ9BZA5 131 aa11.32□□□□□ -0.6
DDX11-201ENST00000228264 C6orf50Q9HD87 102 aa11.32□□□□□ -0.6
DDX11-201ENST00000228264 SLC12A4Q9UP95 1085 aa11.32□□□□□ -0.6
DDX11-201ENST00000228264 ANKRD36CQ5JPF3 1778 aa11.32□□□□□ -0.6
DDX11-201ENST00000228264 BHMG1C9JSJ3 638 aaPredicted RBP11.32□□□□□ -0.6
DDX11-201ENST00000228264 DDX3YO15523 660 aaKnown RBP11.32□□□□□ -0.6
DDX11-201ENST00000228264 PLA2G4BP0C869 781 aa11.32□□□□□ -0.6
DDX11-201ENST00000228264 GNAQP50148 359 aa11.32□□□□□ -0.6
DDX11-201ENST00000228264 NCALDP61601 193 aa11.32□□□□□ -0.6
DDX11-201ENST00000228264 ZC3H12AQ5D1E8 599 aaKnown RBP11.32□□□□□ -0.6
DDX11-201ENST00000228264 CCDC197Q8NCU1 140 aa11.32□□□□□ -0.6
DDX11-201ENST00000228264 ZSWIM2Q8NEG5 633 aa11.32□□□□□ -0.6
DDX11-201ENST00000228264 PARD3BQ8TEW8 1205 aa11.32□□□□□ -0.6
DDX11-201ENST00000228264 TMEM237Q96Q45 408 aa11.32□□□□□ -0.6
DDX11-201ENST00000228264 TSG101Q99816 390 aa11.32□□□□□ -0.6
DDX11-201ENST00000228264 KCNMB3Q9NPA1 279 aa11.32□□□□□ -0.6
DDX11-201ENST00000228264 ETAA1Q9NY74 926 aa11.32□□□□□ -0.6
DDX11-201ENST00000228264 SNED1Q8TER0 1413 aa11.32□□□□□ -0.6
DDX11-201ENST00000228264 PVALEFA0A1B0GWK0 134 aa11.32□□□□□ -0.6
DDX11-201ENST00000228264 TCP11X1B4DZS4 312 aa11.32□□□□□ -0.6
DDX11-201ENST00000228264 BAG3O95817 575 aa11.32□□□□□ -0.6
DDX11-201ENST00000228264 EZRP15311 586 aaKnown RBP11.32□□□□□ -0.6
DDX11-201ENST00000228264 SNX1Q13596 522 aa11.32□□□□□ -0.6
DDX11-201ENST00000228264 UBE4AQ14139 1066 aa11.32□□□□□ -0.6
DDX11-201ENST00000228264 PLS1Q14651 629 aa11.32□□□□□ -0.6
DDX11-201ENST00000228264 TMEM119Q4V9L6 283 aa11.32□□□□□ -0.6
DDX11-201ENST00000228264 LRIG3Q6UXM1 1119 aa11.32□□□□□ -0.6
DDX11-201ENST00000228264 FAM47EQ6ZV65 393 aa11.32□□□□□ -0.6
DDX11-201ENST00000228264 SH3GL3Q99963 347 aa11.32□□□□□ -0.6
DDX11-201ENST00000228264 CUEDC2Q9H467 287 aa11.32□□□□□ -0.6
DDX11-201ENST00000228264 ZNF287Q9HBT7 754 aa11.32□□□□□ -0.6
DDX11-201ENST00000228264 GRHL1Q9NZI5 618 aa11.32□□□□□ -0.6
DDX11-201ENST00000228264 GCNT4Q9P109 453 aa11.32□□□□□ -0.6
DDX11-201ENST00000228264 DDX25Q9UHL0 483 aaKnown RBP11.32□□□□□ -0.6
DDX11-201ENST00000228264 LOC102724428A0A0B4J2F2 783 aa11.31□□□□□ -0.6
DDX11-201ENST00000228264 EVI5O60447 810 aa11.31□□□□□ -0.6
DDX11-201ENST00000228264 MRPL12P52815 198 aaKnown RBP11.31□□□□□ -0.6
DDX11-201ENST00000228264 SIK1P57059 783 aa11.31□□□□□ -0.6
DDX11-201ENST00000228264 DR1Q01658 176 aa11.31□□□□□ -0.6
DDX11-201ENST00000228264 LACTB2Q53H82 288 aaPredicted RBP11.31□□□□□ -0.6
DDX11-201ENST00000228264 C2CD6Q53TS8 623 aa11.31□□□□□ -0.6
DDX11-201ENST00000228264 HP1BP3Q5SSJ5 553 aaPredicted RBP11.31□□□□□ -0.6
DDX11-201ENST00000228264 TRIM68Q6AZZ1 485 aa11.31□□□□□ -0.6
DDX11-201ENST00000228264 CYP4X1Q8N118 509 aa11.31□□□□□ -0.6
DDX11-201ENST00000228264 FITM2Q8N6M3 262 aa11.31□□□□□ -0.6
DDX11-201ENST00000228264 LMBR1Q8WVP7 490 aa11.31□□□□□ -0.6
DDX11-201ENST00000228264 LRRC45Q96CN5 670 aa11.31□□□□□ -0.6
DDX11-201ENST00000228264 SH2D3AQ9BRG2 576 aa11.31□□□□□ -0.6
DDX11-201ENST00000228264 RUSC1Q9BVN2 902 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms