RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 SUPT20HL2P0C7V6 817 aa18.88■□□□□ 0.61
RABGGTA-201ENST00000216840 SLC9A1P19634 815 aa18.88■□□□□ 0.61
RABGGTA-201ENST00000216840 GJA5P36382 358 aa18.88■□□□□ 0.61
RABGGTA-201ENST00000216840 PEX3P56589 373 aa18.88■□□□□ 0.61
RABGGTA-201ENST00000216840 MYBPC2Q14324 1141 aa18.88■□□□□ 0.61
RABGGTA-201ENST00000216840 HGSNATQ68CP4 663 aa18.88■□□□□ 0.61
RABGGTA-201ENST00000216840 GPAT2Q6NUI2 795 aa18.88■□□□□ 0.61
RABGGTA-201ENST00000216840 MIS18BP1Q6P0N0 1132 aa18.88■□□□□ 0.61
RABGGTA-201ENST00000216840 SEPT14Q6ZU15 432 aa18.88■□□□□ 0.61
RABGGTA-201ENST00000216840 CYFIP1Q7L576 1253 aa18.88■□□□□ 0.61
RABGGTA-201ENST00000216840 FASTKD5Q7L8L6 764 aaKnown RBP18.88■□□□□ 0.61
RABGGTA-201ENST00000216840 SLC35F6Q8N357 371 aa18.88■□□□□ 0.61
RABGGTA-201ENST00000216840 LRRN4CLQ8ND94 238 aa18.88■□□□□ 0.61
RABGGTA-201ENST00000216840 CEP170P1Q96L14 293 aa18.88■□□□□ 0.61
RABGGTA-201ENST00000216840 RBPJLQ9UBG7 517 aa18.88■□□□□ 0.61
RABGGTA-201ENST00000216840 TFR2Q9UP52 801 aa18.88■□□□□ 0.61
RABGGTA-201ENST00000216840 FRMD4BQ9Y2L6 1034 aa18.88■□□□□ 0.61
RABGGTA-201ENST00000216840 TLR2O60603 784 aa18.87■□□□□ 0.61
RABGGTA-201ENST00000216840 IPO7O95373 1038 aaKnown RBP18.87■□□□□ 0.61
RABGGTA-201ENST00000216840 SLC25A27O95847 323 aa18.87■□□□□ 0.61
RABGGTA-201ENST00000216840 ACTN1P12814 892 aa18.87■□□□□ 0.61
RABGGTA-201ENST00000216840 PON1P27169 355 aa18.87■□□□□ 0.61
RABGGTA-201ENST00000216840 CYP27A1Q02318 531 aa18.87■□□□□ 0.61
RABGGTA-201ENST00000216840 EXOC3L4Q17RC7 722 aa18.87■□□□□ 0.61
RABGGTA-201ENST00000216840 SFMBT2Q5VUG0 894 aa18.87■□□□□ 0.61
RABGGTA-201ENST00000216840 KIAA1328Q86T90 577 aa18.87■□□□□ 0.61
RABGGTA-201ENST00000216840 GPIHBP1Q8IV16 184 aa18.87■□□□□ 0.61
RABGGTA-201ENST00000216840 ANKRD7Q92527 254 aa18.87■□□□□ 0.61
RABGGTA-201ENST00000216840 GUCA1BQ9UMX6 200 aa18.87■□□□□ 0.61
RABGGTA-201ENST00000216840 IGSF9BQ9UPX0 1349 aa18.87■□□□□ 0.61
RABGGTA-201ENST00000216840 GTPBP10A4D1E9 387 aaKnown RBP18.86■□□□□ 0.61
RABGGTA-201ENST00000216840 RCCD1A6NED2 376 aa18.86■□□□□ 0.61
RABGGTA-201ENST00000216840 SLC16A4O15374 487 aa18.86■□□□□ 0.61
RABGGTA-201ENST00000216840 ATG7O95352 703 aa18.86■□□□□ 0.61
RABGGTA-201ENST00000216840 LCA5LO95447 670 aa18.86■□□□□ 0.61
RABGGTA-201ENST00000216840 OSBPP22059 807 aa18.86■□□□□ 0.61
RABGGTA-201ENST00000216840 KIF11P52732 1056 aa18.86■□□□□ 0.61
RABGGTA-201ENST00000216840 PRKCEQ02156 737 aa18.86■□□□□ 0.61
RABGGTA-201ENST00000216840 MAPK8IP2Q13387 824 aaPredicted RBP18.86■□□□□ 0.61
RABGGTA-201ENST00000216840 GBP6Q6ZN66 633 aa18.86■□□□□ 0.61
RABGGTA-201ENST00000216840 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.86■□□□□ 0.61
RABGGTA-201ENST00000216840 SLC17A8Q8NDX2 589 aa18.86■□□□□ 0.61
RABGGTA-201ENST00000216840 TMEM174Q8WUU8 243 aa18.86■□□□□ 0.61
RABGGTA-201ENST00000216840 JAKMIP2Q96AA8 810 aa18.86■□□□□ 0.61
RABGGTA-201ENST00000216840 PDLIM7Q9NR12 457 aa18.86■□□□□ 0.61
RABGGTA-201ENST00000216840 MRFAP1Q9Y605 127 aa18.86■□□□□ 0.61
RABGGTA-201ENST00000216840 ASTE1Q2TB18 679 aaPredicted RBP18.86■□□□□ 0.61
RABGGTA-201ENST00000216840 Q3C1V9 767 aa18.86■□□□□ 0.61
RABGGTA-201ENST00000216840 CCDC122Q5T0U0 273 aa18.86■□□□□ 0.61
RABGGTA-201ENST00000216840 KLHDC7AQ5VTJ3 777 aa18.86■□□□□ 0.61
RABGGTA-201ENST00000216840 PNMA8AQ86V59 439 aaPredicted RBP18.86■□□□□ 0.61
RABGGTA-201ENST00000216840 CGNQ9P2M7 1197 aaKnown RBP18.86■□□□□ 0.61
RABGGTA-201ENST00000216840 SEPT9Q9UHD8 586 aaPredicted RBP18.86■□□□□ 0.61
RABGGTA-201ENST00000216840 SYNGAP1Q96PV0 1343 aa18.86■□□□□ 0.61
RABGGTA-201ENST00000216840 ZNFX1Q9P2E3 1918 aaKnown RBP18.86■□□□□ 0.61
RABGGTA-201ENST00000216840 SSU72P8A0A1W2PR75 194 aa18.85■□□□□ 0.61
RABGGTA-201ENST00000216840 TISP43B9A030 160 aa18.85■□□□□ 0.61
RABGGTA-201ENST00000216840 EXOC3O60645 756 aa18.85■□□□□ 0.61
RABGGTA-201ENST00000216840 VAV2P52735 878 aa18.85■□□□□ 0.61
RABGGTA-201ENST00000216840 SPA17Q15506 151 aa18.85■□□□□ 0.61
RABGGTA-201ENST00000216840 C12orf56Q8IXR9 622 aa18.85■□□□□ 0.61
RABGGTA-201ENST00000216840 ZNF526Q8TF50 670 aaPredicted RBP18.85■□□□□ 0.61
RABGGTA-201ENST00000216840 LACRTQ9GZZ8 138 aa18.85■□□□□ 0.61
RABGGTA-201ENST00000216840 SIX2Q9NPC8 291 aa18.85■□□□□ 0.61
RABGGTA-201ENST00000216840 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.85■□□□□ 0.61
RABGGTA-201ENST00000216840 V9GYY5 206 aaPredicted RBP18.85■□□□□ 0.61
RABGGTA-201ENST00000216840 SERPING1P05155 500 aa18.85■□□□□ 0.61
RABGGTA-201ENST00000216840 UBA1P22314 1058 aaKnown RBP18.85■□□□□ 0.61
RABGGTA-201ENST00000216840 COPB2P35606 906 aa18.85■□□□□ 0.61
RABGGTA-201ENST00000216840 NPTX2P47972 431 aa18.85■□□□□ 0.61
RABGGTA-201ENST00000216840 PPP2R5AQ15172 486 aa18.85■□□□□ 0.61
RABGGTA-201ENST00000216840 XKR3Q5GH77 459 aa18.85■□□□□ 0.61
RABGGTA-201ENST00000216840 BSNDQ8WZ55 320 aa18.85■□□□□ 0.61
RABGGTA-201ENST00000216840 KIFAP3Q92845 792 aa18.85■□□□□ 0.61
RABGGTA-201ENST00000216840 DEF6Q9H4E7 631 aa18.85■□□□□ 0.61
RABGGTA-201ENST00000216840 CYP26B1Q9NR63 512 aa18.85■□□□□ 0.61
RABGGTA-201ENST00000216840 AIPL1Q9NZN9 384 aa18.85■□□□□ 0.61
RABGGTA-201ENST00000216840 CTAGE9A4FU28 777 aa18.84■□□□□ 0.61
RABGGTA-201ENST00000216840 SOCS7O14512 581 aa18.84■□□□□ 0.61
RABGGTA-201ENST00000216840 KRT86O43790 486 aa18.84■□□□□ 0.61
RABGGTA-201ENST00000216840 AKR1B10O60218 316 aa18.84■□□□□ 0.61
RABGGTA-201ENST00000216840 DGAT1O75907 488 aa18.84■□□□□ 0.61
RABGGTA-201ENST00000216840 UCHL3P15374 230 aa18.84■□□□□ 0.61
RABGGTA-201ENST00000216840 SMTNP53814 917 aa18.84■□□□□ 0.61
RABGGTA-201ENST00000216840 SOX10P56693 466 aa18.84■□□□□ 0.61
RABGGTA-201ENST00000216840 DMP1Q13316 513 aaPredicted RBP18.84■□□□□ 0.61
RABGGTA-201ENST00000216840 RAPGEF1Q13905 1077 aa18.84■□□□□ 0.61
RABGGTA-201ENST00000216840 SLC9C1Q4G0N8 1177 aa18.84■□□□□ 0.61
RABGGTA-201ENST00000216840 TMEM161BQ8NDZ6 487 aa18.84■□□□□ 0.61
RABGGTA-201ENST00000216840 CARD6Q9BX69 1037 aa18.84■□□□□ 0.61
RABGGTA-201ENST00000216840 PCIF1Q9H4Z3 704 aa18.84■□□□□ 0.61
RABGGTA-201ENST00000216840 XPNPEP1Q9NQW7 623 aa18.84■□□□□ 0.61
RABGGTA-201ENST00000216840 ZNF302Q9NR11 478 aa18.84■□□□□ 0.61
RABGGTA-201ENST00000216840 GCNT4Q9P109 453 aa18.84■□□□□ 0.61
RABGGTA-201ENST00000216840 PCDHA13Q9Y5I0 950 aa18.84■□□□□ 0.61
RABGGTA-201ENST00000216840 MAFBQ9Y5Q3 323 aaPredicted RBP18.84■□□□□ 0.61
RABGGTA-201ENST00000216840 CCDC169A6NNP5 214 aa18.83■□□□□ 0.61
RABGGTA-201ENST00000216840 ATP4AP20648 1035 aa18.83■□□□□ 0.61
RABGGTA-201ENST00000216840 FMO5P49326 533 aa18.83■□□□□ 0.61
RABGGTA-201ENST00000216840 SNRPFP62306 86 aaKnown RBP18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms