RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 INO80BQ9C086 356 aaPredicted RBP19.42■□□□□ 0.7
MRPL28-201ENST00000199706 TMX1Q9H3N1 280 aa19.42■□□□□ 0.7
MRPL28-201ENST00000199706 ZSCAN16Q9H4T2 348 aaPredicted RBP19.42■□□□□ 0.7
MRPL28-201ENST00000199706 CDHR5Q9HBB8 845 aa19.42■□□□□ 0.7
MRPL28-201ENST00000199706 C1orf112Q9NSG2 853 aa19.42■□□□□ 0.7
MRPL28-201ENST00000199706 SUCLA2Q9P2R7 463 aaPredicted RBP19.42■□□□□ 0.7
MRPL28-201ENST00000199706 ENPP3O14638 875 aa19.41■□□□□ 0.7
MRPL28-201ENST00000199706 STX6O43752 255 aa19.41■□□□□ 0.7
MRPL28-201ENST00000199706 CA3P07451 260 aa19.41■□□□□ 0.7
MRPL28-201ENST00000199706 POU5F1BQ06416 359 aa19.41■□□□□ 0.7
MRPL28-201ENST00000199706 RESTQ13127 1097 aa19.41■□□□□ 0.7
MRPL28-201ENST00000199706 MXD4Q14582 209 aaPredicted RBP19.41■□□□□ 0.7
MRPL28-201ENST00000199706 PCBP1Q15365 356 aaKnown RBP eCLIP19.41■□□□□ 0.7
MRPL28-201ENST00000199706 PPP2R2DQ66LE6 453 aa19.41■□□□□ 0.7
MRPL28-201ENST00000199706 FAM228AQ86W67 206 aa19.41■□□□□ 0.7
MRPL28-201ENST00000199706 ZNF579Q8NAF0 562 aaKnown RBP19.41■□□□□ 0.7
MRPL28-201ENST00000199706 LINC01599Q8WXQ3 324 aa19.41■□□□□ 0.7
MRPL28-201ENST00000199706 AK8Q96MA6 479 aa19.41■□□□□ 0.7
MRPL28-201ENST00000199706 CCDC43Q96MW1 224 aaKnown RBP19.41■□□□□ 0.7
MRPL28-201ENST00000199706 MTRQ99707 1265 aa19.41■□□□□ 0.7
MRPL28-201ENST00000199706 ZBED2Q9BTP6 218 aa19.41■□□□□ 0.7
MRPL28-201ENST00000199706 GCOM2Q9BZD3 368 aaPredicted RBP19.41■□□□□ 0.7
MRPL28-201ENST00000199706 NKX2-4Q9H2Z4 354 aa19.41■□□□□ 0.7
MRPL28-201ENST00000199706 RC3H2Q9HBD1 1191 aaKnown RBP19.41■□□□□ 0.7
MRPL28-201ENST00000199706 ATP6V0A4Q9HBG4 840 aa19.41■□□□□ 0.7
MRPL28-201ENST00000199706 ST3GAL5Q9UNP4 418 aa19.41■□□□□ 0.7
MRPL28-201ENST00000199706 MTMR6Q9Y217 621 aa19.41■□□□□ 0.7
MRPL28-201ENST00000199706 GINS2Q9Y248 185 aa19.41■□□□□ 0.7
MRPL28-201ENST00000199706 STXBP5LQ9Y2K9 1186 aa19.41■□□□□ 0.7
MRPL28-201ENST00000199706 COL4A3BPQ9Y5P4 624 aa19.41■□□□□ 0.7
MRPL28-201ENST00000199706 MYH15Q9Y2K3 1946 aa19.41■□□□□ 0.7
MRPL28-201ENST00000199706 COL6A3P12111 3177 aa19.4■□□□□ 0.7
MRPL28-201ENST00000199706 RALGAPA2Q2PPJ7 1873 aa19.4■□□□□ 0.7
MRPL28-201ENST00000199706 MCPH1Q8NEM0 835 aa19.4■□□□□ 0.7
MRPL28-201ENST00000199706 NLRP7Q8WX94 980 aa19.4■□□□□ 0.7
MRPL28-201ENST00000199706 SH2D3AQ9BRG2 576 aa19.4■□□□□ 0.7
MRPL28-201ENST00000199706 XPNPEP1Q9NQW7 623 aa19.4■□□□□ 0.7
MRPL28-201ENST00000199706 RGS18Q9NS28 235 aa19.4■□□□□ 0.7
MRPL28-201ENST00000199706 ZBTB39O15060 712 aa19.39■□□□□ 0.69
MRPL28-201ENST00000199706 SFPQP23246 707 aaKnown RBP eCLIP19.39■□□□□ 0.69
MRPL28-201ENST00000199706 CCT6AP40227 531 aaKnown RBP19.39■□□□□ 0.69
MRPL28-201ENST00000199706 TAP1Q03518 808 aa19.39■□□□□ 0.69
MRPL28-201ENST00000199706 DSC3Q14574 896 aa19.39■□□□□ 0.69
MRPL28-201ENST00000199706 IL17AQ16552 155 aa19.39■□□□□ 0.69
MRPL28-201ENST00000199706 HYIQ5T013 277 aa19.39■□□□□ 0.69
MRPL28-201ENST00000199706 KRT79Q5XKE5 535 aa19.39■□□□□ 0.69
MRPL28-201ENST00000199706 POTEGQ6S5H5 508 aa19.39■□□□□ 0.69
MRPL28-201ENST00000199706 FERMT3Q86UX7 667 aa19.39■□□□□ 0.69
MRPL28-201ENST00000199706 IFNLR1Q8IU57 520 aaPredicted RBP19.39■□□□□ 0.69
MRPL28-201ENST00000199706 NPAS4Q8IUM7 802 aa19.39■□□□□ 0.69
MRPL28-201ENST00000199706 TRAIPQ9BWF2 469 aa19.39■□□□□ 0.69
MRPL28-201ENST00000199706 NFKBIZQ9BYH8 718 aa19.39■□□□□ 0.69
MRPL28-201ENST00000199706 MYOGP15173 224 aa19.38■□□□□ 0.69
MRPL28-201ENST00000199706 SARSP49591 514 aaKnown RBP19.38■□□□□ 0.69
MRPL28-201ENST00000199706 NFX1Q12986 1120 aaKnown RBP19.38■□□□□ 0.69
MRPL28-201ENST00000199706 SLC24A5Q71RS6 500 aa19.38■□□□□ 0.69
MRPL28-201ENST00000199706 SRGAP1Q7Z6B7 1085 aa19.38■□□□□ 0.69
MRPL28-201ENST00000199706 RTN4RL1Q86UN2 441 aaPredicted RBP19.38■□□□□ 0.69
MRPL28-201ENST00000199706 RHPN2Q8IUC4 686 aa19.38■□□□□ 0.69
MRPL28-201ENST00000199706 SNX29Q8TEQ0 813 aa19.38■□□□□ 0.69
MRPL28-201ENST00000199706 PIGOQ8TEQ8 1089 aa19.38■□□□□ 0.69
MRPL28-201ENST00000199706 PRPF31Q8WWY3 499 aaKnown RBP19.38■□□□□ 0.69
MRPL28-201ENST00000199706 SCLT1Q96NL6 688 aa19.38■□□□□ 0.69
MRPL28-201ENST00000199706 CDX2Q99626 313 aaPredicted RBP19.38■□□□□ 0.69
MRPL28-201ENST00000199706 ELAC1Q9H777 363 aaKnown RBP19.38■□□□□ 0.69
MRPL28-201ENST00000199706 IFT122Q9HBG6 1241 aa19.38■□□□□ 0.69
MRPL28-201ENST00000199706 CHST12Q9NRB3 414 aa19.38■□□□□ 0.69
MRPL28-201ENST00000199706 C9IYK1 514 aa19.37■□□□□ 0.69
MRPL28-201ENST00000199706 HSP90AA1P07900 732 aaKnown RBP19.37■□□□□ 0.69
MRPL28-201ENST00000199706 STAG3L1P0CL83 205 aa19.37■□□□□ 0.69
MRPL28-201ENST00000199706 ARL2P36404 184 aa19.37■□□□□ 0.69
MRPL28-201ENST00000199706 FAM189BP81408 668 aa19.37■□□□□ 0.69
MRPL28-201ENST00000199706 LAMTOR4Q0VGL1 99 aa19.37■□□□□ 0.69
MRPL28-201ENST00000199706 GRIN2CQ14957 1233 aa19.37■□□□□ 0.69
MRPL28-201ENST00000199706 RSPH1Q8WYR4 309 aa19.37■□□□□ 0.69
MRPL28-201ENST00000199706 SAMD11Q96NU1 681 aa19.37■□□□□ 0.69
MRPL28-201ENST00000199706 NT5C3AQ9H0P0 336 aa19.37■□□□□ 0.69
MRPL28-201ENST00000199706 DACT1Q9NYF0 836 aa19.37■□□□□ 0.69
MRPL28-201ENST00000199706 DAXXQ9UER7 740 aaPredicted RBP19.37■□□□□ 0.69
MRPL28-201ENST00000199706 ADGRA3Q8IWK6 1321 aa19.36■□□□□ 0.69
MRPL28-201ENST00000199706 A0A087WZ62 844 aa19.36■□□□□ 0.69
MRPL28-201ENST00000199706 DENND3A2RUS2 1198 aa19.36■□□□□ 0.69
MRPL28-201ENST00000199706 LONP1P36776 959 aaKnown RBP19.36■□□□□ 0.69
MRPL28-201ENST00000199706 ERVK-21P61565 698 aa19.36■□□□□ 0.69
MRPL28-201ENST00000199706 TFDP1Q14186 410 aa19.36■□□□□ 0.69
MRPL28-201ENST00000199706 SF3A1Q15459 793 aaKnown RBP19.36■□□□□ 0.69
MRPL28-201ENST00000199706 TMCO2Q7Z6W1 182 aaPredicted RBP19.36■□□□□ 0.69
MRPL28-201ENST00000199706 TMEM143Q96AN5 459 aa19.36■□□□□ 0.69
MRPL28-201ENST00000199706 ZNF689Q96CS4 500 aaPredicted RBP19.36■□□□□ 0.69
MRPL28-201ENST00000199706 PPP1R16BQ96T49 567 aa19.36■□□□□ 0.69
MRPL28-201ENST00000199706 YME1L1Q96TA2 773 aa19.36■□□□□ 0.69
MRPL28-201ENST00000199706 ADAM2Q99965 735 aa19.36■□□□□ 0.69
MRPL28-201ENST00000199706 FDXACB1Q9BRP7 624 aaPredicted RBP19.36■□□□□ 0.69
MRPL28-201ENST00000199706 MMTAG2Q9BU76 263 aaKnown RBP19.36■□□□□ 0.69
MRPL28-201ENST00000199706 NLRC5Q86WI3 1866 aa19.36■□□□□ 0.69
MRPL28-201ENST00000199706 LCHNA4D1U4 455 aa19.35■□□□□ 0.69
MRPL28-201ENST00000199706 LINC01553A4QN01 128 aa19.35■□□□□ 0.69
MRPL28-201ENST00000199706 ARHGEF35A5YM69 484 aa19.35■□□□□ 0.69
MRPL28-201ENST00000199706 VWA3AA6NCI4 1184 aa19.35■□□□□ 0.69
MRPL28-201ENST00000199706 MGEA5O60502 916 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms