RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Kif2aP28740 705 aa17.32■□□□□ 0.36
Trim39-203ENSMUST00000113706 Gfpt1P47856 697 aa17.32■□□□□ 0.36
Trim39-203ENSMUST00000113706 Top1Q04750 767 aaKnown RBP17.32■□□□□ 0.36
Trim39-203ENSMUST00000113706 Six2Q62232 296 aa17.32■□□□□ 0.36
Trim39-203ENSMUST00000113706 Prl7b1Q8CGZ9 251 aa17.32■□□□□ 0.36
Trim39-203ENSMUST00000113706 Col4a3Q9QZS0 1669 aa17.32■□□□□ 0.36
Trim39-203ENSMUST00000113706 Mdm4O35618 489 aa17.32■□□□□ 0.36
Trim39-203ENSMUST00000113706 Lamp1P11438 406 aaKnown RBP17.32■□□□□ 0.36
Trim39-203ENSMUST00000113706 Ccnd3P30282 292 aa17.32■□□□□ 0.36
Trim39-203ENSMUST00000113706 Gtf2bP62915 316 aa17.32■□□□□ 0.36
Trim39-203ENSMUST00000113706 Frmd8Q3UFK8 466 aa17.32■□□□□ 0.36
Trim39-203ENSMUST00000113706 AlcamQ61490 583 aa17.32■□□□□ 0.36
Trim39-203ENSMUST00000113706 Trim10Q9WUH5 489 aa17.32■□□□□ 0.36
Trim39-203ENSMUST00000113706 Thsd7bQ6P4U0 1607 aa17.32■□□□□ 0.36
Trim39-203ENSMUST00000113706 Sbno2Q7TNB8 1349 aa17.31■□□□□ 0.36
Trim39-203ENSMUST00000113706 Stra6O70491 670 aa17.31■□□□□ 0.36
Trim39-203ENSMUST00000113706 PrkceP16054 737 aa17.31■□□□□ 0.36
Trim39-203ENSMUST00000113706 Cyfip1Q7TMB8 1253 aa17.31■□□□□ 0.36
Trim39-203ENSMUST00000113706 Azin2Q8BVM4 459 aa17.31■□□□□ 0.36
Trim39-203ENSMUST00000113706 Creb3l3Q91XE9 479 aa17.31■□□□□ 0.36
Trim39-203ENSMUST00000113706 GcP21614 476 aa17.31■□□□□ 0.36
Trim39-203ENSMUST00000113706 LxnP70202 222 aa17.31■□□□□ 0.36
Trim39-203ENSMUST00000113706 Pdlim7Q3TJD7 457 aa17.31■□□□□ 0.36
Trim39-203ENSMUST00000113706 Tmem63bQ3TWI9 832 aa17.31■□□□□ 0.36
Trim39-203ENSMUST00000113706 Ctnna3Q65CL1 895 aa17.31■□□□□ 0.36
Trim39-203ENSMUST00000113706 Sestd1Q80UK0 696 aa17.31■□□□□ 0.36
Trim39-203ENSMUST00000113706 Slc4a7Q8BTY2 1034 aa17.31■□□□□ 0.36
Trim39-203ENSMUST00000113706 Hsd3b7Q9EQC1 369 aa17.31■□□□□ 0.36
Trim39-203ENSMUST00000113706 Axin2O88566 840 aa17.3■□□□□ 0.36
Trim39-203ENSMUST00000113706 Bcat1P24288 386 aa17.3■□□□□ 0.36
Trim39-203ENSMUST00000113706 Ccnd2P30280 289 aa17.3■□□□□ 0.36
Trim39-203ENSMUST00000113706 Ankrd13cQ3UX43 541 aa17.3■□□□□ 0.36
Trim39-203ENSMUST00000113706 Zbtb7bQ64321 544 aa17.3■□□□□ 0.36
Trim39-203ENSMUST00000113706 Lrrc1Q80VQ1 524 aa17.3■□□□□ 0.36
Trim39-203ENSMUST00000113706 Ttc7aQ8BGB2 858 aa17.3■□□□□ 0.36
Trim39-203ENSMUST00000113706 RnpepQ8VCT3 650 aaKnown RBP17.3■□□□□ 0.36
Trim39-203ENSMUST00000113706 Mxra8Q9DBV4 442 aa17.3■□□□□ 0.36
Trim39-203ENSMUST00000113706 Gm11549A0A286YD83 63 aa17.3■□□□□ 0.36
Trim39-203ENSMUST00000113706 Foxn2E9Q7L6 429 aa17.3■□□□□ 0.36
Trim39-203ENSMUST00000113706 Rgs22G3UYX5 1258 aa17.3■□□□□ 0.36
Trim39-203ENSMUST00000113706 Tubb4bP68372 445 aaKnown RBP17.3■□□□□ 0.36
Trim39-203ENSMUST00000113706 Sh3gl1Q62419 368 aa17.3■□□□□ 0.36
Trim39-203ENSMUST00000113706 Vmn1r218Q8R261 298 aa17.3■□□□□ 0.36
Trim39-203ENSMUST00000113706 IrgqQ8VIM9 583 aa17.3■□□□□ 0.36
Trim39-203ENSMUST00000113706 Lrrc57Q9D1G5 239 aa17.3■□□□□ 0.36
Trim39-203ENSMUST00000113706 Fthl17aQ9DAX0 182 aa17.3■□□□□ 0.36
Trim39-203ENSMUST00000113706 IydQ9DCX8 285 aa17.3■□□□□ 0.36
Trim39-203ENSMUST00000113706 Calcoco2A2A6M5 331 aa17.3■□□□□ 0.36
Trim39-203ENSMUST00000113706 Serpinc1P32261 465 aa17.3■□□□□ 0.36
Trim39-203ENSMUST00000113706 Pafah1b1P63005 410 aaKnown RBP17.3■□□□□ 0.36
Trim39-203ENSMUST00000113706 Gm10392Q3V3I3 114 aa17.3■□□□□ 0.36
Trim39-203ENSMUST00000113706 Lrrc24Q8BHA1 521 aa17.3■□□□□ 0.36
Trim39-203ENSMUST00000113706 Rpap3Q9D706 660 aa17.3■□□□□ 0.36
Trim39-203ENSMUST00000113706 Prl6a1O35257 230 aa17.29■□□□□ 0.36
Trim39-203ENSMUST00000113706 Adcy7P51829 1099 aa17.29■□□□□ 0.36
Trim39-203ENSMUST00000113706 Fndc3bQ6NWW9 1207 aaKnown RBP17.29■□□□□ 0.36
Trim39-203ENSMUST00000113706 Q8C1R3 189 aa17.29■□□□□ 0.36
Trim39-203ENSMUST00000113706 Ddx39aQ8VDW0 427 aaKnown RBP17.29■□□□□ 0.36
Trim39-203ENSMUST00000113706 Asic2Q925H0 512 aa17.29■□□□□ 0.36
Trim39-203ENSMUST00000113706 Tlr5Q9JLF7 859 aa17.29■□□□□ 0.36
Trim39-203ENSMUST00000113706 Tlr2Q9QUN7 784 aa17.29■□□□□ 0.36
Trim39-203ENSMUST00000113706 RptorQ8K4Q0 1335 aa17.29■□□□□ 0.36
Trim39-203ENSMUST00000113706 Lamb2Q61292 1799 aa17.29■□□□□ 0.36
Trim39-203ENSMUST00000113706 Lcmt1A0A0U1RNF2 332 aa17.29■□□□□ 0.36
Trim39-203ENSMUST00000113706 Dhtkd1A2ATU0 921 aa17.29■□□□□ 0.36
Trim39-203ENSMUST00000113706 Zfp597E9Q6S0 419 aa17.29■□□□□ 0.36
Trim39-203ENSMUST00000113706 Zfp408H7BX78 710 aa17.29■□□□□ 0.36
Trim39-203ENSMUST00000113706 Stat4P42228 749 aa17.29■□□□□ 0.36
Trim39-203ENSMUST00000113706 Gas8Q60779 478 aa17.29■□□□□ 0.36
Trim39-203ENSMUST00000113706 Hook2Q7TMK6 716 aa17.29■□□□□ 0.36
Trim39-203ENSMUST00000113706 Zdhhc15Q8BGJ0 337 aa17.29■□□□□ 0.36
Trim39-203ENSMUST00000113706 Med15Q924H2 789 aa17.29■□□□□ 0.36
Trim39-203ENSMUST00000113706 Arhgef10lA2AWP8 1280 aa17.28■□□□□ 0.36
Trim39-203ENSMUST00000113706 Irx2P81066 474 aa17.28■□□□□ 0.36
Trim39-203ENSMUST00000113706 Ly9Q01965 654 aa17.28■□□□□ 0.36
Trim39-203ENSMUST00000113706 Klra9Q2TJJ8 266 aa17.28■□□□□ 0.36
Trim39-203ENSMUST00000113706 Krit1Q6S5J6 736 aa17.28■□□□□ 0.36
Trim39-203ENSMUST00000113706 Dnajc17Q91WT4 303 aa17.28■□□□□ 0.36
Trim39-203ENSMUST00000113706 VillQ91YD6 859 aa17.28■□□□□ 0.36
Trim39-203ENSMUST00000113706 ToporslQ9D2F8 683 aa17.28■□□□□ 0.36
Trim39-203ENSMUST00000113706 Cyp2s1Q9DBX6 501 aa17.28■□□□□ 0.36
Trim39-203ENSMUST00000113706 Slc15a2Q9ES07 729 aa17.28■□□□□ 0.36
Trim39-203ENSMUST00000113706 Sertad2Q9JJG5 309 aa17.28■□□□□ 0.36
Trim39-203ENSMUST00000113706 Prpf40aQ9R1C7 953 aaKnown RBP17.28■□□□□ 0.36
Trim39-203ENSMUST00000113706 Gad1P48318 593 aa17.28■□□□□ 0.36
Trim39-203ENSMUST00000113706 Casp7P97864 303 aa17.28■□□□□ 0.36
Trim39-203ENSMUST00000113706 Rapgef1Q3UHC1 1224 aa17.28■□□□□ 0.36
Trim39-203ENSMUST00000113706 R3hdm4Q4VBF2 262 aa17.28■□□□□ 0.36
Trim39-203ENSMUST00000113706 Tcf12Q61286 706 aa17.28■□□□□ 0.36
Trim39-203ENSMUST00000113706 Dlg4Q62108 724 aa17.28■□□□□ 0.36
Trim39-203ENSMUST00000113706 Ppp2r5aQ6PD03 486 aa17.28■□□□□ 0.36
Trim39-203ENSMUST00000113706 Efcab8Q8C9R9 203 aa17.28■□□□□ 0.36
Trim39-203ENSMUST00000113706 Angel2Q8K1C0 544 aa17.28■□□□□ 0.36
Trim39-203ENSMUST00000113706 Hspbp1Q99P31 357 aaKnown RBP17.28■□□□□ 0.36
Trim39-203ENSMUST00000113706 Smc1aQ9CU62 1233 aaKnown RBP17.28■□□□□ 0.36
Trim39-203ENSMUST00000113706 Abcb11Q9QY30 1321 aa17.28■□□□□ 0.36
Trim39-203ENSMUST00000113706 Acot6Q32Q92 419 aa17.28■□□□□ 0.36
Trim39-203ENSMUST00000113706 Olfm4Q3UZZ4 505 aa17.28■□□□□ 0.36
Trim39-203ENSMUST00000113706 Lrig2Q52KR2 1054 aa17.28■□□□□ 0.36
Trim39-203ENSMUST00000113706 Mapk6Q61532 720 aa17.28■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 65.4 ms