RNA–Protein interactions for RNA: YNL021W

HDA1, Transcript of Putative catalytic subunit of a class II histone deacetylase complex, yeastyeast

Gene HDA1, Length 2,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA1YNL021W YOR389WQ08912 624 aa6.52□□□□□ -1.37
HDA1YNL021W RPL7AP05737 244 aaKnown RBP6.51□□□□□ -1.37
HDA1YNL021W BAR1P12630 587 aa6.51□□□□□ -1.37
HDA1YNL021W CIN8P27895 1000 aa6.51□□□□□ -1.37
HDA1YNL021W DEG1P31115 442 aaKnown RBP6.51□□□□□ -1.37
HDA1YNL021W YKL162CP36052 402 aa6.51□□□□□ -1.37
HDA1YNL021W AIM3P38266 947 aaKnown RBP6.51□□□□□ -1.37
HDA1YNL021W KAP114P53067 1004 aa6.51□□□□□ -1.37
HDA1YNL021W DUG3P53871 357 aa6.51□□□□□ -1.37
HDA1YNL021W APM1Q00776 475 aaPredicted RBP6.51□□□□□ -1.37
HDA1YNL021W LOT6Q07923 191 aa6.51□□□□□ -1.37
HDA1YNL021W RPL7BQ12213 244 aaKnown RBP6.51□□□□□ -1.37
HDA1YNL021W GPI12P23797 304 aa6.5□□□□□ -1.37
HDA1YNL021W PUB1P32588 453 aaKnown RBP RIP-Chip data6.5□□□□□ -1.37not detected
HDA1YNL021W PTR2P32901 601 aa6.5□□□□□ -1.37
HDA1YNL021W YAL037WP39728 267 aa6.5□□□□□ -1.37
HDA1YNL021W ARG2P40360 574 aa6.5□□□□□ -1.37
HDA1YNL021W SCD6P45978 349 aaKnown RBP RIP-Chip data6.5□□□□□ -1.37not detected
HDA1YNL021W PHO23P50947 330 aa6.5□□□□□ -1.37
HDA1YNL021W RTN1Q04947 295 aaKnown RBP6.5□□□□□ -1.37
HDA1YNL021W FSH3Q99369 266 aa6.5□□□□□ -1.37
HDA1YNL021W RPL24AP04449 155 aaKnown RBP6.5□□□□□ -1.37
HDA1YNL021W CDC23P16522 626 aa6.5□□□□□ -1.37
HDA1YNL021W CTR86P25355 563 aa6.5□□□□□ -1.37
HDA1YNL021W MSS51P32335 436 aa6.5□□□□□ -1.37
HDA1YNL021W MTW1P39731 289 aa6.5□□□□□ -1.37
HDA1YNL021W SMM1P53720 384 aaKnown RBP6.5□□□□□ -1.37
HDA1YNL021W AAT1Q01802 451 aa6.5□□□□□ -1.37
HDA1YNL021W FMP30Q02883 468 aa6.5□□□□□ -1.37
HDA1YNL021W YDR387CQ04162 555 aa6.5□□□□□ -1.37
HDA1YNL021W PRP46Q12417 451 aaPredicted RBP6.5□□□□□ -1.37
HDA1YNL021W CDC33P07260 213 aaKnown RBP6.49□□□□□ -1.37
HDA1YNL021W FUS3P16892 353 aaKnown RBP6.49□□□□□ -1.37
HDA1YNL021W MEI5P32489 222 aa6.49□□□□□ -1.37
HDA1YNL021W TOA2P32774 122 aa6.49□□□□□ -1.37
HDA1YNL021W YER079WP40052 210 aaKnown RBP6.49□□□□□ -1.37
HDA1YNL021W FMC1P40491 155 aa6.49□□□□□ -1.37
HDA1YNL021W SNL1P40548 159 aa6.49□□□□□ -1.37
HDA1YNL021W ORC5P50874 479 aa6.49□□□□□ -1.37
HDA1YNL021W AAD15Q08361 143 aa6.49□□□□□ -1.37
HDA1YNL021W ECM29P38737 1868 aa6.49□□□□□ -1.37
HDA1YNL021W APA2P22108 325 aa6.49□□□□□ -1.37
HDA1YNL021W COS9P36034 407 aa6.49□□□□□ -1.37
HDA1YNL021W RCK2P38623 610 aa6.49□□□□□ -1.37
HDA1YNL021W POP1P41812 875 aa6.49□□□□□ -1.37
HDA1YNL021W ASN1P49089 572 aaKnown RBP6.49□□□□□ -1.37
HDA1YNL021W MNN10P50108 393 aaKnown RBP6.49□□□□□ -1.37
HDA1YNL021W YIF1P53845 314 aaKnown RBP6.49□□□□□ -1.37
HDA1YNL021W YPL068CQ02749 293 aa6.49□□□□□ -1.37
HDA1YNL021W PIG1Q06216 648 aa6.49□□□□□ -1.37
HDA1YNL021W YLR049CQ12110 428 aa6.49□□□□□ -1.37
HDA1YNL021W POX1P13711 748 aa6.48□□□□□ -1.37
HDA1YNL021W CSG2P35206 410 aa6.48□□□□□ -1.37
HDA1YNL021W YVH1Q02256 364 aaKnown RBP6.48□□□□□ -1.37
HDA1YNL021W ECI1Q05871 280 aa6.48□□□□□ -1.37
HDA1YNL021W BRX1Q08235 291 aaKnown RBP6.48□□□□□ -1.37
HDA1YNL021W YLL053CP0CD98 152 aa6.47□□□□□ -1.37
HDA1YNL021W MAS2P11914 482 aa6.47□□□□□ -1.37
HDA1YNL021W RPI1P23250 407 aaKnown RBP6.47□□□□□ -1.37
HDA1YNL021W TMT1P32643 299 aa6.47□□□□□ -1.37
HDA1YNL021W GCG1P32656 232 aaKnown RBP6.47□□□□□ -1.37
HDA1YNL021W MAK5P38112 773 aaPredicted RBP6.47□□□□□ -1.37
HDA1YNL021W MRX3P38172 270 aa6.47□□□□□ -1.37
HDA1YNL021W DSE1P40077 573 aa6.47□□□□□ -1.37
HDA1YNL021W CPR7P47103 393 aa6.47□□□□□ -1.37
HDA1YNL021W SCS3P53012 380 aa6.47□□□□□ -1.37
HDA1YNL021W MPS1P54199 764 aa6.47□□□□□ -1.37
HDA1YNL021W YPL014WQ02606 381 aa6.47□□□□□ -1.37
HDA1YNL021W DIG1Q03063 452 aaKnown RBP6.47□□□□□ -1.37
HDA1YNL021W ENT5Q03769 411 aaKnown RBP6.47□□□□□ -1.37
HDA1YNL021W YMR034CQ05131 434 aaPredicted RBP6.47□□□□□ -1.37
HDA1YNL021W CDA2Q06703 312 aa6.47□□□□□ -1.37
HDA1YNL021W UBA3Q99344 299 aa6.47□□□□□ -1.37
HDA1YNL021W CDC8P00572 216 aa6.47□□□□□ -1.37
HDA1YNL021W RPS3P05750 240 aaKnown RBP6.47□□□□□ -1.37
HDA1YNL021W YCP4P25349 247 aaKnown RBP6.47□□□□□ -1.37
HDA1YNL021W MXR2P25566 168 aa6.47□□□□□ -1.37
HDA1YNL021W RPS5P26783 225 aaKnown RBP6.47□□□□□ -1.37
HDA1YNL021W ROT2P38138 954 aa6.47□□□□□ -1.37
HDA1YNL021W YMR134WP40207 237 aa6.47□□□□□ -1.37
HDA1YNL021W GPI15P53961 229 aa6.47□□□□□ -1.37
HDA1YNL021W SPP2Q02521 185 aa6.47□□□□□ -1.37
HDA1YNL021W GTO3Q04806 366 aa6.47□□□□□ -1.37
HDA1YNL021W YOR029WQ12243 111 aa6.47□□□□□ -1.37
HDA1YNL021W FRE7Q12333 620 aa6.47□□□□□ -1.37
HDA1YNL021W TDH2P00358 332 aaKnown RBP6.46□□□□□ -1.37
HDA1YNL021W YCR016WP25617 290 aaKnown RBP6.46□□□□□ -1.37
HDA1YNL021W SKG6P32900 734 aaPredicted RBP6.46□□□□□ -1.37
HDA1YNL021W PCL5P38794 229 aa6.46□□□□□ -1.37
HDA1YNL021W COQ11Q05892 277 aa6.46□□□□□ -1.37
HDA1YNL021W SHS1Q07657 551 aa6.46□□□□□ -1.37
HDA1YNL021W YKL068W-AQ3E826 78 aa6.46□□□□□ -1.37
HDA1YNL021W YLR462WO13556 202 aa6.46□□□□□ -1.38
HDA1YNL021W DST1P07273 309 aa6.46□□□□□ -1.38
HDA1YNL021W MATALPHA1P0CY06 175 aa6.46□□□□□ -1.38
HDA1YNL021W HMLALPHA1P0CY07 175 aa6.46□□□□□ -1.38
HDA1YNL021W MET16P18408 261 aaPredicted RBP6.46□□□□□ -1.38
HDA1YNL021W CBR1P38626 284 aaKnown RBP6.46□□□□□ -1.38
HDA1YNL021W YHL049CP38722 271 aa6.46□□□□□ -1.38
HDA1YNL021W YEL075CP39972 122 aa6.46□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 31.8 ms