RNA–Protein interactions for RNA: YMR088C

VBA1, Transcript of Permease of basic amino acids in the vacuolar membrane, yeastyeast

Gene VBA1, Length 1,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VBA1YMR088C NBL1Q3E7Y6 73 aa5.23□□□□□ -1.57
VBA1YMR088C CPR2P23285 205 aa5.22□□□□□ -1.57
VBA1YMR088C PET18P25362 215 aa5.22□□□□□ -1.57
VBA1YMR088C CBT1P36038 271 aaPredicted RBP5.22□□□□□ -1.57
VBA1YMR088C SHM2P37291 469 aaKnown RBP5.22□□□□□ -1.57
VBA1YMR088C WSC4P38739 605 aa5.22□□□□□ -1.57
VBA1YMR088C GPI16P38875 610 aa5.22□□□□□ -1.57
VBA1YMR088C SRP14P38985 146 aa5.22□□□□□ -1.57
VBA1YMR088C EXO1P39875 702 aa5.22□□□□□ -1.57
VBA1YMR088C PHM8P40025 321 aa5.22□□□□□ -1.57
VBA1YMR088C CDC40P40968 455 aaPredicted RBP5.22□□□□□ -1.57
VBA1YMR088C PMT4P46971 762 aa5.22□□□□□ -1.57
VBA1YMR088C HIT1P46973 164 aa5.22□□□□□ -1.57
VBA1YMR088C MRX5P47007 382 aa5.22□□□□□ -1.57
VBA1YMR088C JJJ3P47138 172 aa5.22□□□□□ -1.57
VBA1YMR088C COS12P53053 380 aa5.22□□□□□ -1.57
VBA1YMR088C RTT102P53330 157 aa5.22□□□□□ -1.57
VBA1YMR088C VPS75P53853 264 aa5.22□□□□□ -1.57
VBA1YMR088C TEP1P53916 434 aa5.22□□□□□ -1.57
VBA1YMR088C SNO1Q03144 224 aa5.22□□□□□ -1.57
VBA1YMR088C YML096WQ04489 525 aa5.22□□□□□ -1.57
VBA1YMR088C TVP18Q04767 167 aa5.22□□□□□ -1.57
VBA1YMR088C TAF9Q05027 157 aa5.22□□□□□ -1.57
VBA1YMR088C CYK3Q07533 885 aa5.22□□□□□ -1.57
VBA1YMR088C LEA1Q08963 238 aaPredicted RBP5.22□□□□□ -1.57
VBA1YMR088C SLF1Q12034 447 aaKnown RBP5.22□□□□□ -1.57
VBA1YMR088C RMP1Q12530 201 aa5.22□□□□□ -1.57
VBA1YMR088C RRP5Q05022 1729 aaKnown RBP5.22□□□□□ -1.57
VBA1YMR088C CHC1P22137 1653 aaKnown RBP5.22□□□□□ -1.57
VBA1YMR088C LEU2P04173 364 aaPredicted RBP5.21□□□□□ -1.57
VBA1YMR088C GCR1P07261 785 aa5.21□□□□□ -1.57
VBA1YMR088C HTS1P07263 546 aaKnown RBP5.21□□□□□ -1.57
VBA1YMR088C RPS18AP0CX55 146 aaKnown RBP5.21□□□□□ -1.57
VBA1YMR088C RPS18BP0CX56 146 aaPredicted RBP5.21□□□□□ -1.57
VBA1YMR088C ATR1P13090 542 aa5.21□□□□□ -1.57
VBA1YMR088C GUK1P15454 187 aaKnown RBP5.21□□□□□ -1.57
VBA1YMR088C VBA3P25594 458 aa5.21□□□□□ -1.57
VBA1YMR088C YCR051WP25631 222 aa5.21□□□□□ -1.57
VBA1YMR088C TRM2P33753 639 aa5.21□□□□□ -1.57
VBA1YMR088C SKT5P34226 696 aa5.21□□□□□ -1.57
VBA1YMR088C SHU2P38957 223 aa5.21□□□□□ -1.57
VBA1YMR088C PUG1P40100 303 aa5.21□□□□□ -1.57
VBA1YMR088C YIL108WP40483 696 aaKnown RBP5.21□□□□□ -1.57
VBA1YMR088C IDP3P53982 420 aaKnown RBP5.21□□□□□ -1.57
VBA1YMR088C HXT11P54862 567 aa5.21□□□□□ -1.57
VBA1YMR088C YMR209CQ03648 457 aa5.21□□□□□ -1.57
VBA1YMR088C RKM2Q03942 479 aa5.21□□□□□ -1.57
VBA1YMR088C MYO5Q04439 1219 aaKnown RBP5.21□□□□□ -1.57
VBA1YMR088C YDR306CQ06640 478 aa5.21□□□□□ -1.57
VBA1YMR088C HIM1Q06674 414 aa5.21□□□□□ -1.57
VBA1YMR088C FMP45Q07651 309 aa5.21□□□□□ -1.57
VBA1YMR088C BSC6Q08280 497 aa5.21□□□□□ -1.57
VBA1YMR088C YOR365CQ08844 703 aa5.21□□□□□ -1.57
VBA1YMR088C SCP1Q08873 200 aa5.21□□□□□ -1.57
VBA1YMR088C TRM13Q12383 476 aa5.21□□□□□ -1.57
VBA1YMR088C KCS1Q12494 1050 aa5.21□□□□□ -1.57
VBA1YMR088C AI1P03875 834 aa5.21□□□□□ -1.58
VBA1YMR088C YFR010W-AP0C5N0 62 aa5.21□□□□□ -1.58
VBA1YMR088C DDI2P0CH63 225 aa5.21□□□□□ -1.58
VBA1YMR088C DDI3P0CH64 225 aa5.21□□□□□ -1.58
VBA1YMR088C YCR061WP25639 631 aa5.21□□□□□ -1.58
VBA1YMR088C YUR1P26725 428 aa5.21□□□□□ -1.58
VBA1YMR088C LDS1P31379 325 aa5.21□□□□□ -1.58
VBA1YMR088C MDH3P32419 343 aaKnown RBP RIP-Chip data5.21□□□□□ -1.58not detected
VBA1YMR088C DUT1P33317 147 aa5.21□□□□□ -1.58
VBA1YMR088C YPT53P36019 220 aa5.21□□□□□ -1.58
VBA1YMR088C EXO5P38289 585 aa5.21□□□□□ -1.58
VBA1YMR088C ERV15P38312 142 aa5.21□□□□□ -1.58
VBA1YMR088C YPT31P38555 223 aaKnown RBP5.21□□□□□ -1.58
VBA1YMR088C PGD1P40356 397 aa5.21□□□□□ -1.58
VBA1YMR088C PSF2P40359 213 aa5.21□□□□□ -1.58
VBA1YMR088C EFM3P47163 339 aa5.21□□□□□ -1.58
VBA1YMR088C GND2P53319 492 aa5.21□□□□□ -1.58
VBA1YMR088C YPL062WQ02781 134 aa5.21□□□□□ -1.58
VBA1YMR088C SMP3Q04174 516 aa5.21□□□□□ -1.58
VBA1YMR088C HPF1Q05164 967 aa5.21□□□□□ -1.58
VBA1YMR088C FMP25Q08023 583 aa5.21□□□□□ -1.58
VBA1YMR088C YOL159C-AQ3E769 90 aa5.21□□□□□ -1.58
VBA1YMR088C NAR1P23503 491 aaKnown RBP5.2□□□□□ -1.58
VBA1YMR088C RPL24BP24000 155 aaKnown RBP5.2□□□□□ -1.58
VBA1YMR088C ERG6P25087 383 aaKnown RBP5.2□□□□□ -1.58
VBA1YMR088C POF1P25576 258 aa5.2□□□□□ -1.58
VBA1YMR088C PEX4P29340 183 aa5.2□□□□□ -1.58
VBA1YMR088C CYS3P31373 394 aaKnown RBP5.2□□□□□ -1.58
VBA1YMR088C MKK2P32491 506 aa5.2□□□□□ -1.58
VBA1YMR088C RML2P32611 393 aa5.2□□□□□ -1.58
VBA1YMR088C UGX2P32772 223 aa5.2□□□□□ -1.58
VBA1YMR088C UGP1P32861 499 aaKnown RBP5.2□□□□□ -1.58
VBA1YMR088C ECT1P33412 323 aa5.2□□□□□ -1.58
VBA1YMR088C MAC1P35192 417 aa5.2□□□□□ -1.58
VBA1YMR088C YNK1P36010 153 aaKnown RBP5.2□□□□□ -1.58
VBA1YMR088C TAT1P38085 619 aa5.2□□□□□ -1.58
VBA1YMR088C APN2P38207 520 aa5.2□□□□□ -1.58
VBA1YMR088C TCM62P38228 572 aaKnown RBP5.2□□□□□ -1.58
VBA1YMR088C RPF1P38805 295 aaKnown RBP5.2□□□□□ -1.58
VBA1YMR088C SMF1P38925 575 aa5.2□□□□□ -1.58
VBA1YMR088C PLB1P39105 664 aa5.2□□□□□ -1.58
VBA1YMR088C DHH1P39517 506 aaKnown RBP5.2□□□□□ -1.58
VBA1YMR088C BAP3P41815 604 aa5.2□□□□□ -1.58
VBA1YMR088C YGL235WP53071 178 aa5.2□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 21.1 ms