RNA–Protein interactions for RNA: YML112W

CTK3, Transcript of Gamma subunit of C-terminal domain kinase I, yeastyeast

Gene CTK3, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK3YML112W CYM1P32898 989 aa1.9□□□□□ -2.11
CTK3YML112W YBL028CP38202 106 aa1.9□□□□□ -2.11
CTK3YML112W MNL1P38888 796 aa1.9□□□□□ -2.11
CTK3YML112W ASN2P49090 572 aaKnown RBP1.9□□□□□ -2.11
CTK3YML112W HST4P53688 370 aa1.9□□□□□ -2.11
CTK3YML112W MRX8Q05473 314 aa1.9□□□□□ -2.11
CTK3YML112W GAS2Q06135 555 aa1.9□□□□□ -2.11
CTK3YML112W YOR376WQ08900 122 aa1.9□□□□□ -2.11
CTK3YML112W DDC1Q08949 612 aa1.9□□□□□ -2.11
CTK3YML112W GPM3Q12326 303 aa1.9□□□□□ -2.11
CTK3YML112W STE2D6VTK4 431 aa1.89□□□□□ -2.11
CTK3YML112W SPS19P32573 292 aaKnown RBP1.89□□□□□ -2.11
CTK3YML112W PEX5P35056 612 aa1.89□□□□□ -2.11
CTK3YML112W YHR182WP38870 785 aa1.89□□□□□ -2.11
CTK3YML112W YJL055WP47044 245 aa1.89□□□□□ -2.11
CTK3YML112W SLT2Q00772 484 aa1.89□□□□□ -2.11
CTK3YML112W NDL1Q06568 189 aa1.89□□□□□ -2.11
CTK3YML112W ATP16Q12165 160 aa1.89□□□□□ -2.11
CTK3YML112W RNA1P11745 407 aaKnown RBP1.88□□□□□ -2.11
CTK3YML112W UNG1P12887 359 aa1.88□□□□□ -2.11
CTK3YML112W RRP7P25368 297 aaPredicted RBP1.88□□□□□ -2.11
CTK3YML112W SSE1P32589 693 aaKnown RBP1.88□□□□□ -2.11
CTK3YML112W YKR015CP36111 568 aa1.88□□□□□ -2.11
CTK3YML112W SHE3P38272 425 aaKnown RBP1.88□□□□□ -2.11
CTK3YML112W BIO3P50277 480 aa1.88□□□□□ -2.11
CTK3YML112W VPS9P54787 451 aa1.88□□□□□ -2.11
CTK3YML112W RMI1Q02685 241 aa1.88□□□□□ -2.11
CTK3YML112W SHS1Q07657 551 aa1.88□□□□□ -2.11
CTK3YML112W SPE3Q12074 293 aaKnown RBP1.88□□□□□ -2.11
CTK3YML112W CKA2P19454 339 aa1.87□□□□□ -2.11
CTK3YML112W RRT13P40042 185 aa1.87□□□□□ -2.11
CTK3YML112W STB1P42845 420 aa1.87□□□□□ -2.11
CTK3YML112W CTK3P46963 296 aaPredicted RBP1.87□□□□□ -2.11
CTK3YML112W CPR7P47103 393 aa1.87□□□□□ -2.11
CTK3YML112W DIA1P54005 336 aa1.87□□□□□ -2.11
CTK3YML112W MRX11Q03079 207 aa1.87□□□□□ -2.11
CTK3YML112W GAT3Q07928 141 aa1.87□□□□□ -2.11
CTK3YML112W APC2Q12440 853 aa1.87□□□□□ -2.11
CTK3YML112W RPL23AP0CX41 137 aaKnown RBP1.86□□□□□ -2.11
CTK3YML112W RPL23BP0CX42 137 aaKnown RBP1.86□□□□□ -2.11
CTK3YML112W RAD23P32628 398 aaKnown RBP1.86□□□□□ -2.11
CTK3YML112W GDT1P38301 280 aaPredicted RBP1.86□□□□□ -2.11
CTK3YML112W RCK2P38623 610 aa1.86□□□□□ -2.11
CTK3YML112W AIM23P47015 356 aa1.86□□□□□ -2.11
CTK3YML112W CDH1P53197 566 aa1.86□□□□□ -2.11
CTK3YML112W YGR015CP53208 328 aa1.86□□□□□ -2.11
CTK3YML112W MEH1Q02205 184 aa1.86□□□□□ -2.11
CTK3YML112W IPK1Q06667 281 aa1.86□□□□□ -2.11
CTK3YML112W NOP6Q07623 225 aaKnown RBP1.86□□□□□ -2.11
CTK3YML112W RPN5Q12250 445 aaKnown RBP1.86□□□□□ -2.11
CTK3YML112W AUS1Q08409 1394 aa1.85□□□□□ -2.11
CTK3YML112W FUS3P16892 353 aaKnown RBP1.85□□□□□ -2.11
CTK3YML112W MIR1P23641 311 aaKnown RBP1.85□□□□□ -2.11
CTK3YML112W EFB1P32471 206 aaKnown RBP1.85□□□□□ -2.11
CTK3YML112W AGA2P32781 87 aa1.85□□□□□ -2.11
CTK3YML112W SHE1P38200 338 aa1.85□□□□□ -2.11
CTK3YML112W SPP381P38282 291 aaPredicted RBP1.85□□□□□ -2.11
CTK3YML112W TRR2P38816 342 aa1.85□□□□□ -2.11
CTK3YML112W YJR054WP47114 497 aa1.85□□□□□ -2.11
CTK3YML112W YML6P51998 286 aa1.85□□□□□ -2.11
CTK3YML112W YPR096CO13587 100 aa1.84□□□□□ -2.11
CTK3YML112W RPL6BP05739 176 aaKnown RBP1.84□□□□□ -2.11
CTK3YML112W VMA8P32610 256 aaKnown RBP1.84□□□□□ -2.11
CTK3YML112W AST1P35183 429 aa1.84□□□□□ -2.11
CTK3YML112W YKL071WP36086 256 aa1.84□□□□□ -2.11
CTK3YML112W DBP7P36120 742 aaKnown RBP1.84□□□□□ -2.11
CTK3YML112W LYS12P40495 371 aaKnown RBP1.84□□□□□ -2.11
CTK3YML112W SNL1P40548 159 aa1.84□□□□□ -2.11
CTK3YML112W HIT1P46973 164 aa1.84□□□□□ -2.11
CTK3YML112W YJR030CP47101 745 aa1.84□□□□□ -2.11
CTK3YML112W MPS2P53159 387 aa1.84□□□□□ -2.11
CTK3YML112W RPN14P53196 417 aa1.84□□□□□ -2.11
CTK3YML112W RPL6AQ02326 176 aaKnown RBP1.84□□□□□ -2.11
CTK3YML112W RPL1AP0CX43 217 aaKnown RBP1.83□□□□□ -2.12
CTK3YML112W RPL1BP0CX44 217 aaKnown RBP1.83□□□□□ -2.12
CTK3YML112W FRM2P37261 193 aa1.83□□□□□ -2.12
CTK3YML112W EFM1P38732 585 aa1.83□□□□□ -2.12
CTK3YML112W YHR177WP38867 453 aa1.83□□□□□ -2.12
CTK3YML112W GGC1P38988 300 aa1.83□□□□□ -2.12
CTK3YML112W YNL320WP42840 284 aa1.83□□□□□ -2.12
CTK3YML112W EPL1P43572 832 aa1.83□□□□□ -2.12
CTK3YML112W ZRG17P53735 605 aa1.83□□□□□ -2.12
CTK3YML112W VTI1Q04338 217 aa1.83□□□□□ -2.12
CTK3YML112W YLH47Q06493 454 aa1.83□□□□□ -2.12
CTK3YML112W YAL067W-AQ8TGK6 75 aa1.83□□□□□ -2.12
CTK3YML112W YOR338WQ99326 363 aa1.83□□□□□ -2.12
CTK3YML112W UBA3Q99344 299 aa1.83□□□□□ -2.12
CTK3YML112W BGL2P15703 313 aaKnown RBP1.82□□□□□ -2.12
CTK3YML112W URA10P30402 227 aa1.82□□□□□ -2.12
CTK3YML112W PMT2P31382 759 aa1.82□□□□□ -2.12
CTK3YML112W SKG6P32900 734 aaPredicted RBP1.82□□□□□ -2.12
CTK3YML112W PTK1P36002 662 aaPredicted RBP1.82□□□□□ -2.12
CTK3YML112W PCH2P38126 564 aa1.82□□□□□ -2.12
CTK3YML112W GDI1P39958 451 aaKnown RBP1.82□□□□□ -2.12
CTK3YML112W LCB2P40970 561 aa1.82□□□□□ -2.12
CTK3YML112W MOB2P43563 287 aa1.82□□□□□ -2.12
CTK3YML112W SED5Q01590 340 aa1.82□□□□□ -2.12
CTK3YML112W INP2Q03824 705 aa1.82□□□□□ -2.12
CTK3YML112W PEX27Q08580 376 aa1.82□□□□□ -2.12
CTK3YML112W MSK1P32048 576 aa1.81□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 27.6 ms