RNA–Protein interactions for RNA: YLR229C

CDC42, Transcript of Small rho-like GTPase, yeast

Gene CDC42, Length 576 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC42	YLR229C	DBP8	P38719	431 aa		4.16	□□□□□ -1.74
CDC42	YLR229C	YHK8	P38776	514 aa		4.16	□□□□□ -1.74
CDC42	YLR229C	PCL5	P38794	229 aa		4.16	□□□□□ -1.74
CDC42	YLR229C	UBA4	P38820	440 aa		4.16	□□□□□ -1.74
CDC42	YLR229C	LSM12	P38828	187 aa	Known RBP	4.16	□□□□□ -1.74
CDC42	YLR229C	MNN9	P39107	395 aa	Known RBP	4.16	□□□□□ -1.74
CDC42	YLR229C	TIM17	P39515	158 aa		4.16	□□□□□ -1.74
CDC42	YLR229C	MOB1	P40484	314 aa		4.16	□□□□□ -1.74
CDC42	YLR229C	PTR3	P43606	678 aa		4.16	□□□□□ -1.74
CDC42	YLR229C	MUP1	P50276	574 aa		4.16	□□□□□ -1.74
CDC42	YLR229C	PHO23	P50947	330 aa		4.16	□□□□□ -1.74
CDC42	YLR229C	PYK2	P52489	506 aa	Known RBP	4.16	□□□□□ -1.74
CDC42	YLR229C	VEL1	P53058	206 aa		4.16	□□□□□ -1.74
CDC42	YLR229C	EMC4	P53073	190 aa		4.16	□□□□□ -1.74
CDC42	YLR229C	FLC3	P53121	802 aa		4.16	□□□□□ -1.74
CDC42	YLR229C	CGR1	P53188	120 aa		4.16	□□□□□ -1.74
CDC42	YLR229C	YGR168C	P53293	376 aa		4.16	□□□□□ -1.74
CDC42	YLR229C	TEX1	P53851	422 aa	Known RBP	4.16	□□□□□ -1.74
CDC42	YLR229C	IDP3	P53982	420 aa	Known RBP	4.16	□□□□□ -1.74
CDC42	YLR229C	MAK3	Q03503	176 aa		4.16	□□□□□ -1.74
CDC42	YLR229C	TDA1	Q03533	586 aa		4.16	□□□□□ -1.74
CDC42	YLR229C	YMR010W	Q03687	405 aa		4.16	□□□□□ -1.74
CDC42	YLR229C	CCE1	Q03702	353 aa		4.16	□□□□□ -1.74
CDC42	YLR229C	YHC1	Q05900	231 aa	Known RBP	4.16	□□□□□ -1.74
CDC42	YLR229C	RAD34	Q06665	692 aa		4.16	□□□□□ -1.74
CDC42	YLR229C	HBT1	Q07653	1046 aa	Known RBP	4.16	□□□□□ -1.74
CDC42	YLR229C	YOL131W	Q08270	108 aa		4.16	□□□□□ -1.74
CDC42	YLR229C	SNU23	Q12368	194 aa	Predicted RBP	4.16	□□□□□ -1.74
CDC42	YLR229C	SFG1	Q12507	346 aa		4.16	□□□□□ -1.74
CDC42	YLR229C	RPS21B	Q3E754	87 aa	Known RBP	4.16	□□□□□ -1.74
CDC42	YLR229C	YKL018C-A	Q3E7A7	99 aa		4.16	□□□□□ -1.74
CDC42	YLR229C	RPS17A	P02407	136 aa	Known RBP	4.15	□□□□□ -1.75
CDC42	YLR229C	GCN4	P03069	281 aa		4.15	□□□□□ -1.75
CDC42	YLR229C	SIR3	P06701	978 aa		4.15	□□□□□ -1.75
CDC42	YLR229C	STE3	P06783	470 aa		4.15	□□□□□ -1.75
CDC42	YLR229C	CPA1	P07258	411 aa	Known RBP	4.15	□□□□□ -1.75
CDC42	YLR229C	DST1	P07273	309 aa		4.15	□□□□□ -1.75
CDC42	YLR229C	PET494	P07390	489 aa	Predicted RBP	4.15	□□□□□ -1.75
CDC42	YLR229C	DSF1	P0CX08	502 aa		4.15	□□□□□ -1.75
CDC42	YLR229C	YNR073C	P0CX09	502 aa		4.15	□□□□□ -1.75
CDC42	YLR229C	GAL3	P13045	520 aa		4.15	□□□□□ -1.75
CDC42	YLR229C	RPS17B	P14127	136 aa	Known RBP	4.15	□□□□□ -1.75
CDC42	YLR229C	EPT1	P22140	391 aa		4.15	□□□□□ -1.75
CDC42	YLR229C	CPR3	P25719	182 aa		4.15	□□□□□ -1.75
CDC42	YLR229C	CAM1	P29547	415 aa	Known RBP	4.15	□□□□□ -1.75
CDC42	YLR229C	RMA1	P36001	430 aa	Known RBP	4.15	□□□□□ -1.75
CDC42	YLR229C	MRPL3	P36516	390 aa		4.15	□□□□□ -1.75
CDC42	YLR229C	YBR063C	P38083	404 aa		4.15	□□□□□ -1.75
CDC42	YLR229C	BMT2	P38278	337 aa		4.15	□□□□□ -1.75
CDC42	YLR229C	SPO73	P40031	143 aa		4.15	□□□□□ -1.75
CDC42	YLR229C	PCL6	P40038	420 aa		4.15	□□□□□ -1.75
CDC42	YLR229C	GPP2	P40106	250 aa	Known RBP	4.15	□□□□□ -1.75
CDC42	YLR229C	SOK1	P40317	901 aa		4.15	□□□□□ -1.75
CDC42	YLR229C	YKE4	P40544	346 aa		4.15	□□□□□ -1.75
CDC42	YLR229C	ERG10	P41338	398 aa	Known RBP	4.15	□□□□□ -1.75
CDC42	YLR229C	GAB1	P41733	394 aa		4.15	□□□□□ -1.75
CDC42	YLR229C	MEP2	P41948	499 aa		4.15	□□□□□ -1.75
CDC42	YLR229C	NIT2	P47016	307 aa		4.15	□□□□□ -1.75
CDC42	YLR229C	IRC18	P47056	224 aa		4.15	□□□□□ -1.75
CDC42	YLR229C	BIO3	P50277	480 aa		4.15	□□□□□ -1.75
CDC42	YLR229C	TPN1	P53099	579 aa		4.15	□□□□□ -1.75
CDC42	YLR229C	SWC4	P53201	476 aa		4.15	□□□□□ -1.75
CDC42	YLR229C	YGR067C	P53243	804 aa		4.15	□□□□□ -1.75
CDC42	YLR229C	HOL1	P53389	586 aa		4.15	□□□□□ -1.75
CDC42	YLR229C	DBP6	P53734	629 aa	Known RBP	4.15	□□□□□ -1.75
CDC42	YLR229C	ZRG17	P53735	605 aa		4.15	□□□□□ -1.75
CDC42	YLR229C	YNL260C	P53846	198 aa		4.15	□□□□□ -1.75
CDC42	YLR229C	HXT11	P54862	567 aa		4.15	□□□□□ -1.75
CDC42	YLR229C	YPL071C	Q02864	156 aa		4.15	□□□□□ -1.75
CDC42	YLR229C	YMD8	Q03697	442 aa		4.15	□□□□□ -1.75
CDC42	YLR229C	TMN2	Q04562	672 aa		4.15	□□□□□ -1.75
CDC42	YLR229C	COX20	Q04935	205 aa		4.15	□□□□□ -1.75
CDC42	YLR229C	YMR034C	Q05131	434 aa	Predicted RBP	4.15	□□□□□ -1.75
CDC42	YLR229C	YLR283W	Q05867	314 aa		4.15	□□□□□ -1.75
CDC42	YLR229C	RRT8	Q08219	342 aa		4.15	□□□□□ -1.75
CDC42	YLR229C	GSH2	Q08220	491 aa		4.15	□□□□□ -1.75
CDC42	YLR229C	FRE5	Q08908	694 aa		4.15	□□□□□ -1.75
CDC42	YLR229C	MDM32	Q12171	622 aa		4.15	□□□□□ -1.75
CDC42	YLR229C	PST1	Q12355	444 aa		4.15	□□□□□ -1.75
CDC42	YLR229C	WTM1	Q12363	437 aa	Known RBP	4.15	□□□□□ -1.75
CDC42	YLR229C	YDL199C	Q12407	687 aa		4.15	□□□□□ -1.75
CDC42	YLR229C	YPL119C-A	Q3E751	87 aa		4.15	□□□□□ -1.75
CDC42	YLR229C	ARG81	P05085	880 aa		4.14	□□□□□ -1.75
CDC42	YLR229C	RPS21A	P0C0V8	87 aa	Known RBP	4.14	□□□□□ -1.75
CDC42	YLR229C	MRP2	P10663	115 aa	Predicted RBP	4.14	□□□□□ -1.75
CDC42	YLR229C	FRS1	P15624	595 aa	Known RBP	4.14	□□□□□ -1.75
CDC42	YLR229C	GRX2	P17695	143 aa	Known RBP	4.14	□□□□□ -1.75
CDC42	YLR229C	RPF2	P36160	344 aa	Known RBP	4.14	□□□□□ -1.75
CDC42	YLR229C	YCR087C-A	P37263	153 aa		4.14	□□□□□ -1.75
CDC42	YLR229C	MNN2	P38069	597 aa		4.14	□□□□□ -1.75
CDC42	YLR229C	SBE22	P38814	852 aa		4.14	□□□□□ -1.75
CDC42	YLR229C	MIT1	P40002	666 aa		4.14	□□□□□ -1.75
CDC42	YLR229C	GID8	P40208	455 aa		4.14	□□□□□ -1.75
CDC42	YLR229C	YGR210C	P42942	411 aa		4.14	□□□□□ -1.75
CDC42	YLR229C	YFR018C	P43599	363 aa		4.14	□□□□□ -1.75
CDC42	YLR229C	PMT4	P46971	762 aa		4.14	□□□□□ -1.75
CDC42	YLR229C	BIT61	P47041	543 aa		4.14	□□□□□ -1.75
CDC42	YLR229C	UBC12	P52491	188 aa		4.14	□□□□□ -1.75
CDC42	YLR229C	MPS2	P53159	387 aa		4.14	□□□□□ -1.75
CDC42	YLR229C	PRM8	P53174	237 aa		4.14	□□□□□ -1.75

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