RNA–Protein interactions for RNA: YHR027C

RPN1, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN1, Length 2,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN1YHR027C BUD31P25337 157 aaPredicted RBP2.97□□□□□ -1.93
RPN1YHR027C AGP1P25376 633 aa2.97□□□□□ -1.93
RPN1YHR027C PAH1P32567 862 aa2.97□□□□□ -1.93
RPN1YHR027C GPT2P36148 743 aa2.97□□□□□ -1.93
RPN1YHR027C MRPL36P36531 177 aa2.97□□□□□ -1.93
RPN1YHR027C APE3P37302 537 aaKnown RBP2.97□□□□□ -1.93
RPN1YHR027C AFG3P39925 761 aa2.97□□□□□ -1.93
RPN1YHR027C POG1P40473 351 aa2.97□□□□□ -1.93
RPN1YHR027C CIT3P43635 486 aa2.97□□□□□ -1.93
RPN1YHR027C ALY2P47029 1046 aa2.97□□□□□ -1.93
RPN1YHR027C YJR149WP47177 404 aa2.97□□□□□ -1.93
RPN1YHR027C DAN1P47178 298 aa2.97□□□□□ -1.93
RPN1YHR027C HLJ1P48353 224 aa2.97□□□□□ -1.93
RPN1YHR027C CUE4Q04201 117 aaPredicted RBP2.97□□□□□ -1.93
RPN1YHR027C TUM1Q08686 304 aaKnown RBP2.97□□□□□ -1.93
RPN1YHR027C PFK27Q12471 397 aaPredicted RBP2.97□□□□□ -1.93
RPN1YHR027C KCS1Q12494 1050 aa2.97□□□□□ -1.93
RPN1YHR027C GAL4P04386 881 aa2.97□□□□□ -1.93
RPN1YHR027C CAN1P04817 590 aa2.97□□□□□ -1.93
RPN1YHR027C ASP3-2P0CX77 362 aa2.97□□□□□ -1.93
RPN1YHR027C ASP3-3P0CX78 362 aa2.97□□□□□ -1.93
RPN1YHR027C ASP3-4P0CX79 362 aa2.97□□□□□ -1.93
RPN1YHR027C ASP3-1P0CZ17 362 aa2.97□□□□□ -1.93
RPN1YHR027C RPB3P16370 318 aaKnown RBP2.97□□□□□ -1.93
RPN1YHR027C PRP2P20095 876 aaPredicted RBP2.97□□□□□ -1.93
RPN1YHR027C BUB2P26448 306 aaPredicted RBP2.97□□□□□ -1.93
RPN1YHR027C PHO91P27514 894 aa2.97□□□□□ -1.93
RPN1YHR027C HMX1P32339 317 aa2.97□□□□□ -1.93
RPN1YHR027C GCD11P32481 527 aaKnown RBP2.97□□□□□ -1.93
RPN1YHR027C NGR1P32831 672 aaKnown RBP2.97□□□□□ -1.93
RPN1YHR027C PPG1P32838 368 aa2.97□□□□□ -1.93
RPN1YHR027C SFC1P33303 322 aa2.97□□□□□ -1.93
RPN1YHR027C TUL1P36096 758 aa2.97□□□□□ -1.93
RPN1YHR027C YKR075CP36155 307 aa2.97□□□□□ -1.93
RPN1YHR027C SDH4P37298 181 aa2.97□□□□□ -1.93
RPN1YHR027C SKP2P42843 763 aa2.97□□□□□ -1.93
RPN1YHR027C PTR3P43606 678 aa2.97□□□□□ -1.93
RPN1YHR027C DPB11P47027 764 aaPredicted RBP2.97□□□□□ -1.93
RPN1YHR027C YJR012CP47087 207 aa2.97□□□□□ -1.93
RPN1YHR027C YAE1P47118 141 aaPredicted RBP2.97□□□□□ -1.93
RPN1YHR027C GCV1P48015 400 aa2.97□□□□□ -1.93
RPN1YHR027C NUP57P48837 541 aa2.97□□□□□ -1.93
RPN1YHR027C ROG1P53118 685 aa2.97□□□□□ -1.93
RPN1YHR027C YGR017WP53210 297 aa2.97□□□□□ -1.93
RPN1YHR027C SSU72P53538 206 aaPredicted RBP2.97□□□□□ -1.93
RPN1YHR027C KIN4Q01919 800 aa2.97□□□□□ -1.93
RPN1YHR027C ROD1Q02805 837 aa2.97□□□□□ -1.93
RPN1YHR027C PEX12Q04370 399 aa2.97□□□□□ -1.93
RPN1YHR027C GIM5Q04493 163 aa2.97□□□□□ -1.93
RPN1YHR027C AIM6Q07716 390 aa2.97□□□□□ -1.93
RPN1YHR027C INP53Q12271 1107 aa2.97□□□□□ -1.93
RPN1YHR027C YDL199CQ12407 687 aa2.97□□□□□ -1.93
RPN1YHR027C PCD1Q12524 340 aa2.97□□□□□ -1.93
RPN1YHR027C ECM29P38737 1868 aa2.96□□□□□ -1.93
RPN1YHR027C SUC2P00724 532 aa2.96□□□□□ -1.94
RPN1YHR027C HAP2P06774 265 aa2.96□□□□□ -1.94
RPN1YHR027C DST1P07273 309 aa2.96□□□□□ -1.94
RPN1YHR027C ATP5P09457 212 aa2.96□□□□□ -1.94
RPN1YHR027C NHP6BP11633 99 aaKnown RBP2.96□□□□□ -1.94
RPN1YHR027C GCY1P14065 312 aaKnown RBP RIP-Chip data2.96□□□□□ -1.94not detected
RPN1YHR027C CPR1P14832 162 aaKnown RBP2.96□□□□□ -1.94
RPN1YHR027C MDH1P17505 334 aaKnown RBP RIP-Chip data2.96□□□□□ -1.94not detected
RPN1YHR027C SEC59P20048 519 aa2.96□□□□□ -1.94
RPN1YHR027C CLB6P32943 380 aa2.96□□□□□ -1.94
RPN1YHR027C TGL1P34163 548 aa2.96□□□□□ -1.94
RPN1YHR027C AIM3P38266 947 aaKnown RBP2.96□□□□□ -1.94
RPN1YHR027C HSL7P38274 827 aa2.96□□□□□ -1.94
RPN1YHR027C EHT1P38295 451 aa2.96□□□□□ -1.94
RPN1YHR027C YPT31P38555 223 aaKnown RBP2.96□□□□□ -1.94
RPN1YHR027C YAR028WP39548 234 aa2.96□□□□□ -1.94
RPN1YHR027C GET2P40056 285 aa2.96□□□□□ -1.94
RPN1YHR027C ARG2P40360 574 aa2.96□□□□□ -1.94
RPN1YHR027C LSB3P43603 459 aaKnown RBP2.96□□□□□ -1.94
RPN1YHR027C MRX6P48564 524 aa2.96□□□□□ -1.94
RPN1YHR027C PUS4P48567 403 aaKnown RBP2.96□□□□□ -1.94
RPN1YHR027C ALT2P52892 507 aa2.96□□□□□ -1.94
RPN1YHR027C GUP1P53154 560 aa2.96□□□□□ -1.94
RPN1YHR027C NMA111P53920 997 aa2.96□□□□□ -1.94
RPN1YHR027C SAE3P89114 91 aa2.96□□□□□ -1.94
RPN1YHR027C STD1Q02794 444 aa2.96□□□□□ -1.94
RPN1YHR027C RIM13Q03792 727 aa2.96□□□□□ -1.94
RPN1YHR027C YDR124WQ04608 324 aa2.96□□□□□ -1.94
RPN1YHR027C THI13Q07748 340 aa2.96□□□□□ -1.94
RPN1YHR027C SUS1Q6WNK7 96 aa2.96□□□□□ -1.94
RPN1YHR027C MEX67Q99257 599 aaKnown RBP2.96□□□□□ -1.94
RPN1YHR027C HXK2P04807 486 aaKnown RBP2.96□□□□□ -1.94
RPN1YHR027C CDC7P06243 507 aa2.96□□□□□ -1.94
RPN1YHR027C NAM2P11325 894 aa2.96□□□□□ -1.94
RPN1YHR027C ARG8P18544 423 aa2.96□□□□□ -1.94
RPN1YHR027C ZRC1P20107 442 aa2.96□□□□□ -1.94
RPN1YHR027C PRP45P28004 379 aaPredicted RBP2.96□□□□□ -1.94
RPN1YHR027C EHD3P28817 500 aa2.96□□□□□ -1.94
RPN1YHR027C YEF1P32622 495 aa2.96□□□□□ -1.94
RPN1YHR027C SKG6P32900 734 aaPredicted RBP2.96□□□□□ -1.94
RPN1YHR027C MOT2P34909 587 aaKnown RBP2.96□□□□□ -1.94
RPN1YHR027C MRPL4P36517 319 aa2.96□□□□□ -1.94
RPN1YHR027C FIG1P38224 298 aa2.96□□□□□ -1.94
RPN1YHR027C PEX28P38848 579 aa2.96□□□□□ -1.94
RPN1YHR027C VPS45P38932 577 aa2.96□□□□□ -1.94
RPN1YHR027C MND2P40577 368 aa2.96□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 64.6 ms