RNA–Protein interactions for RNA: YDR049W

VMS1, Transcript of Component of a Cdc48p-complex involved in protein quality control, yeastyeast

Gene VMS1, Length 1,899 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMS1YDR049W COG2P53271 262 aa5.35□□□□□ -1.55
VMS1YDR049W GOR1P53839 350 aa5.35□□□□□ -1.55
VMS1YDR049W RMI1Q02685 241 aa5.35□□□□□ -1.55
VMS1YDR049W NRG1Q03125 231 aa5.35□□□□□ -1.55
VMS1YDR049W OST6Q03723 332 aa5.35□□□□□ -1.55
VMS1YDR049W BER1Q06688 274 aaKnown RBP5.35□□□□□ -1.55
VMS1YDR049W TMS1Q12116 473 aa5.35□□□□□ -1.55
VMS1YDR049W PDR10P51533 1564 aa5.35□□□□□ -1.55
VMS1YDR049W TY1B-BRQ12193 1756 aa5.35□□□□□ -1.55
VMS1YDR049W TY1B-GR3Q12316 1755 aa5.35□□□□□ -1.55
VMS1YDR049W TY1B-ORQ92393 1755 aa5.35□□□□□ -1.55
VMS1YDR049W RAV1P47104 1357 aa5.35□□□□□ -1.55
VMS1YDR049W RAD50P12753 1312 aa5.35□□□□□ -1.55
VMS1YDR049W PUT1P09368 476 aa5.34□□□□□ -1.55
VMS1YDR049W ATP10P18496 279 aa5.34□□□□□ -1.55
VMS1YDR049W FPS1P23900 669 aa5.34□□□□□ -1.55
VMS1YDR049W UTP11P34247 250 aaPredicted RBP5.34□□□□□ -1.55
VMS1YDR049W SOR1P35497 357 aaKnown RBP5.34□□□□□ -1.55
VMS1YDR049W DER1P38307 211 aa5.34□□□□□ -1.55
VMS1YDR049W VBA2P38358 474 aaKnown RBP5.34□□□□□ -1.55
VMS1YDR049W STP2P38704 541 aa5.34□□□□□ -1.55
VMS1YDR049W ALG8P40351 577 aa5.34□□□□□ -1.55
VMS1YDR049W YPS6P40583 537 aa5.34□□□□□ -1.55
VMS1YDR049W PRM10P42946 383 aa5.34□□□□□ -1.55
VMS1YDR049W YFR020WP43600 232 aa5.34□□□□□ -1.55
VMS1YDR049W SBH2P52871 88 aa5.34□□□□□ -1.55
VMS1YDR049W NIF3P53081 288 aa5.34□□□□□ -1.55
VMS1YDR049W GND2P53319 492 aa5.34□□□□□ -1.55
VMS1YDR049W TEX1P53851 422 aaKnown RBP5.34□□□□□ -1.55
VMS1YDR049W YLR460CP54007 376 aa5.34□□□□□ -1.55
VMS1YDR049W SIZ1Q04195 904 aa5.34□□□□□ -1.55
VMS1YDR049W WHI4Q07655 649 aaKnown RBP5.34□□□□□ -1.55
VMS1YDR049W SOR2Q07786 357 aa5.34□□□□□ -1.55
VMS1YDR049W YPL150WQ12152 901 aa5.34□□□□□ -1.55
VMS1YDR049W RNH203Q12338 110 aa5.34□□□□□ -1.55
VMS1YDR049W RAD57P25301 460 aa5.34□□□□□ -1.55
VMS1YDR049W RAD24P32641 659 aa5.34□□□□□ -1.55
VMS1YDR049W LOS1P33418 1100 aaPredicted RBP5.34□□□□□ -1.55
VMS1YDR049W YKL063CP35725 167 aa5.34□□□□□ -1.55
VMS1YDR049W TSC10P38342 320 aa5.34□□□□□ -1.55
VMS1YDR049W COX15P40086 486 aa5.34□□□□□ -1.55
VMS1YDR049W MDV1P47025 714 aa5.34□□□□□ -1.55
VMS1YDR049W YPT32P51996 222 aaKnown RBP5.34□□□□□ -1.55
VMS1YDR049W YGL235WP53071 178 aa5.34□□□□□ -1.55
VMS1YDR049W YDR109CQ04585 715 aa5.34□□□□□ -1.55
VMS1YDR049W YOL159CQ08300 171 aa5.34□□□□□ -1.55
VMS1YDR049W YOR289WQ12012 251 aaPredicted RBP5.34□□□□□ -1.55
VMS1YDR049W FRE7Q12333 620 aa5.34□□□□□ -1.55
VMS1YDR049W ARP6Q12509 438 aa5.34□□□□□ -1.55
VMS1YDR049W CHO2P05374 869 aaKnown RBP5.33□□□□□ -1.56
VMS1YDR049W KGD2P19262 463 aaPredicted RBP5.33□□□□□ -1.56
VMS1YDR049W VMA5P31412 392 aaKnown RBP5.33□□□□□ -1.56
VMS1YDR049W CYS4P32582 507 aaKnown RBP5.33□□□□□ -1.56
VMS1YDR049W STE14P32584 239 aa5.33□□□□□ -1.56
VMS1YDR049W TCA17P32613 152 aa5.33□□□□□ -1.56
VMS1YDR049W TMT1P32643 299 aa5.33□□□□□ -1.56
VMS1YDR049W PHO86P46956 311 aa5.33□□□□□ -1.56
VMS1YDR049W SFH5P47008 294 aa5.33□□□□□ -1.56
VMS1YDR049W FYV6P53913 173 aa5.33□□□□□ -1.56
VMS1YDR049W RVB1Q03940 463 aaKnown RBP5.33□□□□□ -1.56
VMS1YDR049W SMP3Q04174 516 aa5.33□□□□□ -1.56
VMS1YDR049W PLB3Q08108 686 aa5.33□□□□□ -1.56
VMS1YDR049W SAM4Q08985 325 aaKnown RBP5.33□□□□□ -1.56
VMS1YDR049W TY1B-HO13535 1793 aa5.33□□□□□ -1.56
VMS1YDR049W TY1B-DR5P0C2I2 1755 aa5.33□□□□□ -1.56
VMS1YDR049W TY1B-DR6P0C2I3 1755 aa5.33□□□□□ -1.56
VMS1YDR049W TY1B-LR2P0C2I5 1755 aa5.33□□□□□ -1.56
VMS1YDR049W TY1B-LR3P0C2I6 1755 aaKnown RBP5.33□□□□□ -1.56
VMS1YDR049W TY1B-PR1P0C2I9 1755 aaKnown RBP5.33□□□□□ -1.56
VMS1YDR049W TY1B-PR2P0C2J0 1756 aa5.33□□□□□ -1.56
VMS1YDR049W TY1B-PR3P0C2J1 1755 aaKnown RBP5.33□□□□□ -1.56
VMS1YDR049W TY1B-JR1P47098 1755 aa5.33□□□□□ -1.56
VMS1YDR049W TY1B-ML2Q03434 1755 aaKnown RBP5.33□□□□□ -1.56
VMS1YDR049W TY1B-ER1Q03612 1755 aa5.33□□□□□ -1.56
VMS1YDR049W TY1B-ML1Q04711 1755 aaKnown RBP5.33□□□□□ -1.56
VMS1YDR049W TY1B-GR2Q12269 1755 aa5.33□□□□□ -1.56
VMS1YDR049W TY1B-OLQ12273 1755 aa5.33□□□□□ -1.56
VMS1YDR049W TY1B-PLQ12414 1755 aaKnown RBP5.33□□□□□ -1.56
VMS1YDR049W RPP0P05317 312 aaKnown RBP5.32□□□□□ -1.56
VMS1YDR049W ASP3-2P0CX77 362 aa5.32□□□□□ -1.56
VMS1YDR049W ASP3-3P0CX78 362 aa5.32□□□□□ -1.56
VMS1YDR049W ASP3-4P0CX79 362 aa5.32□□□□□ -1.56
VMS1YDR049W ASP3-1P0CZ17 362 aa5.32□□□□□ -1.56
VMS1YDR049W CNE1P27825 502 aa5.32□□□□□ -1.56
VMS1YDR049W TRR1P29509 319 aaKnown RBP5.32□□□□□ -1.56
VMS1YDR049W CLG1P35190 452 aa5.32□□□□□ -1.56
VMS1YDR049W RIB5P38145 238 aa5.32□□□□□ -1.56
VMS1YDR049W ATG7P38862 630 aa5.32□□□□□ -1.56
VMS1YDR049W SLM1P40485 686 aa5.32□□□□□ -1.56
VMS1YDR049W PCI8P40512 444 aa5.32□□□□□ -1.56
VMS1YDR049W YGR210CP42942 411 aa5.32□□□□□ -1.56
VMS1YDR049W COS4P43542 379 aa5.32□□□□□ -1.56
VMS1YDR049W NAS6P50086 228 aa5.32□□□□□ -1.56
VMS1YDR049W SEH1P53011 349 aaKnown RBP5.32□□□□□ -1.56
VMS1YDR049W YTP1P53584 459 aa5.32□□□□□ -1.56
VMS1YDR049W ATG4P53867 494 aa5.32□□□□□ -1.56
VMS1YDR049W ASI1P54074 624 aa5.32□□□□□ -1.56
VMS1YDR049W YPL068CQ02749 293 aa5.32□□□□□ -1.56
VMS1YDR049W DIG1Q03063 452 aaKnown RBP5.32□□□□□ -1.56
VMS1YDR049W CTK1Q03957 528 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 94 ms