RNA–Protein interactions for RNA: YDL165W

CDC36, Transcript of Component of the CCR4-NOT core complex, yeastyeast

Gene CDC36, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC36YDL165W ATG22P25568 528 aa1.26□□□□□ -2.21
CDC36YDL165W GEX1P25596 615 aa1.26□□□□□ -2.21
CDC36YDL165W YCR101CP25607 182 aa1.26□□□□□ -2.21
CDC36YDL165W ICL1P28240 557 aaPredicted RBP1.26□□□□□ -2.21
CDC36YDL165W ATP7P30902 174 aa1.26□□□□□ -2.21
CDC36YDL165W DBF4P32325 704 aa1.26□□□□□ -2.21
CDC36YDL165W NDI1P32340 513 aa1.26□□□□□ -2.21
CDC36YDL165W ATP11P32453 318 aa1.26□□□□□ -2.21
CDC36YDL165W DPH2P32461 534 aa1.26□□□□□ -2.21
CDC36YDL165W FRE1P32791 686 aa1.26□□□□□ -2.21
CDC36YDL165W GYP6P32806 458 aa1.26□□□□□ -2.21
CDC36YDL165W SUI1P32911 108 aaKnown RBP1.26□□□□□ -2.21
CDC36YDL165W MSN4P33749 630 aa1.26□□□□□ -2.21
CDC36YDL165W PRX1P34227 261 aaKnown RBP1.26□□□□□ -2.21
CDC36YDL165W TPO5P36029 618 aa1.26□□□□□ -2.21
CDC36YDL165W SNU114P36048 1008 aaKnown RBP1.26□□□□□ -2.21
CDC36YDL165W ANR2P36090 516 aaPredicted RBP1.26□□□□□ -2.21
CDC36YDL165W LAS1P36146 502 aaPredicted RBP1.26□□□□□ -2.21
CDC36YDL165W HMT1P38074 348 aa1.26□□□□□ -2.21
CDC36YDL165W ECM31P38122 312 aa1.26□□□□□ -2.21
CDC36YDL165W DUG2P38149 878 aa1.26□□□□□ -2.21
CDC36YDL165W MMS4P38257 691 aa1.26□□□□□ -2.21
CDC36YDL165W ATG7P38862 630 aa1.26□□□□□ -2.21
CDC36YDL165W YHR182WP38870 785 aa1.26□□□□□ -2.21
CDC36YDL165W YDR089WP38966 869 aa1.26□□□□□ -2.21
CDC36YDL165W FHL1P39521 936 aa1.26□□□□□ -2.21
CDC36YDL165W AST2P39945 430 aaKnown RBP1.26□□□□□ -2.21
CDC36YDL165W RGI1P40043 161 aaPredicted RBP1.26□□□□□ -2.21
CDC36YDL165W MMF1P40185 145 aaKnown RBP1.26□□□□□ -2.21
CDC36YDL165W DOT5P40553 215 aa1.26□□□□□ -2.21
CDC36YDL165W GTT1P40582 234 aa1.26□□□□□ -2.21
CDC36YDL165W VMA13P41807 478 aaKnown RBP1.26□□□□□ -2.21
CDC36YDL165W YFL067WP43537 175 aa1.26□□□□□ -2.21
CDC36YDL165W RPE1P46969 238 aa1.26□□□□□ -2.21
CDC36YDL165W YJR056CP47115 236 aa1.26□□□□□ -2.21
CDC36YDL165W YJR079WP47126 109 aa1.26□□□□□ -2.21
CDC36YDL165W AAD10P47182 288 aa1.26□□□□□ -2.21
CDC36YDL165W MRX6P48564 524 aa1.26□□□□□ -2.21
CDC36YDL165W RPL4BP49626 362 aaKnown RBP1.26□□□□□ -2.21
CDC36YDL165W DIA3P52290 468 aa1.26□□□□□ -2.21
CDC36YDL165W NBP1P52919 319 aaPredicted RBP1.26□□□□□ -2.21
CDC36YDL165W ART5P53244 586 aaKnown RBP1.26□□□□□ -2.21
CDC36YDL165W SLX9P53251 210 aaPredicted RBP1.26□□□□□ -2.21
CDC36YDL165W VOA1P53262 265 aa1.26□□□□□ -2.21
CDC36YDL165W RCF2P53721 224 aa1.26□□□□□ -2.21
CDC36YDL165W DUG3P53871 357 aa1.26□□□□□ -2.21
CDC36YDL165W EOS1P53938 366 aa1.26□□□□□ -2.21
CDC36YDL165W DID2P69771 204 aa1.26□□□□□ -2.21
CDC36YDL165W RPT6Q01939 405 aaKnown RBP1.26□□□□□ -2.21
CDC36YDL165W TOF2Q02208 771 aa1.26□□□□□ -2.21
CDC36YDL165W PEX25Q02969 394 aa1.26□□□□□ -2.21
CDC36YDL165W MSC1Q03104 513 aa1.26□□□□□ -2.21
CDC36YDL165W HER2Q03557 464 aa1.26□□□□□ -2.21
CDC36YDL165W RUB1Q03919 77 aa1.26□□□□□ -2.21
CDC36YDL165W ATC1Q04005 294 aa1.26□□□□□ -2.21
CDC36YDL165W PEX12Q04370 399 aa1.26□□□□□ -2.21
CDC36YDL165W ECM18Q04623 453 aa1.26□□□□□ -2.21
CDC36YDL165W GTO3Q04806 366 aa1.26□□□□□ -2.21
CDC36YDL165W COQ9Q05779 260 aa1.26□□□□□ -2.21
CDC36YDL165W VPS38Q05919 439 aa1.26□□□□□ -2.21
CDC36YDL165W YLR173WQ06247 608 aa1.26□□□□□ -2.21
CDC36YDL165W DIB1Q06819 143 aaPredicted RBP1.26□□□□□ -2.21
CDC36YDL165W YDL057WQ07379 328 aa1.26□□□□□ -2.21
CDC36YDL165W YLL007CQ07799 665 aa1.26□□□□□ -2.21
CDC36YDL165W SGT1Q08446 395 aa1.26□□□□□ -2.21
CDC36YDL165W SKI7Q08491 747 aaPredicted RBP1.26□□□□□ -2.21
CDC36YDL165W FEX2Q08991 375 aa1.26□□□□□ -2.21
CDC36YDL165W AKR2Q12013 749 aa1.26□□□□□ -2.21
CDC36YDL165W TAF10Q12030 206 aa1.26□□□□□ -2.21
CDC36YDL165W NUS1Q12063 375 aa1.26□□□□□ -2.21
CDC36YDL165W YPR022CQ12139 1133 aa1.26□□□□□ -2.21
CDC36YDL165W NSL1Q12143 216 aa1.26□□□□□ -2.21
CDC36YDL165W RRG1Q12167 365 aaPredicted RBP1.26□□□□□ -2.21
CDC36YDL165W MDY2Q12285 212 aa1.26□□□□□ -2.21
CDC36YDL165W YPS3Q12303 508 aa1.26□□□□□ -2.21
CDC36YDL165W LDB17Q12342 491 aa1.26□□□□□ -2.21
CDC36YDL165W PAA1Q12447 191 aaKnown RBP1.26□□□□□ -2.21
CDC36YDL165W AVL9Q12500 764 aa1.26□□□□□ -2.21
CDC36YDL165W HSH49Q99181 213 aaPredicted RBP1.26□□□□□ -2.21
CDC36YDL165W ISN1Q99312 450 aa1.26□□□□□ -2.21
CDC36YDL165W RAD61Q99359 647 aa1.26□□□□□ -2.21
CDC36YDL165W XRN1P22147 1528 aaKnown RBP1.25□□□□□ -2.21
CDC36YDL165W MMS22Q06164 1454 aa1.25□□□□□ -2.21
CDC36YDL165W GEA1P47102 1408 aaPredicted RBP1.25□□□□□ -2.21
CDC36YDL165W ROM2P51862 1356 aaKnown RBP1.25□□□□□ -2.21
CDC36YDL165W AUS1Q08409 1394 aa1.25□□□□□ -2.21
CDC36YDL165W POM152P39685 1337 aa1.25□□□□□ -2.21
CDC36YDL165W YLR278CQ05854 1341 aa1.25□□□□□ -2.21
CDC36YDL165W SEM1O94742 89 aa1.25□□□□□ -2.21
CDC36YDL165W MF(ALPHA)1P01149 165 aa1.25□□□□□ -2.21
CDC36YDL165W CDC36P06100 191 aaPredicted RBP1.25□□□□□ -2.21
CDC36YDL165W LEU4P06208 619 aaKnown RBP1.25□□□□□ -2.21
CDC36YDL165W HIP1P06775 603 aa1.25□□□□□ -2.21
CDC36YDL165W DST1P07273 309 aa1.25□□□□□ -2.21
CDC36YDL165W PRB1P09232 635 aa1.25□□□□□ -2.21
CDC36YDL165W PET54P10834 293 aa1.25□□□□□ -2.21
CDC36YDL165W NHP6AP11632 93 aaKnown RBP1.25□□□□□ -2.21
CDC36YDL165W SLY1P22213 666 aa1.25□□□□□ -2.21
CDC36YDL165W PRE8P23639 250 aa1.25□□□□□ -2.21
CDC36YDL165W MNE1P24720 663 aa1.25□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 26.8 ms