RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 MAML2Q8IZL2 1156 aaPredicted RBP12.69□□□□□ -0.38
PTP4A1-207ENST00000639568 LRRC43Q8N309 656 aa12.69□□□□□ -0.38
PTP4A1-207ENST00000639568 NME8Q8N427 588 aa12.69□□□□□ -0.38
PTP4A1-207ENST00000639568 PJA1Q8NG27 643 aa12.69□□□□□ -0.38
PTP4A1-207ENST00000639568 GPR152Q8TDT2 470 aa12.69□□□□□ -0.38
PTP4A1-207ENST00000639568 SEPT1Q8WYJ6 367 aa12.69□□□□□ -0.38
PTP4A1-207ENST00000639568 SHDQ96IW2 340 aa12.69□□□□□ -0.38
PTP4A1-207ENST00000639568 ZKSCAN3Q9BRR0 538 aa12.69□□□□□ -0.38
PTP4A1-207ENST00000639568 MYH7BA7E2Y1 1941 aa12.68□□□□□ -0.38
PTP4A1-207ENST00000639568 KIAA1671Q9BY89 1806 aa12.68□□□□□ -0.38
PTP4A1-207ENST00000639568 C9IYK1 514 aa12.68□□□□□ -0.38
PTP4A1-207ENST00000639568 SLC30A4O14863 429 aa12.68□□□□□ -0.38
PTP4A1-207ENST00000639568 TBC1D4O60343 1298 aa12.68□□□□□ -0.38
PTP4A1-207ENST00000639568 MRPS9P82933 396 aaKnown RBP12.68□□□□□ -0.38
PTP4A1-207ENST00000639568 PTPN14Q15678 1187 aa12.68□□□□□ -0.38
PTP4A1-207ENST00000639568 CCDC178Q5BJE1 867 aa12.68□□□□□ -0.38
PTP4A1-207ENST00000639568 VPS53Q5VIR6 699 aa12.68□□□□□ -0.38
PTP4A1-207ENST00000639568 LRRC55Q6ZSA7 311 aa12.68□□□□□ -0.38
PTP4A1-207ENST00000639568 PPFIBP1Q86W92 1011 aa12.68□□□□□ -0.38
PTP4A1-207ENST00000639568 MIER1Q8N108 512 aa12.68□□□□□ -0.38
PTP4A1-207ENST00000639568 VPS52Q8N1B4 723 aa12.68□□□□□ -0.38
PTP4A1-207ENST00000639568 DDX1Q92499 740 aaKnown RBP12.68□□□□□ -0.38
PTP4A1-207ENST00000639568 ESR2Q92731 530 aa12.68□□□□□ -0.38
PTP4A1-207ENST00000639568 STAMQ92783 540 aa12.68□□□□□ -0.38
PTP4A1-207ENST00000639568 NXPE3Q969Y0 559 aa12.68□□□□□ -0.38
PTP4A1-207ENST00000639568 TMEM169Q96HH4 297 aa12.68□□□□□ -0.38
PTP4A1-207ENST00000639568 EPC1Q9H2F5 836 aa12.68□□□□□ -0.38
PTP4A1-207ENST00000639568 ELAC1Q9H777 363 aaKnown RBP12.68□□□□□ -0.38
PTP4A1-207ENST00000639568 ZSCAN32Q9NX65 697 aa12.68□□□□□ -0.38
PTP4A1-207ENST00000639568 RAB23Q9ULC3 237 aa12.68□□□□□ -0.38
PTP4A1-207ENST00000639568 ST3GAL5Q9UNP4 418 aa12.68□□□□□ -0.38
PTP4A1-207ENST00000639568 PCDHA2Q9Y5H9 948 aa12.68□□□□□ -0.38
PTP4A1-207ENST00000639568 SETXQ7Z333 2677 aaKnown RBP12.67□□□□□ -0.38
PTP4A1-207ENST00000639568 KDM3AQ9Y4C1 1321 aa12.67□□□□□ -0.38
PTP4A1-207ENST00000639568 ASPMQ8IZT6 3477 aa12.67□□□□□ -0.38
PTP4A1-207ENST00000639568 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.67□□□□□ -0.38
PTP4A1-207ENST00000639568 ZBTB5O15062 677 aa12.67□□□□□ -0.38
PTP4A1-207ENST00000639568 PCP11498 1178 aaKnown RBP12.67□□□□□ -0.38
PTP4A1-207ENST00000639568 SEMA3FQ13275 785 aa12.67□□□□□ -0.38
PTP4A1-207ENST00000639568 ALX1Q15699 326 aa12.67□□□□□ -0.38
PTP4A1-207ENST00000639568 C15orf39Q6ZRI6 1047 aa12.67□□□□□ -0.38
PTP4A1-207ENST00000639568 NLRX1Q86UT6 975 aa12.67□□□□□ -0.38
PTP4A1-207ENST00000639568 IQCA1Q86XH1 822 aa12.67□□□□□ -0.38
PTP4A1-207ENST00000639568 SLC39A11Q8N1S5 342 aa12.67□□□□□ -0.38
PTP4A1-207ENST00000639568 CASD1Q96PB1 797 aa12.67□□□□□ -0.38
PTP4A1-207ENST00000639568 FOXQ1Q9C009 403 aa12.67□□□□□ -0.38
PTP4A1-207ENST00000639568 AZI2Q9H6S1 392 aa12.67□□□□□ -0.38
PTP4A1-207ENST00000639568 NOC2LQ9Y3T9 749 aaKnown RBP12.67□□□□□ -0.38
PTP4A1-207ENST00000639568 CEP295Q9C0D2 2601 aa12.66□□□□□ -0.38
PTP4A1-207ENST00000639568 SMIM35A0A1B0GVV1 85 aa12.66□□□□□ -0.38
PTP4A1-207ENST00000639568 FGAP02671 866 aa12.66□□□□□ -0.38
PTP4A1-207ENST00000639568 GLULP15104 373 aa12.66□□□□□ -0.38
PTP4A1-207ENST00000639568 TGM1P22735 817 aa12.66□□□□□ -0.38
PTP4A1-207ENST00000639568 METAP2P50579 478 aaKnown RBP eCLIP12.66□□□□□ -0.38
PTP4A1-207ENST00000639568 FAM189BP81408 668 aa12.66□□□□□ -0.38
PTP4A1-207ENST00000639568 SLC22A17Q8WUG5 538 aa12.66□□□□□ -0.38
PTP4A1-207ENST00000639568 AUTS2Q8WXX7 1259 aa12.66□□□□□ -0.38
PTP4A1-207ENST00000639568 RNF41Q9H4P4 317 aaPredicted RBP12.66□□□□□ -0.38
PTP4A1-207ENST00000639568 PARD6AQ9NPB6 346 aa12.66□□□□□ -0.38
PTP4A1-207ENST00000639568 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.66□□□□□ -0.38
PTP4A1-207ENST00000639568 SOBPA7XYQ1 873 aa12.65□□□□□ -0.38
PTP4A1-207ENST00000639568 LRRN2O75325 713 aa12.65□□□□□ -0.38
PTP4A1-207ENST00000639568 PROS1P07225 676 aa12.65□□□□□ -0.38
PTP4A1-207ENST00000639568 MS4A1P11836 297 aa12.65□□□□□ -0.38
PTP4A1-207ENST00000639568 KLRC2P26717 231 aa12.65□□□□□ -0.38
PTP4A1-207ENST00000639568 HAND2P61296 217 aa12.65□□□□□ -0.38
PTP4A1-207ENST00000639568 SPEM2Q0P670 501 aa12.65□□□□□ -0.38
PTP4A1-207ENST00000639568 RNF169Q8NCN4 708 aa12.65□□□□□ -0.38
PTP4A1-207ENST00000639568 ZBTB44Q8NCP5 570 aa12.65□□□□□ -0.38
PTP4A1-207ENST00000639568 CDHR1Q96JP9 859 aa12.65□□□□□ -0.38
PTP4A1-207ENST00000639568 ZBTB40Q9NUA8 1239 aa12.65□□□□□ -0.38
PTP4A1-207ENST00000639568 EPS15L1Q9UBC2 864 aa12.65□□□□□ -0.38
PTP4A1-207ENST00000639568 IRAK3Q9Y616 596 aa12.65□□□□□ -0.38
PTP4A1-207ENST00000639568 ZFYVE26Q68DK2 2539 aa12.65□□□□□ -0.38
PTP4A1-207ENST00000639568 ZZEF1O43149 2961 aa12.65□□□□□ -0.38
PTP4A1-207ENST00000639568 FRYQ5TBA9 3013 aa12.64□□□□□ -0.39
PTP4A1-207ENST00000639568 GSTTP1A0A1W2PQM5 241 aa12.64□□□□□ -0.39
PTP4A1-207ENST00000639568 NT5C1B-RDH14C9J2C7 533 aa12.64□□□□□ -0.39
PTP4A1-207ENST00000639568 PPP1R11O60927 126 aaPredicted RBP12.64□□□□□ -0.39
PTP4A1-207ENST00000639568 POLGP54098 1239 aaPredicted RBP12.64□□□□□ -0.39
PTP4A1-207ENST00000639568 STARD6P59095 220 aa12.64□□□□□ -0.39
PTP4A1-207ENST00000639568 SHC2P98077 582 aa12.64□□□□□ -0.39
PTP4A1-207ENST00000639568 PLCB4Q15147 1175 aa12.64□□□□□ -0.39
PTP4A1-207ENST00000639568 ELMSAN1Q6PJG2 1045 aa12.64□□□□□ -0.39
PTP4A1-207ENST00000639568 HOMER1Q86YM7 354 aa12.64□□□□□ -0.39
PTP4A1-207ENST00000639568 FEZF2Q8TBJ5 459 aa12.64□□□□□ -0.39
PTP4A1-207ENST00000639568 TRAPPC12Q8WVT3 735 aa12.64□□□□□ -0.39
PTP4A1-207ENST00000639568 EMILIN2Q9BXX0 1053 aa12.64□□□□□ -0.39
PTP4A1-207ENST00000639568 ZBP1Q9H171 429 aa12.64□□□□□ -0.39
PTP4A1-207ENST00000639568 CHMP4BQ9H444 224 aaKnown RBP12.64□□□□□ -0.39
PTP4A1-207ENST00000639568 DDX19BQ9UMR2 479 aa12.64□□□□□ -0.39
PTP4A1-207ENST00000639568 KLRF2D3W0D1 207 aa12.63□□□□□ -0.39
PTP4A1-207ENST00000639568 N4BP1O75113 896 aaKnown RBP12.63□□□□□ -0.39
PTP4A1-207ENST00000639568 CTSAP10619 480 aa12.63□□□□□ -0.39
PTP4A1-207ENST00000639568 ZSCAN20P17040 1043 aaPredicted RBP12.63□□□□□ -0.39
PTP4A1-207ENST00000639568 PMLP29590 882 aa12.63□□□□□ -0.39
PTP4A1-207ENST00000639568 BCAR1P56945 870 aa12.63□□□□□ -0.39
PTP4A1-207ENST00000639568 UBXN2BQ14CS0 331 aa12.63□□□□□ -0.39
PTP4A1-207ENST00000639568 PCNX4Q63HM2 1172 aa12.63□□□□□ -0.39
PTP4A1-207ENST00000639568 IL31Q6EBC2 164 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms