RNA–Protein interactions for RNA: ENST00000638426.1

SRSF8-202, Transcript of serine and arginine rich splicing factor 8, humanhuman

TSL 2

Gene SRSF8, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF8-202ENST00000638426 CHMP4BP1P59074 171 aa8.8□□□□□ -1
SRSF8-202ENST00000638426 SMAD3P84022 425 aaKnown RBP8.8□□□□□ -1
SRSF8-202ENST00000638426 ZNF200P98182 395 aaPredicted RBP8.8□□□□□ -1
SRSF8-202ENST00000638426 GPNMBQ14956 572 aa8.8□□□□□ -1
SRSF8-202ENST00000638426 PCNX4Q63HM2 1172 aa8.8□□□□□ -1
SRSF8-202ENST00000638426 HEATR3Q7Z4Q2 680 aa8.8□□□□□ -1
SRSF8-202ENST00000638426 SESTD1Q86VW0 696 aa8.8□□□□□ -1
SRSF8-202ENST00000638426 TRIM50Q86XT4 487 aa8.8□□□□□ -1
SRSF8-202ENST00000638426 DHX37Q8IY37 1157 aaKnown RBP8.8□□□□□ -1
SRSF8-202ENST00000638426 TMEM199Q8N511 208 aa8.8□□□□□ -1
SRSF8-202ENST00000638426 SMARCC2Q8TAQ2 1214 aa8.8□□□□□ -1
SRSF8-202ENST00000638426 BRF1Q92994 677 aa8.8□□□□□ -1
SRSF8-202ENST00000638426 C16orf70Q9BSU1 422 aa8.8□□□□□ -1
SRSF8-202ENST00000638426 NIFKQ9BYG3 293 aaKnown RBP8.8□□□□□ -1
SRSF8-202ENST00000638426 CRISPLD1Q9H336 500 aa8.8□□□□□ -1
SRSF8-202ENST00000638426 HDAC6Q9UBN7 1215 aa8.8□□□□□ -1
SRSF8-202ENST00000638426 USP3Q9Y6I4 520 aa8.8□□□□□ -1
SRSF8-202ENST00000638426 COL4A6Q14031 1691 aa8.8□□□□□ -1
SRSF8-202ENST00000638426 TTC28Q96AY4 2481 aa8.8□□□□□ -1
SRSF8-202ENST00000638426 BRWD1Q9NSI6 2320 aa8.8□□□□□ -1
SRSF8-202ENST00000638426 PRRC2BQ5JSZ5 2229 aaKnown RBP8.8□□□□□ -1
SRSF8-202ENST00000638426 FNDC1Q4ZHG4 1894 aaPredicted RBP8.79□□□□□ -1
SRSF8-202ENST00000638426 KPNA6O60684 536 aa8.79□□□□□ -1
SRSF8-202ENST00000638426 ATP9AO75110 1047 aa8.79□□□□□ -1
SRSF8-202ENST00000638426 KCNA2P16389 499 aa8.79□□□□□ -1
SRSF8-202ENST00000638426 ITGB5P18084 799 aa8.79□□□□□ -1
SRSF8-202ENST00000638426 MX2P20592 715 aa8.79□□□□□ -1
SRSF8-202ENST00000638426 ATP4AP20648 1035 aa8.79□□□□□ -1
SRSF8-202ENST00000638426 CASTP20810 708 aaKnown RBP8.79□□□□□ -1
SRSF8-202ENST00000638426 PLA2G4AP47712 749 aa8.79□□□□□ -1
SRSF8-202ENST00000638426 TRAF1Q13077 416 aa8.79□□□□□ -1
SRSF8-202ENST00000638426 LAMC2Q13753 1193 aa8.79□□□□□ -1
SRSF8-202ENST00000638426 TOB2Q14106 344 aaPredicted RBP8.79□□□□□ -1
SRSF8-202ENST00000638426 KRT32Q14532 448 aa8.79□□□□□ -1
SRSF8-202ENST00000638426 NTRK3Q16288 839 aa8.79□□□□□ -1
SRSF8-202ENST00000638426 PKN1Q16512 942 aa8.79□□□□□ -1
SRSF8-202ENST00000638426 DGKDQ16760 1214 aa8.79□□□□□ -1
SRSF8-202ENST00000638426 KIAA0753Q2KHM9 967 aa8.79□□□□□ -1
SRSF8-202ENST00000638426 TCTN1Q2MV58 587 aa8.79□□□□□ -1
SRSF8-202ENST00000638426 BRDTQ58F21 947 aaPredicted RBP8.79□□□□□ -1
SRSF8-202ENST00000638426 CYFIP1Q7L576 1253 aa8.79□□□□□ -1
SRSF8-202ENST00000638426 OTOP2Q7RTS6 562 aa8.79□□□□□ -1
SRSF8-202ENST00000638426 PGBD3Q8N328 593 aa8.79□□□□□ -1
SRSF8-202ENST00000638426 SPATA33Q96N06 139 aa8.79□□□□□ -1
SRSF8-202ENST00000638426 ALG1Q9BT22 464 aa8.79□□□□□ -1
SRSF8-202ENST00000638426 USP26Q9BXU7 913 aa8.79□□□□□ -1
SRSF8-202ENST00000638426 SEZ6LQ9BYH1 1024 aa8.79□□□□□ -1
SRSF8-202ENST00000638426 PBX4Q9BYU1 374 aa8.79□□□□□ -1
SRSF8-202ENST00000638426 PSTPIP2Q9H939 334 aa8.79□□□□□ -1
SRSF8-202ENST00000638426 ZNF358Q9NW07 568 aa8.79□□□□□ -1
SRSF8-202ENST00000638426 RBM28Q9NW13 759 aaKnown RBP8.79□□□□□ -1
SRSF8-202ENST00000638426 TMEM260Q9NX78 707 aa8.79□□□□□ -1
SRSF8-202ENST00000638426 PPP4R2Q9NY27 417 aa8.79□□□□□ -1
SRSF8-202ENST00000638426 GTF2IRD1Q9UHL9 959 aa8.79□□□□□ -1
SRSF8-202ENST00000638426 TCF20Q9UGU0 1960 aaKnown RBP8.79□□□□□ -1
SRSF8-202ENST00000638426 BACH1O14867 736 aa8.78□□□□□ -1
SRSF8-202ENST00000638426 FIBPO43427 364 aa8.78□□□□□ -1
SRSF8-202ENST00000638426 ATP9BO43861 1147 aa8.78□□□□□ -1
SRSF8-202ENST00000638426 LGALS2P05162 132 aa8.78□□□□□ -1
SRSF8-202ENST00000638426 NEFLP07196 543 aa8.78□□□□□ -1
SRSF8-202ENST00000638426 IQCF3P0C7M6 154 aa8.78□□□□□ -1
SRSF8-202ENST00000638426 TGFB3P10600 412 aa8.78□□□□□ -1
SRSF8-202ENST00000638426 HOXC8P31273 242 aa8.78□□□□□ -1
SRSF8-202ENST00000638426 RCAN1P53805 252 aa8.78□□□□□ -1
SRSF8-202ENST00000638426 PTPN11Q06124 597 aaPredicted RBP8.78□□□□□ -1
SRSF8-202ENST00000638426 KCNMA1Q12791 1236 aa8.78□□□□□ -1
SRSF8-202ENST00000638426 MBTPS1Q14703 1052 aa8.78□□□□□ -1
SRSF8-202ENST00000638426 PTGISQ16647 500 aa8.78□□□□□ -1
SRSF8-202ENST00000638426 TRIM71Q2Q1W2 868 aaKnown RBP8.78□□□□□ -1
SRSF8-202ENST00000638426 PSRC1Q6PGN9 363 aaPredicted RBP8.78□□□□□ -1
SRSF8-202ENST00000638426 KCNV1Q6PIU1 500 aa8.78□□□□□ -1
SRSF8-202ENST00000638426 BLOC1S2Q6QNY1 142 aa8.78□□□□□ -1
SRSF8-202ENST00000638426 DEFB128Q7Z7B8 93 aa8.78□□□□□ -1
SRSF8-202ENST00000638426 FBXL16Q8N461 479 aa8.78□□□□□ -1
SRSF8-202ENST00000638426 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.78□□□□□ -1
SRSF8-202ENST00000638426 C1orf216Q8TAB5 229 aa8.78□□□□□ -1
SRSF8-202ENST00000638426 CYP2W1Q8TAV3 490 aa8.78□□□□□ -1
SRSF8-202ENST00000638426 HERVK_113Q902F9 699 aa8.78□□□□□ -1
SRSF8-202ENST00000638426 PHKBQ93100 1093 aa8.78□□□□□ -1
SRSF8-202ENST00000638426 GPR20Q99678 358 aa8.78□□□□□ -1
SRSF8-202ENST00000638426 OSBPL7Q9BZF2 842 aa8.78□□□□□ -1
SRSF8-202ENST00000638426 SEMA6BQ9H3T3 888 aa8.78□□□□□ -1
SRSF8-202ENST00000638426 NCOA5Q9HCD5 579 aaKnown RBP8.78□□□□□ -1
SRSF8-202ENST00000638426 PRDM6Q9NQX0 595 aa8.78□□□□□ -1
SRSF8-202ENST00000638426 NDFIP2Q9NV92 336 aa8.78□□□□□ -1
SRSF8-202ENST00000638426 PCDHA6Q9UN73 950 aa8.78□□□□□ -1
SRSF8-202ENST00000638426 STXBP5LQ9Y2K9 1186 aa8.78□□□□□ -1
SRSF8-202ENST00000638426 YBX2Q9Y2T7 364 aaKnown RBP8.78□□□□□ -1
SRSF8-202ENST00000638426 PCDHA8Q9Y5H6 950 aa8.78□□□□□ -1
SRSF8-202ENST00000638426 UBIAD1Q9Y5Z9 338 aa8.78□□□□□ -1
SRSF8-202ENST00000638426 PLXNA4Q9HCM2 1894 aa8.78□□□□□ -1
SRSF8-202ENST00000638426 TTC3P53804 2025 aa8.78□□□□□ -1
SRSF8-202ENST00000638426 DTNBO60941 627 aa8.77□□□□□ -1.01
SRSF8-202ENST00000638426 PPFIA4O75335 1185 aa8.77□□□□□ -1.01
SRSF8-202ENST00000638426 STAM2O75886 525 aa8.77□□□□□ -1.01
SRSF8-202ENST00000638426 REC8O95072 547 aa8.77□□□□□ -1.01
SRSF8-202ENST00000638426 HMGB1P09429 215 aaKnown RBP8.77□□□□□ -1.01
SRSF8-202ENST00000638426 SUPT20HL2P0C7V6 817 aa8.77□□□□□ -1.01
SRSF8-202ENST00000638426 MYOGP15173 224 aa8.77□□□□□ -1.01
SRSF8-202ENST00000638426 METAP2P50579 478 aaKnown RBP eCLIP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms