RNA–Protein interactions for RNA: ENST00000636389.1

CACNA1A-225, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 8,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-225ENST00000636389 GTF2H3Q13889 308 aa18.7■□□□□ 0.58
CACNA1A-225ENST00000636389 ADCK5Q3MIX3 580 aa18.7■□□□□ 0.58
CACNA1A-225ENST00000636389 ADNPQ9H2P0 1102 aa18.7■□□□□ 0.58
CACNA1A-225ENST00000636389 ARHGAP26Q9UNA1 814 aa18.7■□□□□ 0.58
CACNA1A-225ENST00000636389 GOLGA8IPA6NC78 632 aa18.7■□□□□ 0.58
CACNA1A-225ENST00000636389 GOLGA8JA6NMD2 632 aa18.7■□□□□ 0.58
CACNA1A-225ENST00000636389 MDM2Q00987 491 aaPredicted RBP18.7■□□□□ 0.58
CACNA1A-225ENST00000636389 C1orf146Q5VVC0 180 aa18.7■□□□□ 0.58
CACNA1A-225ENST00000636389 ZMYND12Q9H0C1 365 aa18.7■□□□□ 0.58
CACNA1A-225ENST00000636389 GTPBP6O43824 516 aaPredicted RBP18.69■□□□□ 0.58
CACNA1A-225ENST00000636389 CATSPER4Q7RTX7 472 aa18.69■□□□□ 0.58
CACNA1A-225ENST00000636389 SMYD4Q8IYR2 804 aaPredicted RBP18.69■□□□□ 0.58
CACNA1A-225ENST00000636389 FTCDO95954 541 aa18.69■□□□□ 0.58
CACNA1A-225ENST00000636389 NCALDP61601 193 aa18.69■□□□□ 0.58
CACNA1A-225ENST00000636389 SYTL3Q4VX76 610 aa18.69■□□□□ 0.58
CACNA1A-225ENST00000636389 CCNYL1Q8N7R7 359 aa18.69■□□□□ 0.58
CACNA1A-225ENST00000636389 C1orf131Q8NDD1 294 aaKnown RBP18.69■□□□□ 0.58
CACNA1A-225ENST00000636389 AGR3Q8TD06 166 aa18.69■□□□□ 0.58
CACNA1A-225ENST00000636389 PNMA3Q9UL41 463 aa18.69■□□□□ 0.58
CACNA1A-225ENST00000636389 FANCAO15360 1455 aa18.69■□□□□ 0.58
CACNA1A-225ENST00000636389 hCG_2014768A0A024R1R8 64 aa18.69■□□□□ 0.58
CACNA1A-225ENST00000636389 APOA1P02647 267 aa18.69■□□□□ 0.58
CACNA1A-225ENST00000636389 COPB1P53618 953 aaKnown RBP18.69■□□□□ 0.58
CACNA1A-225ENST00000636389 TSC22D1Q15714 1073 aa18.69■□□□□ 0.58
CACNA1A-225ENST00000636389 ALS2CLQ60I27 953 aa18.69■□□□□ 0.58
CACNA1A-225ENST00000636389 SUCLG2Q96I99 432 aa18.69■□□□□ 0.58
CACNA1A-225ENST00000636389 H2AFY2Q9P0M6 372 aaPredicted RBP18.69■□□□□ 0.58
CACNA1A-225ENST00000636389 PGRMC1O00264 195 aaKnown RBP18.69■□□□□ 0.58
CACNA1A-225ENST00000636389 DHX9Q08211 1270 aaKnown RBP18.69■□□□□ 0.58
CACNA1A-225ENST00000636389 CACNB2Q08289 660 aaPredicted RBP18.69■□□□□ 0.58
CACNA1A-225ENST00000636389 KDELC2Q7Z4H8 507 aa18.69■□□□□ 0.58
CACNA1A-225ENST00000636389 PDIK1LQ8N165 341 aa18.69■□□□□ 0.58
CACNA1A-225ENST00000636389 ATXN7L3BQ96GX2 97 aa18.69■□□□□ 0.58
CACNA1A-225ENST00000636389 PRAMEP78395 509 aa18.69■□□□□ 0.58
CACNA1A-225ENST00000636389 CDHR1Q96JP9 859 aa18.69■□□□□ 0.58
CACNA1A-225ENST00000636389 GPBP1L1Q9HC44 474 aaPredicted RBP18.69■□□□□ 0.58
CACNA1A-225ENST00000636389 MAN1C1Q9NR34 630 aa18.69■□□□□ 0.58
CACNA1A-225ENST00000636389 SYNJ1O43426 1573 aa18.69■□□□□ 0.58
CACNA1A-225ENST00000636389 RAD17O75943 681 aa18.68■□□□□ 0.58
CACNA1A-225ENST00000636389 SLC52A2Q9HAB3 445 aa18.68■□□□□ 0.58
CACNA1A-225ENST00000636389 NDUFA8P51970 172 aa18.68■□□□□ 0.58
CACNA1A-225ENST00000636389 LRRC8AQ8IWT6 810 aa18.68■□□□□ 0.58
CACNA1A-225ENST00000636389 ICA1LQ8NDH6 482 aa18.68■□□□□ 0.58
CACNA1A-225ENST00000636389 SLC13A1Q9BZW2 595 aa18.68■□□□□ 0.58
CACNA1A-225ENST00000636389 SYT2Q8N9I0 419 aaPredicted RBP18.68■□□□□ 0.58
CACNA1A-225ENST00000636389 ARAP1Q96P48 1450 aa18.68■□□□□ 0.58
CACNA1A-225ENST00000636389 DR1Q01658 176 aa18.68■□□□□ 0.58
CACNA1A-225ENST00000636389 TSC22D3Q99576 134 aa18.68■□□□□ 0.58
CACNA1A-225ENST00000636389 CCDC151A5D8V7 595 aa18.68■□□□□ 0.58
CACNA1A-225ENST00000636389 GOLGA8RI6L899 631 aa18.68■□□□□ 0.58
CACNA1A-225ENST00000636389 DBNDD1Q9H9R9 158 aa18.68■□□□□ 0.58
CACNA1A-225ENST00000636389 WDR75Q8IWA0 830 aaKnown RBP18.68■□□□□ 0.58
CACNA1A-225ENST00000636389 EYA1Q99502 592 aa18.68■□□□□ 0.58
CACNA1A-225ENST00000636389 PARVGQ9HBI0 331 aa18.68■□□□□ 0.58
CACNA1A-225ENST00000636389 SLC16A1P53985 500 aa18.68■□□□□ 0.58
CACNA1A-225ENST00000636389 SURF1Q15526 300 aa18.68■□□□□ 0.58
CACNA1A-225ENST00000636389 TSSK1BQ9BXA7 367 aa18.68■□□□□ 0.58
CACNA1A-225ENST00000636389 ZC3H4Q9UPT8 1303 aaKnown RBP18.67■□□□□ 0.58
CACNA1A-225ENST00000636389 DENND4BO75064 1496 aaPredicted RBP18.67■□□□□ 0.58
CACNA1A-225ENST00000636389 H0Y3Z8 333 aa18.67■□□□□ 0.58
CACNA1A-225ENST00000636389 RFX8Q6ZV50 586 aa18.67■□□□□ 0.58
CACNA1A-225ENST00000636389 G2E3Q7L622 706 aa18.67■□□□□ 0.58
CACNA1A-225ENST00000636389 RMDN1Q96DB5 314 aa18.67■□□□□ 0.58
CACNA1A-225ENST00000636389 MYH10P35580 1976 aa18.67■□□□□ 0.58
CACNA1A-225ENST00000636389 DNMBPQ6XZF7 1577 aa18.67■□□□□ 0.58
CACNA1A-225ENST00000636389 PPP1R2P3Q6NXS1 205 aa18.67■□□□□ 0.58
CACNA1A-225ENST00000636389 FANCBQ8NB91 859 aa18.67■□□□□ 0.58
CACNA1A-225ENST00000636389 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.67■□□□□ 0.58
CACNA1A-225ENST00000636389 TNKSO95271 1327 aa18.67■□□□□ 0.58
CACNA1A-225ENST00000636389 SNAP25P60880 206 aa18.67■□□□□ 0.58
CACNA1A-225ENST00000636389 C6orf118Q5T5N4 469 aa18.67■□□□□ 0.58
CACNA1A-225ENST00000636389 ANKRD40Q6AI12 368 aa18.67■□□□□ 0.58
CACNA1A-225ENST00000636389 SPON2Q9BUD6 331 aa18.67■□□□□ 0.58
CACNA1A-225ENST00000636389 TMEM245Q9H330 911 aa18.67■□□□□ 0.58
CACNA1A-225ENST00000636389 CNKSR1Q969H4 720 aa18.67■□□□□ 0.58
CACNA1A-225ENST00000636389 AURKCQ9UQB9 309 aa18.67■□□□□ 0.58
CACNA1A-225ENST00000636389 IPO5O00410 1097 aaKnown RBP18.67■□□□□ 0.58
CACNA1A-225ENST00000636389 FLAD1Q8NFF5 587 aa18.67■□□□□ 0.58
CACNA1A-225ENST00000636389 SAYSD1Q9NPB0 183 aa18.67■□□□□ 0.58
CACNA1A-225ENST00000636389 ZBTB12Q9Y330 459 aaPredicted RBP18.67■□□□□ 0.58
CACNA1A-225ENST00000636389 OR6P1Q8NGX9 317 aa18.67■□□□□ 0.58
CACNA1A-225ENST00000636389 BTBD6Q96KE9 485 aa18.67■□□□□ 0.58
CACNA1A-225ENST00000636389 ZNF556Q9HAH1 456 aa18.67■□□□□ 0.58
CACNA1A-225ENST00000636389 PALD1Q9ULE6 856 aa18.67■□□□□ 0.58
CACNA1A-225ENST00000636389 RSPH10B2B2RC85 870 aa18.66■□□□□ 0.58
CACNA1A-225ENST00000636389 RSPH10BP0C881 870 aa18.66■□□□□ 0.58
CACNA1A-225ENST00000636389 KCNA2P16389 499 aa18.66■□□□□ 0.58
CACNA1A-225ENST00000636389 ASPRV1Q53RT3 343 aa18.66■□□□□ 0.58
CACNA1A-225ENST00000636389 SLC35F6Q8N357 371 aa18.66■□□□□ 0.58
CACNA1A-225ENST00000636389 MRPL40Q9NQ50 206 aaKnown RBP18.66■□□□□ 0.58
CACNA1A-225ENST00000636389 COPRSQ9NQ92 184 aa18.66■□□□□ 0.58
CACNA1A-225ENST00000636389 KPNA7A9QM74 516 aa18.66■□□□□ 0.58
CACNA1A-225ENST00000636389 PRG3Q9Y2Y8 225 aaPredicted RBP18.66■□□□□ 0.58
CACNA1A-225ENST00000636389 HUS1O60921 280 aa18.66■□□□□ 0.58
CACNA1A-225ENST00000636389 CASP14P31944 242 aa18.66■□□□□ 0.58
CACNA1A-225ENST00000636389 IP6K1Q92551 441 aa18.66■□□□□ 0.58
CACNA1A-225ENST00000636389 RIMS2Q9UQ26 1411 aa18.66■□□□□ 0.58
CACNA1A-225ENST00000636389 SUPT3HO75486 399 aa18.66■□□□□ 0.58
CACNA1A-225ENST00000636389 RASGRP4Q8TDF6 673 aa18.66■□□□□ 0.58
CACNA1A-225ENST00000636389 EXOC4Q96A65 974 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms