RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 KIF17Q9P2E2 1029 aa17.09■□□□□ 0.33
CACNA1A-221ENST00000636012 SYCE1LA8MT33 242 aa17.08■□□□□ 0.33
CACNA1A-221ENST00000636012 CENPAP49450 140 aa17.08■□□□□ 0.33
CACNA1A-221ENST00000636012 KRT17Q04695 432 aa17.08■□□□□ 0.33
CACNA1A-221ENST00000636012 AP1B1Q10567 949 aa17.08■□□□□ 0.33
CACNA1A-221ENST00000636012 ZNF699Q32M78 642 aa17.08■□□□□ 0.33
CACNA1A-221ENST00000636012 SLFN12LQ6IEE8 588 aa17.08■□□□□ 0.33
CACNA1A-221ENST00000636012 THOC1Q96FV9 657 aaKnown RBP17.08■□□□□ 0.33
CACNA1A-221ENST00000636012 DYRK4Q9NR20 520 aa17.08■□□□□ 0.33
CACNA1A-221ENST00000636012 POLR3EQ9NVU0 708 aa17.08■□□□□ 0.33
CACNA1A-221ENST00000636012 PIM2Q9P1W9 311 aa17.08■□□□□ 0.33
CACNA1A-221ENST00000636012 PCDHA13Q9Y5I0 950 aa17.08■□□□□ 0.33
CACNA1A-221ENST00000636012 LMNAP02545 664 aaKnown RBP17.08■□□□□ 0.33
CACNA1A-221ENST00000636012 MMP10P09238 476 aa17.08■□□□□ 0.33
CACNA1A-221ENST00000636012 HOXD10P28358 340 aa17.08■□□□□ 0.33
CACNA1A-221ENST00000636012 MMP19Q99542 508 aa17.08■□□□□ 0.33
CACNA1A-221ENST00000636012 MAPKBP1O60336 1514 aa17.08■□□□□ 0.32
CACNA1A-221ENST00000636012 SLC8A1P32418 973 aa17.08■□□□□ 0.32
CACNA1A-221ENST00000636012 SRRM1Q8IYB3 904 aaKnown RBP17.08■□□□□ 0.32
CACNA1A-221ENST00000636012 GIMAP8Q8ND71 665 aaPredicted RBP17.08■□□□□ 0.32
CACNA1A-221ENST00000636012 SH3RF3Q8TEJ3 882 aaPredicted RBP17.08■□□□□ 0.32
CACNA1A-221ENST00000636012 PBXIP1Q96AQ6 731 aa17.08■□□□□ 0.32
CACNA1A-221ENST00000636012 SPTLC3Q9NUV7 552 aa17.08■□□□□ 0.32
CACNA1A-221ENST00000636012 DONSONQ9NYP3 566 aa17.08■□□□□ 0.32
CACNA1A-221ENST00000636012 HUS1O60921 280 aa17.08■□□□□ 0.32
CACNA1A-221ENST00000636012 APOA5Q6Q788 366 aa17.08■□□□□ 0.32
CACNA1A-221ENST00000636012 TMC4Q7Z404 712 aa17.08■□□□□ 0.32
CACNA1A-221ENST00000636012 SSH3Q8TE77 659 aa17.08■□□□□ 0.32
CACNA1A-221ENST00000636012 PPP1R14AQ96A00 147 aa17.08■□□□□ 0.32
CACNA1A-221ENST00000636012 E2F6O75461 281 aa17.08■□□□□ 0.32
CACNA1A-221ENST00000636012 LRRC31Q6UY01 552 aa17.08■□□□□ 0.32
CACNA1A-221ENST00000636012 FBXO18Q8NFZ0 1043 aa17.08■□□□□ 0.32
CACNA1A-221ENST00000636012 TRIM15Q9C019 465 aa17.08■□□□□ 0.32
CACNA1A-221ENST00000636012 SOWAHDA6NJG2 315 aa17.08■□□□□ 0.32
CACNA1A-221ENST00000636012 HDLBPQ00341 1268 aaKnown RBP17.08■□□□□ 0.32
CACNA1A-221ENST00000636012 SMAD1Q15797 465 aaKnown RBP17.08■□□□□ 0.32
CACNA1A-221ENST00000636012 ZNF589Q86UQ0 364 aaPredicted RBP17.08■□□□□ 0.32
CACNA1A-221ENST00000636012 EDEM3Q9BZQ6 932 aa17.08■□□□□ 0.32
CACNA1A-221ENST00000636012 GTSE1Q9NYZ3 720 aa17.08■□□□□ 0.32
CACNA1A-221ENST00000636012 ABCC4O15439 1325 aa17.08■□□□□ 0.32
CACNA1A-221ENST00000636012 ZNF263O14978 683 aa17.07■□□□□ 0.32
CACNA1A-221ENST00000636012 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.07■□□□□ 0.32
CACNA1A-221ENST00000636012 GIPC2Q8TF65 315 aa17.07■□□□□ 0.32
CACNA1A-221ENST00000636012 PBKQ96KB5 322 aa17.07■□□□□ 0.32
CACNA1A-221ENST00000636012 TMCC1O94876 653 aa17.07■□□□□ 0.32
CACNA1A-221ENST00000636012 STXBP2Q15833 593 aa17.07■□□□□ 0.32
CACNA1A-221ENST00000636012 CENPUQ71F23 418 aa17.07■□□□□ 0.32
CACNA1A-221ENST00000636012 CYTH2Q99418 400 aa17.07■□□□□ 0.32
CACNA1A-221ENST00000636012 FMO2Q99518 471 aa17.07■□□□□ 0.32
CACNA1A-221ENST00000636012 SERPINI1Q99574 410 aa17.07■□□□□ 0.32
CACNA1A-221ENST00000636012 C6orf203Q9P0P8 240 aaPredicted RBP17.07■□□□□ 0.32
CACNA1A-221ENST00000636012 PCDHA5Q9Y5H7 936 aa17.07■□□□□ 0.32
CACNA1A-221ENST00000636012 LUC7L3O95232 432 aaKnown RBP17.07■□□□□ 0.32
CACNA1A-221ENST00000636012 ZMYM1Q5SVZ6 1142 aa17.07■□□□□ 0.32
CACNA1A-221ENST00000636012 PPP1R2P3Q6NXS1 205 aa17.07■□□□□ 0.32
CACNA1A-221ENST00000636012 HSPA4LO95757 839 aa17.07■□□□□ 0.32
CACNA1A-221ENST00000636012 ZNF667Q5HYK9 610 aa17.07■□□□□ 0.32
CACNA1A-221ENST00000636012 DDX53Q86TM3 631 aaKnown RBP17.07■□□□□ 0.32
CACNA1A-221ENST00000636012 CRLF3Q8IUI8 442 aa17.07■□□□□ 0.32
CACNA1A-221ENST00000636012 HIPK4Q8NE63 616 aa17.07■□□□□ 0.32
CACNA1A-221ENST00000636012 DBNLQ9UJU6 430 aaKnown RBP17.07■□□□□ 0.32
CACNA1A-221ENST00000636012 MMP1P03956 469 aa17.07■□□□□ 0.32
CACNA1A-221ENST00000636012 CACNB2Q08289 660 aaPredicted RBP17.07■□□□□ 0.32
CACNA1A-221ENST00000636012 TEKT4Q8WW24 435 aa17.07■□□□□ 0.32
CACNA1A-221ENST00000636012 ASIC4Q96FT7 647 aa17.07■□□□□ 0.32
CACNA1A-221ENST00000636012 TRPC7Q9HCX4 862 aa17.07■□□□□ 0.32
CACNA1A-221ENST00000636012 ABCB11O95342 1321 aa17.07■□□□□ 0.32
CACNA1A-221ENST00000636012 PTPRKQ15262 1439 aa17.07■□□□□ 0.32
CACNA1A-221ENST00000636012 PAPOLAP51003 745 aaKnown RBP17.07■□□□□ 0.32
CACNA1A-221ENST00000636012 MAPK6Q16659 721 aa17.07■□□□□ 0.32
CACNA1A-221ENST00000636012 ADCK5Q3MIX3 580 aa17.07■□□□□ 0.32
CACNA1A-221ENST00000636012 NDFIP2Q9NV92 336 aa17.07■□□□□ 0.32
CACNA1A-221ENST00000636012 NRBP1Q9UHY1 535 aa17.07■□□□□ 0.32
CACNA1A-221ENST00000636012 L3MBTL1Q9Y468 752 aa17.07■□□□□ 0.32
CACNA1A-221ENST00000636012 MAN1A2O60476 641 aa17.06■□□□□ 0.32
CACNA1A-221ENST00000636012 BRD1O95696 1058 aa17.06■□□□□ 0.32
CACNA1A-221ENST00000636012 PKP1Q13835 747 aa17.06■□□□□ 0.32
CACNA1A-221ENST00000636012 SMYD3Q9H7B4 428 aa17.06■□□□□ 0.32
CACNA1A-221ENST00000636012 GPC3P51654 580 aa17.06■□□□□ 0.32
CACNA1A-221ENST00000636012 POLE2P56282 527 aa17.06■□□□□ 0.32
CACNA1A-221ENST00000636012 POU5F1BQ06416 359 aa17.06■□□□□ 0.32
CACNA1A-221ENST00000636012 TEX12Q9BXU0 123 aa17.06■□□□□ 0.32
CACNA1A-221ENST00000636012 hCG_2014768A0A024R1R8 64 aa17.06■□□□□ 0.32
CACNA1A-221ENST00000636012 TRIM60Q495X7 471 aa17.06■□□□□ 0.32
CACNA1A-221ENST00000636012 TRIM8Q9BZR9 551 aa17.06■□□□□ 0.32
CACNA1A-221ENST00000636012 KLC2Q9H0B6 622 aa17.06■□□□□ 0.32
CACNA1A-221ENST00000636012 ANTXR1Q9H6X2 564 aa17.06■□□□□ 0.32
CACNA1A-221ENST00000636012 SP110Q9HB58 689 aa17.06■□□□□ 0.32
CACNA1A-221ENST00000636012 ZBTB7AO95365 584 aa17.06■□□□□ 0.32
CACNA1A-221ENST00000636012 ASNSP08243 561 aa17.06■□□□□ 0.32
CACNA1A-221ENST00000636012 DDX42Q86XP3 938 aaKnown RBP eCLIP17.06■□□□□ 0.32
CACNA1A-221ENST00000636012 ULK4Q96C45 1275 aa17.06■□□□□ 0.32
CACNA1A-221ENST00000636012 PUS7LQ9H0K6 701 aaKnown RBP17.06■□□□□ 0.32
CACNA1A-221ENST00000636012 CTNND1O60716 968 aaKnown RBP17.06■□□□□ 0.32
CACNA1A-221ENST00000636012 DR1Q01658 176 aa17.06■□□□□ 0.32
CACNA1A-221ENST00000636012 MED4Q9NPJ6 270 aa17.06■□□□□ 0.32
CACNA1A-221ENST00000636012 HOXC10Q9NYD6 342 aa17.06■□□□□ 0.32
CACNA1A-221ENST00000636012 ANAPC7Q9UJX3 599 aa17.06■□□□□ 0.32
CACNA1A-221ENST00000636012 EIF4A3P38919 411 aaKnown RBP17.06■□□□□ 0.32
CACNA1A-221ENST00000636012 GABPB1Q06547 395 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms