RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 GOLGA8DPQ0D2H9 430 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 GRM4Q14833 912 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 NECTIN1Q15223 517 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 FRA10AC1Q70Z53 315 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 GRAMD1CQ8IYS0 662 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 RYBPQ8N488 228 aaPredicted RBP4.89□□□□□ -1.63
CHD9-221ENST00000615216 PUS7LQ9H0K6 701 aaKnown RBP4.89□□□□□ -1.63
CHD9-221ENST00000615216 SAMSN1Q9NSI8 373 aaKnown RBP4.89□□□□□ -1.63
CHD9-221ENST00000615216 ASAP2O43150 1006 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 CXCR5P32302 372 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 AP3M2P53677 418 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 GPC5P78333 572 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 TMTC4Q5T4D3 741 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 NBPF10Q6P3W6 841 aaKnown RBP4.89□□□□□ -1.63
CHD9-221ENST00000615216 PODNQ7Z5L7 613 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 UNC5CLQ8IV45 518 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 THEM5Q8N1Q8 247 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 ROBO2Q9HCK4 1378 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 AFDNP55196 1824 aaKnown RBP4.89□□□□□ -1.63
CHD9-221ENST00000615216 UBE4BO95155 1302 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 CFAP73A6NFT4 308 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 SLC16A3O15427 465 aaKnown RBP4.89□□□□□ -1.63
CHD9-221ENST00000615216 CHRNA3P32297 505 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 MAGEA9P43362 315 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 DYNLL1P63167 89 aaKnown RBP4.89□□□□□ -1.63
CHD9-221ENST00000615216 NR5A1Q13285 461 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 DRP2Q13474 957 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 TOGARAM2Q6ZUX3 1019 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 FOXP4Q8IVH2 680 aaPredicted RBP4.89□□□□□ -1.63
CHD9-221ENST00000615216 SPICE1Q8N0Z3 855 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 CCDC24Q8N4L8 307 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 UHMK1Q8TAS1 419 aaKnown RBP4.89□□□□□ -1.63
CHD9-221ENST00000615216 RASGRP4Q8TDF6 673 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 TIPINQ9BVW5 301 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 APOL6Q9BWW8 343 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 IP6K2Q9UHH9 426 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 COPEO14579 308 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 HSPA4LO95757 839 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 KRT7P08729 469 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 YWHAHQ04917 246 aaPredicted RBP4.89□□□□□ -1.63
CHD9-221ENST00000615216 LRRC41Q15345 812 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 ALX1Q15699 326 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 TRIM67Q6ZTA4 783 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 CATSPER1Q8NEC5 780 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 SNF8Q96H20 258 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.89□□□□□ -1.63
CHD9-221ENST00000615216 SCHIP1Q9P0W5 487 aaPredicted RBP4.89□□□□□ -1.63
CHD9-221ENST00000615216 ZSWIM5Q9P217 1185 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 NFU1Q9UMS0 254 aa4.89□□□□□ -1.63
CHD9-221ENST00000615216 TMEM94Q12767 1356 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 PREX1Q8TCU6 1659 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 PVALEFA0A1B0GWK0 134 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 ZFXP17010 805 aaPredicted RBP4.88□□□□□ -1.63
CHD9-221ENST00000615216 NCF2P19878 526 aaPredicted RBP4.88□□□□□ -1.63
CHD9-221ENST00000615216 GUCY2CP25092 1073 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 RASGRF1Q13972 1273 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 HSPH1Q92598 858 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 C2orf40Q9H1Z8 148 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 SLITRK6Q9H5Y7 841 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 TRIM45Q9H8W5 580 aaPredicted RBP4.88□□□□□ -1.63
CHD9-221ENST00000615216 TBC1D22BQ9NU19 505 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 SUN2Q9UH99 717 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 ZFP69BQ9UJL9 534 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 FAM187AA6NFU0 413 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 LTKP29376 864 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 ARHGDIAP52565 204 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 ZNF699Q32M78 642 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 ZNF772Q68DY9 489 aaPredicted RBP4.88□□□□□ -1.63
CHD9-221ENST00000615216 PDXDC1Q6P996 788 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 SYT2Q8N9I0 419 aaPredicted RBP4.88□□□□□ -1.63
CHD9-221ENST00000615216 FAM149B1Q96BN6 582 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.88□□□□□ -1.633e-6■■■□□ 19.2
CHD9-221ENST00000615216 NUP85Q9BW27 656 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 FBXO40Q9UH90 709 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 NOVA2Q9UNW9 492 aaKnown RBP4.88□□□□□ -1.63
CHD9-221ENST00000615216 APOBEC2Q9Y235 224 aaKnown RBP4.88□□□□□ -1.63
CHD9-221ENST00000615216 CTIFO43310 598 aaKnown RBP4.88□□□□□ -1.63
CHD9-221ENST00000615216 DHX34Q14147 1143 aaKnown RBP4.88□□□□□ -1.63
CHD9-221ENST00000615216 LARP7Q4G0J3 582 aaKnown RBP eCLIP4.88□□□□□ -1.63
CHD9-221ENST00000615216 NAALADL2Q58DX5 795 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 KIAA1755Q5JYT7 1200 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 ITPRIPL1Q6GPH6 555 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 PDXDC2PQ6P474 469 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 RASSF3Q86WH2 238 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 ANKRD13CQ8N6S4 541 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 OSBP2Q969R2 916 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 FAM20AQ96MK3 541 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 PCIF1Q9H4Z3 704 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 SUCLA2Q9P2R7 463 aaPredicted RBP4.88□□□□□ -1.63
CHD9-221ENST00000615216 PALLDQ8WX93 1383 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 TNS3Q68CZ2 1445 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 AP3B1O00203 1094 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 MEIS1O00470 390 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 GDF11O95390 407 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 ACSL3O95573 720 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 PYGLP06737 847 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 EEF1B2P24534 225 aaKnown RBP4.88□□□□□ -1.63
CHD9-221ENST00000615216 SOX5P35711 763 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 AP2B1P63010 937 aa4.88□□□□□ -1.63
CHD9-221ENST00000615216 COASYQ13057 564 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms