RNA–Protein interactions for RNA: ENST00000613459.4

HMGXB3-206, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-206ENST00000613459 TBXAS1P24557 533 aaPredicted RBP18.63■□□□□ 0.57
HMGXB3-206ENST00000613459 SLC16A2P36021 539 aa18.63■□□□□ 0.57
HMGXB3-206ENST00000613459 SAAL1Q96ER3 474 aa18.63■□□□□ 0.57
HMGXB3-206ENST00000613459 EDEM3Q9BZQ6 932 aa18.63■□□□□ 0.57
HMGXB3-206ENST00000613459 ATP6V0A4Q9HBG4 840 aa18.63■□□□□ 0.57
HMGXB3-206ENST00000613459 GINM1Q9NU53 330 aa18.63■□□□□ 0.57
HMGXB3-206ENST00000613459 GRAMD1BQ3KR37 738 aa18.63■□□□□ 0.57
HMGXB3-206ENST00000613459 FAF2Q96CS3 445 aa18.63■□□□□ 0.57
HMGXB3-206ENST00000613459 CHMP6Q96FZ7 201 aa18.63■□□□□ 0.57
HMGXB3-206ENST00000613459 STRBPQ96SI9 672 aaKnown RBP18.63■□□□□ 0.57
HMGXB3-206ENST00000613459 AP1M1Q9BXS5 423 aa18.63■□□□□ 0.57
HMGXB3-206ENST00000613459 DNAJC12Q9UKB3 198 aa18.63■□□□□ 0.57
HMGXB3-206ENST00000613459 PMLP29590 882 aa18.63■□□□□ 0.57
HMGXB3-206ENST00000613459 MECOMQ03112 1051 aa18.63■□□□□ 0.57
HMGXB3-206ENST00000613459 OCA2Q04671 838 aa18.63■□□□□ 0.57
HMGXB3-206ENST00000613459 ENOSF1Q7L5Y1 443 aa18.63■□□□□ 0.57
HMGXB3-206ENST00000613459 ELAC2Q9BQ52 826 aaKnown RBP18.63■□□□□ 0.57
HMGXB3-206ENST00000613459 NDE1Q9NXR1 346 aa18.63■□□□□ 0.57
HMGXB3-206ENST00000613459 USP17L2Q6R6M4 530 aa18.62■□□□□ 0.57
HMGXB3-206ENST00000613459 ACAD11Q709F0 780 aa18.62■□□□□ 0.57
HMGXB3-206ENST00000613459 RYBPQ8N488 228 aaPredicted RBP18.62■□□□□ 0.57
HMGXB3-206ENST00000613459 SHROOM2Q13796 1616 aa18.62■□□□□ 0.57
HMGXB3-206ENST00000613459 PFASO15067 1338 aa18.62■□□□□ 0.57
HMGXB3-206ENST00000613459 NPR1P16066 1061 aa18.62■□□□□ 0.57
HMGXB3-206ENST00000613459 PRELPP51888 382 aa18.62■□□□□ 0.57
HMGXB3-206ENST00000613459 UBXN2AP68543 259 aa18.62■□□□□ 0.57
HMGXB3-206ENST00000613459 GRAMD4Q6IC98 578 aa18.62■□□□□ 0.57
HMGXB3-206ENST00000613459 CC2D1AQ6P1N0 951 aaPredicted RBP18.62■□□□□ 0.57
HMGXB3-206ENST00000613459 EP400NLQ6ZTU2 488 aa18.62■□□□□ 0.57
HMGXB3-206ENST00000613459 SLC13A4Q9UKG4 626 aa18.62■□□□□ 0.57
HMGXB3-206ENST00000613459 ASAP1Q9ULH1 1129 aa18.62■□□□□ 0.57
HMGXB3-206ENST00000613459 TRIM72Q6ZMU5 477 aa18.62■□□□□ 0.57
HMGXB3-206ENST00000613459 ARHGAP18Q8N392 663 aa18.62■□□□□ 0.57
HMGXB3-206ENST00000613459 MAGEB5Q9BZ81 275 aa18.62■□□□□ 0.57
HMGXB3-206ENST00000613459 STOML1Q9UBI4 398 aa18.62■□□□□ 0.57
HMGXB3-206ENST00000613459 MYO3BQ8WXR4 1341 aa18.62■□□□□ 0.57
HMGXB3-206ENST00000613459 TMEM247A6NEH6 219 aa18.62■□□□□ 0.57
HMGXB3-206ENST00000613459 EPHB1P54762 984 aa18.62■□□□□ 0.57
HMGXB3-206ENST00000613459 ZC3H18Q86VM9 953 aaKnown RBP18.62■□□□□ 0.57
HMGXB3-206ENST00000613459 RAD54LQ92698 747 aa18.62■□□□□ 0.57
HMGXB3-206ENST00000613459 PIH1D3Q9NQM4 214 aaKnown RBP18.62■□□□□ 0.57
HMGXB3-206ENST00000613459 PNMA3Q9UL41 463 aa18.62■□□□□ 0.57
HMGXB3-206ENST00000613459 APOBEC2Q9Y235 224 aaKnown RBP18.62■□□□□ 0.57
HMGXB3-206ENST00000613459 ZRANB2O95218 330 aaKnown RBP eCLIP18.61■□□□□ 0.57
HMGXB3-206ENST00000613459 SOX5P35711 763 aa18.61■□□□□ 0.57
HMGXB3-206ENST00000613459 TSTA3Q13630 321 aaPredicted RBP18.61■□□□□ 0.57
HMGXB3-206ENST00000613459 TOGARAM2Q6ZUX3 1019 aa18.61■□□□□ 0.57
HMGXB3-206ENST00000613459 XXYLT1Q8NBI6 393 aa18.61■□□□□ 0.57
HMGXB3-206ENST00000613459 ADAM22Q9P0K1 906 aa18.61■□□□□ 0.57
HMGXB3-206ENST00000613459 INTUQ9ULD6 942 aa18.61■□□□□ 0.57
HMGXB3-206ENST00000613459 GYG2O15488 501 aa18.61■□□□□ 0.57
HMGXB3-206ENST00000613459 CFLARO15519 480 aa18.61■□□□□ 0.57
HMGXB3-206ENST00000613459 GDF11O95390 407 aa18.61■□□□□ 0.57
HMGXB3-206ENST00000613459 CHRNA3P32297 505 aa18.61■□□□□ 0.57
HMGXB3-206ENST00000613459 C7orf31Q8N865 590 aa18.61■□□□□ 0.57
HMGXB3-206ENST00000613459 EEF2KMTQ96G04 330 aa18.61■□□□□ 0.57
HMGXB3-206ENST00000613459 GCNAQ96QF7 691 aa18.61■□□□□ 0.57
HMGXB3-206ENST00000613459 SUCLA2Q9P2R7 463 aaPredicted RBP18.61■□□□□ 0.57
HMGXB3-206ENST00000613459 USP17L3A6NCW0 530 aa18.61■□□□□ 0.57
HMGXB3-206ENST00000613459 USP17L4A6NCW7 530 aa18.61■□□□□ 0.57
HMGXB3-206ENST00000613459 CHGBP05060 677 aa18.61■□□□□ 0.57
HMGXB3-206ENST00000613459 IREB2P48200 963 aaKnown RBP18.61■□□□□ 0.57
HMGXB3-206ENST00000613459 USP17L1Q7RTZ2 530 aa18.61■□□□□ 0.57
HMGXB3-206ENST00000613459 ADAMTS1Q9UHI8 967 aa18.61■□□□□ 0.57
HMGXB3-206ENST00000613459 ZBTB5O15062 677 aa18.61■□□□□ 0.57
HMGXB3-206ENST00000613459 ARHGDIAP52565 204 aa18.61■□□□□ 0.57
HMGXB3-206ENST00000613459 KRT76Q01546 638 aa18.61■□□□□ 0.57
HMGXB3-206ENST00000613459 ALX1Q15699 326 aa18.61■□□□□ 0.57
HMGXB3-206ENST00000613459 HP1BP3Q5SSJ5 553 aaPredicted RBP18.61■□□□□ 0.57
HMGXB3-206ENST00000613459 RTKN2Q8IZC4 609 aa18.61■□□□□ 0.57
HMGXB3-206ENST00000613459 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP18.61■□□□□ 0.57
HMGXB3-206ENST00000613459 SAYSD1Q9NPB0 183 aa18.61■□□□□ 0.57
HMGXB3-206ENST00000613459 SEC31BQ9NQW1 1179 aa18.61■□□□□ 0.57
HMGXB3-206ENST00000613459 ADAM21Q9UKJ8 722 aa18.61■□□□□ 0.57
HMGXB3-206ENST00000613459 BHMT2Q9H2M3 363 aa18.6■□□□□ 0.57
HMGXB3-206ENST00000613459 DDX56Q9NY93 547 aaKnown RBP18.6■□□□□ 0.57
HMGXB3-206ENST00000613459 ZNF212Q9UDV6 495 aa18.6■□□□□ 0.57
HMGXB3-206ENST00000613459 CNOT8Q9UFF9 292 aaKnown RBP18.6■□□□□ 0.57
HMGXB3-206ENST00000613459 ZFP69BQ9UJL9 534 aa18.6■□□□□ 0.57
HMGXB3-206ENST00000613459 CLRN2A0PK11 232 aa18.6■□□□□ 0.57
HMGXB3-206ENST00000613459 SPDYE2BA6NHP3 402 aa18.6■□□□□ 0.57
HMGXB3-206ENST00000613459 USP17L8P0C7I0 530 aa18.6■□□□□ 0.57
HMGXB3-206ENST00000613459 SPDYE6P0CI01 402 aa18.6■□□□□ 0.57
HMGXB3-206ENST00000613459 SFNP31947 248 aa18.6■□□□□ 0.57
HMGXB3-206ENST00000613459 AP3M2P53677 418 aa18.6■□□□□ 0.57
HMGXB3-206ENST00000613459 CYP27A1Q02318 531 aa18.6■□□□□ 0.57
HMGXB3-206ENST00000613459 RASGRF1Q13972 1273 aa18.6■□□□□ 0.57
HMGXB3-206ENST00000613459 TRIP13Q15645 432 aaPredicted RBP18.6■□□□□ 0.57
HMGXB3-206ENST00000613459 SLITRK6Q9H5Y7 841 aa18.6■□□□□ 0.57
HMGXB3-206ENST00000613459 PALMO75781 387 aa18.6■□□□□ 0.57
HMGXB3-206ENST00000613459 ASNSP08243 561 aa18.6■□□□□ 0.57
HMGXB3-206ENST00000613459 OCRLQ01968 901 aa18.6■□□□□ 0.57
HMGXB3-206ENST00000613459 ZBTB33Q86T24 672 aa18.6■□□□□ 0.57
HMGXB3-206ENST00000613459 FTOQ9C0B1 505 aaKnown RBP eCLIP18.6■□□□□ 0.57
HMGXB3-206ENST00000613459 TOPORSQ9NS56 1045 aaPredicted RBP18.6■□□□□ 0.57
HMGXB3-206ENST00000613459 WDR91A4D1P6 747 aa18.6■□□□□ 0.57
HMGXB3-206ENST00000613459 SASH1O94885 1247 aa18.6■□□□□ 0.57
HMGXB3-206ENST00000613459 NR3C1P04150 777 aa18.6■□□□□ 0.57
HMGXB3-206ENST00000613459 MKRN3Q13064 507 aaKnown RBP18.6■□□□□ 0.57
HMGXB3-206ENST00000613459 NAA30Q147X3 362 aaPredicted RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms