RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 MUTP22033 750 aa19.31■□□□□ 0.68
SHKBP1-212ENST00000596163 POLGP54098 1239 aaPredicted RBP19.31■□□□□ 0.68
SHKBP1-212ENST00000596163 ZNF697Q5TEC3 545 aa19.31■□□□□ 0.68
SHKBP1-212ENST00000596163 PLA2G4FQ68DD2 849 aa19.31■□□□□ 0.68
SHKBP1-212ENST00000596163 LRRC71Q8N4P6 559 aa19.31■□□□□ 0.68
SHKBP1-212ENST00000596163 NACC1Q96RE7 527 aa19.31■□□□□ 0.68
SHKBP1-212ENST00000596163 FTHL17Q9BXU8 183 aa19.31■□□□□ 0.68
SHKBP1-212ENST00000596163 ZSCAN16Q9H4T2 348 aaPredicted RBP19.31■□□□□ 0.68
SHKBP1-212ENST00000596163 WRAP73Q9P2S5 460 aaPredicted RBP19.31■□□□□ 0.68
SHKBP1-212ENST00000596163 MYH9P35579 1960 aaKnown RBP19.3■□□□□ 0.68
SHKBP1-212ENST00000596163 TMEM150BA6NC51 233 aa19.3■□□□□ 0.68
SHKBP1-212ENST00000596163 GRXCR1A8MXD5 290 aa19.3■□□□□ 0.68
SHKBP1-212ENST00000596163 GPR182O15218 404 aa19.3■□□□□ 0.68
SHKBP1-212ENST00000596163 STX6O43752 255 aa19.3■□□□□ 0.68
SHKBP1-212ENST00000596163 VTNP04004 478 aa19.3■□□□□ 0.68
SHKBP1-212ENST00000596163 RPA1P27694 616 aa19.3■□□□□ 0.68
SHKBP1-212ENST00000596163 NPEPPSP55786 919 aa19.3■□□□□ 0.68
SHKBP1-212ENST00000596163 ATP2C1P98194 919 aaPredicted RBP19.3■□□□□ 0.68
SHKBP1-212ENST00000596163 PAK2Q13177 524 aa19.3■□□□□ 0.68
SHKBP1-212ENST00000596163 ARL6IP4Q66PJ3 421 aaKnown RBP19.3■□□□□ 0.68
SHKBP1-212ENST00000596163 FERMT3Q86UX7 667 aa19.3■□□□□ 0.68
SHKBP1-212ENST00000596163 CATSPER3Q86XQ3 398 aa19.3■□□□□ 0.68
SHKBP1-212ENST00000596163 HERC6Q8IVU3 1022 aa19.3■□□□□ 0.68
SHKBP1-212ENST00000596163 SCLT1Q96NL6 688 aa19.3■□□□□ 0.68
SHKBP1-212ENST00000596163 CEP89Q96ST8 783 aa19.3■□□□□ 0.68
SHKBP1-212ENST00000596163 ZBED2Q9BTP6 218 aa19.3■□□□□ 0.68
SHKBP1-212ENST00000596163 PCDHA11Q9Y5I1 949 aa19.3■□□□□ 0.68
SHKBP1-212ENST00000596163 RPS6KA5O75582 802 aa19.29■□□□□ 0.68
SHKBP1-212ENST00000596163 DNAJB2P25686 324 aa19.29■□□□□ 0.68
SHKBP1-212ENST00000596163 CD52P31358 61 aa19.29■□□□□ 0.68
SHKBP1-212ENST00000596163 NLRP11P59045 1033 aaKnown RBP19.29■□□□□ 0.68
SHKBP1-212ENST00000596163 KIZQ2M2Z5 673 aa19.29■□□□□ 0.68
SHKBP1-212ENST00000596163 IGSF22Q8N9C0 903 aa19.29■□□□□ 0.68
SHKBP1-212ENST00000596163 TCP11Q8WWU5 503 aa19.29■□□□□ 0.68
SHKBP1-212ENST00000596163 TIFAQ96CG3 184 aa19.29■□□□□ 0.68
SHKBP1-212ENST00000596163 SH2D3AQ9BRG2 576 aa19.29■□□□□ 0.68
SHKBP1-212ENST00000596163 PBX4Q9BYU1 374 aa19.29■□□□□ 0.68
SHKBP1-212ENST00000596163 SUCLA2Q9P2R7 463 aaPredicted RBP19.29■□□□□ 0.68
SHKBP1-212ENST00000596163 GPR32O75388 356 aa19.28■□□□□ 0.68
SHKBP1-212ENST00000596163 SPATA31C1P0DKV0 1188 aa19.28■□□□□ 0.68
SHKBP1-212ENST00000596163 CCT6AP40227 531 aaKnown RBP19.28■□□□□ 0.68
SHKBP1-212ENST00000596163 TCTN1Q2MV58 587 aa19.28■□□□□ 0.68
SHKBP1-212ENST00000596163 KRT79Q5XKE5 535 aa19.28■□□□□ 0.68
SHKBP1-212ENST00000596163 DEFB123Q8N688 67 aa19.28■□□□□ 0.68
SHKBP1-212ENST00000596163 NLRP7Q8WX94 980 aa19.28■□□□□ 0.68
SHKBP1-212ENST00000596163 OSBPL7Q9BZF2 842 aa19.28■□□□□ 0.68
SHKBP1-212ENST00000596163 DHX33Q9H6R0 707 aaKnown RBP19.28■□□□□ 0.68
SHKBP1-212ENST00000596163 AGO3Q9H9G7 860 aaKnown RBP19.28■□□□□ 0.68
SHKBP1-212ENST00000596163 PADI3Q9ULW8 664 aa19.28■□□□□ 0.68
SHKBP1-212ENST00000596163 MTMR6Q9Y217 621 aa19.28■□□□□ 0.68
SHKBP1-212ENST00000596163 SCN5AQ14524 2016 aa19.28■□□□□ 0.68
SHKBP1-212ENST00000596163 ASAP2O43150 1006 aa19.27■□□□□ 0.68
SHKBP1-212ENST00000596163 MED24O75448 989 aa19.27■□□□□ 0.68
SHKBP1-212ENST00000596163 DGAT1O75907 488 aa19.27■□□□□ 0.68
SHKBP1-212ENST00000596163 GPC3P51654 580 aa19.27■□□□□ 0.68
SHKBP1-212ENST00000596163 NFX1Q12986 1120 aaKnown RBP19.27■□□□□ 0.68
SHKBP1-212ENST00000596163 ZNF410Q86VK4 478 aa19.27■□□□□ 0.68
SHKBP1-212ENST00000596163 MYOCDQ8IZQ8 938 aa19.27■□□□□ 0.68
SHKBP1-212ENST00000596163 OSMRQ99650 979 aa19.27■□□□□ 0.68
SHKBP1-212ENST00000596163 MTRQ99707 1265 aa19.27■□□□□ 0.68
SHKBP1-212ENST00000596163 GCOM2Q9BZD3 368 aaPredicted RBP19.27■□□□□ 0.68
SHKBP1-212ENST00000596163 INO80BQ9C086 356 aaPredicted RBP19.27■□□□□ 0.68
SHKBP1-212ENST00000596163 ADAMTS10Q9H324 1103 aa19.27■□□□□ 0.68
SHKBP1-212ENST00000596163 SLC28A3Q9HAS3 691 aa19.27■□□□□ 0.68
SHKBP1-212ENST00000596163 CDHR5Q9HBB8 845 aa19.27■□□□□ 0.68
SHKBP1-212ENST00000596163 RNF216Q9NWF9 866 aaPredicted RBP19.27■□□□□ 0.68
SHKBP1-212ENST00000596163 DBR1Q9UK59 544 aaKnown RBP19.27■□□□□ 0.68
SHKBP1-212ENST00000596163 NOC2LQ9Y3T9 749 aaKnown RBP19.27■□□□□ 0.68
SHKBP1-212ENST00000596163 ENPP3O14638 875 aa19.26■□□□□ 0.67
SHKBP1-212ENST00000596163 ZBTB39O15060 712 aa19.26■□□□□ 0.67
SHKBP1-212ENST00000596163 TLL1O43897 1013 aa19.26■□□□□ 0.67
SHKBP1-212ENST00000596163 EIF4BP23588 611 aaKnown RBP19.26■□□□□ 0.67
SHKBP1-212ENST00000596163 PBX2P40425 430 aa19.26■□□□□ 0.67
SHKBP1-212ENST00000596163 RABGGTBP53611 331 aa19.26■□□□□ 0.67
SHKBP1-212ENST00000596163 DEFB103AP81534 67 aa19.26■□□□□ 0.67
SHKBP1-212ENST00000596163 RESTQ13127 1097 aa19.26■□□□□ 0.67
SHKBP1-212ENST00000596163 MKRN4PQ13434 485 aaPredicted RBP19.26■□□□□ 0.67
SHKBP1-212ENST00000596163 EMC2Q15006 297 aa19.26■□□□□ 0.67
SHKBP1-212ENST00000596163 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.26■□□□□ 0.67
SHKBP1-212ENST00000596163 RHPN2Q8IUC4 686 aa19.26■□□□□ 0.67
SHKBP1-212ENST00000596163 KCTD17Q8N5Z5 321 aa19.26■□□□□ 0.67
SHKBP1-212ENST00000596163 ZNF579Q8NAF0 562 aaKnown RBP19.26■□□□□ 0.67
SHKBP1-212ENST00000596163 SNX29Q8TEQ0 813 aa19.26■□□□□ 0.67
SHKBP1-212ENST00000596163 PIGOQ8TEQ8 1089 aa19.26■□□□□ 0.67
SHKBP1-212ENST00000596163 PSPC1Q8WXF1 523 aaKnown RBP19.26■□□□□ 0.67
SHKBP1-212ENST00000596163 PPP1R16BQ96T49 567 aa19.26■□□□□ 0.67
SHKBP1-212ENST00000596163 RAD9AQ99638 391 aa19.26■□□□□ 0.67
SHKBP1-212ENST00000596163 ATP6V0A4Q9HBG4 840 aa19.26■□□□□ 0.67
SHKBP1-212ENST00000596163 ST3GAL5Q9UNP4 418 aa19.26■□□□□ 0.67
SHKBP1-212ENST00000596163 GJB5O95377 273 aa19.25■□□□□ 0.67
SHKBP1-212ENST00000596163 RARRES1P49788 294 aa19.25■□□□□ 0.67
SHKBP1-212ENST00000596163 BECN1Q14457 450 aa19.25■□□□□ 0.67
SHKBP1-212ENST00000596163 SF3A1Q15459 793 aaKnown RBP19.25■□□□□ 0.67
SHKBP1-212ENST00000596163 TOP1MTQ969P6 601 aa19.25■□□□□ 0.67
SHKBP1-212ENST00000596163 AK8Q96MA6 479 aa19.25■□□□□ 0.67
SHKBP1-212ENST00000596163 SEMA6BQ9H3T3 888 aa19.25■□□□□ 0.67
SHKBP1-212ENST00000596163 ERVK-5Q9HDB9 667 aa19.25■□□□□ 0.67
SHKBP1-212ENST00000596163 COL4A3BPQ9Y5P4 624 aa19.25■□□□□ 0.67
SHKBP1-212ENST00000596163 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.24■□□□□ 0.67
SHKBP1-212ENST00000596163 ARHGEF35A5YM69 484 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms