RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 TMEM63BQ5T3F8 832 aa12.59□□□□□ -0.39
SMAD4-205ENST00000588745 CCDC186Q7Z3E2 898 aa12.59□□□□□ -0.39
SMAD4-205ENST00000588745 ZC3H3Q8IXZ2 948 aaKnown RBP12.59□□□□□ -0.39
SMAD4-205ENST00000588745 MCPH1Q8NEM0 835 aa12.59□□□□□ -0.39
SMAD4-205ENST00000588745 SOCS4Q8WXH5 440 aa12.59□□□□□ -0.39
SMAD4-205ENST00000588745 USP6NLQ92738 828 aa12.59□□□□□ -0.39
SMAD4-205ENST00000588745 FAM167AQ96KS9 214 aa12.59□□□□□ -0.39
SMAD4-205ENST00000588745 SPATA33Q96N06 139 aa12.59□□□□□ -0.39
SMAD4-205ENST00000588745 ABHD16BQ9H3Z7 469 aa12.59□□□□□ -0.39
SMAD4-205ENST00000588745 AZI2Q9H6S1 392 aa12.59□□□□□ -0.39
SMAD4-205ENST00000588745 ATP6V0A4Q9HBG4 840 aa12.59□□□□□ -0.39
SMAD4-205ENST00000588745 TYW1Q9NV66 732 aaKnown RBP12.59□□□□□ -0.39
SMAD4-205ENST00000588745 TAB2Q9NYJ8 693 aa12.59□□□□□ -0.39
SMAD4-205ENST00000588745 IMPACTQ9P2X3 320 aa12.59□□□□□ -0.39
SMAD4-205ENST00000588745 NRBP1Q9UHY1 535 aa12.59□□□□□ -0.39
SMAD4-205ENST00000588745 TRAF3IP3Q9Y228 551 aa12.59□□□□□ -0.39
SMAD4-205ENST00000588745 ZMYM2Q9UBW7 1377 aa12.59□□□□□ -0.39
SMAD4-205ENST00000588745 K7ENM7 598 aa12.58□□□□□ -0.4
SMAD4-205ENST00000588745 PDXKO00764 312 aa12.58□□□□□ -0.4
SMAD4-205ENST00000588745 TNPO2O14787 897 aaKnown RBP12.58□□□□□ -0.4
SMAD4-205ENST00000588745 CALUO43852 315 aaPredicted RBP12.58□□□□□ -0.4
SMAD4-205ENST00000588745 PPP1R37O75864 691 aa12.58□□□□□ -0.4
SMAD4-205ENST00000588745 ECM2O94769 699 aaPredicted RBP12.58□□□□□ -0.4
SMAD4-205ENST00000588745 PTGS1P23219 599 aa12.58□□□□□ -0.4
SMAD4-205ENST00000588745 HOXD13P35453 343 aa12.58□□□□□ -0.4
SMAD4-205ENST00000588745 RGS2P41220 211 aa12.58□□□□□ -0.4
SMAD4-205ENST00000588745 FKBP3Q00688 224 aaKnown RBP12.58□□□□□ -0.4
SMAD4-205ENST00000588745 IRF5Q13568 498 aa12.58□□□□□ -0.4
SMAD4-205ENST00000588745 ACVR2BQ13705 512 aa12.58□□□□□ -0.4
SMAD4-205ENST00000588745 LAMC2Q13753 1193 aa12.58□□□□□ -0.4
SMAD4-205ENST00000588745 EMC2Q15006 297 aa12.58□□□□□ -0.4
SMAD4-205ENST00000588745 FAM102BQ5T8I3 360 aa12.58□□□□□ -0.4
SMAD4-205ENST00000588745 PLPPR4Q7Z2D5 763 aa12.58□□□□□ -0.4
SMAD4-205ENST00000588745 ZNF720Q7Z2F6 126 aa12.58□□□□□ -0.4
SMAD4-205ENST00000588745 FILIP1Q7Z7B0 1213 aa12.58□□□□□ -0.4
SMAD4-205ENST00000588745 KIFAP3Q92845 792 aa12.58□□□□□ -0.4
SMAD4-205ENST00000588745 EMID1Q96A84 441 aaPredicted RBP12.58□□□□□ -0.4
SMAD4-205ENST00000588745 CAPNS2Q96L46 248 aa12.58□□□□□ -0.4
SMAD4-205ENST00000588745 CEP63Q96MT8 703 aa12.58□□□□□ -0.4
SMAD4-205ENST00000588745 APBA2Q99767 749 aa12.58□□□□□ -0.4
SMAD4-205ENST00000588745 STRA6Q9BX79 667 aa12.58□□□□□ -0.4
SMAD4-205ENST00000588745 NIFKQ9BYG3 293 aaKnown RBP12.58□□□□□ -0.4
SMAD4-205ENST00000588745 GPRC5CQ9NQ84 441 aa12.58□□□□□ -0.4
SMAD4-205ENST00000588745 RTN4Q9NQC3 1192 aaKnown RBP12.58□□□□□ -0.4
SMAD4-205ENST00000588745 XPNPEP1Q9NQW7 623 aa12.58□□□□□ -0.4
SMAD4-205ENST00000588745 CREBZFQ9NS37 354 aa12.58□□□□□ -0.4
SMAD4-205ENST00000588745 ZHX1Q9UKY1 873 aaPredicted RBP12.58□□□□□ -0.4
SMAD4-205ENST00000588745 ZSWIM8A7E2V4 1837 aa12.57□□□□□ -0.4
SMAD4-205ENST00000588745 N4BP3O15049 544 aa12.57□□□□□ -0.4
SMAD4-205ENST00000588745 SLC26A2P50443 739 aa12.57□□□□□ -0.4
SMAD4-205ENST00000588745 POLGP54098 1239 aaPredicted RBP12.57□□□□□ -0.4
SMAD4-205ENST00000588745 NCKAP1LP55160 1127 aa12.57□□□□□ -0.4
SMAD4-205ENST00000588745 GSDMDP57764 484 aa12.57□□□□□ -0.4
SMAD4-205ENST00000588745 RTP1P59025 263 aa12.57□□□□□ -0.4
SMAD4-205ENST00000588745 DEFB115Q30KQ5 88 aa12.57□□□□□ -0.4
SMAD4-205ENST00000588745 ZC2HC1CQ53FD0 456 aaPredicted RBP12.57□□□□□ -0.4
SMAD4-205ENST00000588745 TRIM50Q86XT4 487 aa12.57□□□□□ -0.4
SMAD4-205ENST00000588745 CREBRFQ8IUR6 639 aa12.57□□□□□ -0.4
SMAD4-205ENST00000588745 REM2Q8IYK8 340 aaPredicted RBP12.57□□□□□ -0.4
SMAD4-205ENST00000588745 SLC17A8Q8NDX2 589 aa12.57□□□□□ -0.4
SMAD4-205ENST00000588745 GLG1Q92896 1179 aa12.57□□□□□ -0.4
SMAD4-205ENST00000588745 EEF2KMTQ96G04 330 aa12.57□□□□□ -0.4
SMAD4-205ENST00000588745 VPS16Q9H269 839 aa12.57□□□□□ -0.4
SMAD4-205ENST00000588745 ST6GALNAC4Q9H4F1 302 aa12.57□□□□□ -0.4
SMAD4-205ENST00000588745 C17orf75Q9HAS0 396 aa12.57□□□□□ -0.4
SMAD4-205ENST00000588745 PDLIM7Q9NR12 457 aa12.57□□□□□ -0.4
SMAD4-205ENST00000588745 NRBP2Q9NSY0 501 aa12.57□□□□□ -0.4
SMAD4-205ENST00000588745 PPME1Q9Y570 386 aa12.57□□□□□ -0.4
SMAD4-205ENST00000588745 PCDHB13Q9Y5F0 798 aa12.57□□□□□ -0.4
SMAD4-205ENST00000588745 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.57□□□□□ -0.44e-6■□□□□ 8.8
SMAD4-205ENST00000588745 DOCK3Q8IZD9 2030 aa12.57□□□□□ -0.4
SMAD4-205ENST00000588745 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.56□□□□□ -0.4
SMAD4-205ENST00000588745 LGALS16A8MUM7 142 aa12.56□□□□□ -0.4
SMAD4-205ENST00000588745 NKRFO15226 690 aaKnown RBP eCLIP12.56□□□□□ -0.4
SMAD4-205ENST00000588745 TEX33O43247 280 aa12.56□□□□□ -0.4
SMAD4-205ENST00000588745 AOC2O75106 756 aa12.56□□□□□ -0.4
SMAD4-205ENST00000588745 TPM2P07951 284 aa12.56□□□□□ -0.4
SMAD4-205ENST00000588745 PBX1P40424 430 aa12.56□□□□□ -0.4
SMAD4-205ENST00000588745 RFC5P40937 340 aa12.56□□□□□ -0.4
SMAD4-205ENST00000588745 MTIF2P46199 727 aaKnown RBP12.56□□□□□ -0.4
SMAD4-205ENST00000588745 APLP1P51693 650 aa12.56□□□□□ -0.4
SMAD4-205ENST00000588745 KCNA1Q09470 495 aa12.56□□□□□ -0.4
SMAD4-205ENST00000588745 DMP1Q13316 513 aaPredicted RBP12.56□□□□□ -0.4
SMAD4-205ENST00000588745 TARBP2Q15633 366 aaKnown RBP12.56□□□□□ -0.4
SMAD4-205ENST00000588745 PTPN21Q16825 1174 aa12.56□□□□□ -0.4
SMAD4-205ENST00000588745 DUSP28Q4G0W2 176 aa12.56□□□□□ -0.4
SMAD4-205ENST00000588745 GJC2Q5T442 439 aaPredicted RBP12.56□□□□□ -0.4
SMAD4-205ENST00000588745 OLFML2BQ68BL8 750 aa12.56□□□□□ -0.4
SMAD4-205ENST00000588745 SPECC1LQ69YQ0 1117 aa12.56□□□□□ -0.4
SMAD4-205ENST00000588745 ZSCAN30Q86W11 494 aa12.56□□□□□ -0.4
SMAD4-205ENST00000588745 PPTC7Q8NI37 304 aa12.56□□□□□ -0.4
SMAD4-205ENST00000588745 ATP8B4Q8TF62 1192 aa12.56□□□□□ -0.4
SMAD4-205ENST00000588745 SPIRE2Q8WWL2 714 aa12.56□□□□□ -0.4
SMAD4-205ENST00000588745 BBXQ8WY36 941 aaPredicted RBP12.56□□□□□ -0.4
SMAD4-205ENST00000588745 CEP89Q96ST8 783 aa12.56□□□□□ -0.4
SMAD4-205ENST00000588745 TUBGCP2Q9BSJ2 902 aa12.56□□□□□ -0.4
SMAD4-205ENST00000588745 KCNF1Q9H3M0 494 aa12.56□□□□□ -0.4
SMAD4-205ENST00000588745 DHX33Q9H6R0 707 aaKnown RBP12.56□□□□□ -0.4
SMAD4-205ENST00000588745 FLRT1Q9NZU1 646 aa12.56□□□□□ -0.4
SMAD4-205ENST00000588745 GJD2Q9UKL4 321 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms