RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 ZCCHC17Q9NP64 241 aaKnown RBP31.32■■■□□ 2.6
CTDNEP1-210ENST00000574322 LARSQ9P2J5 1176 aaKnown RBP31.32■■■□□ 2.6
CTDNEP1-210ENST00000574322 FAM184BQ9ULE4 1060 aa31.32■■■□□ 2.6
CTDNEP1-210ENST00000574322 SIK3Q9Y2K2 1263 aa31.32■■■□□ 2.6
CTDNEP1-210ENST00000574322 LUC7L2Q9Y383 392 aaKnown RBP31.32■■■□□ 2.6
CTDNEP1-210ENST00000574322 KIF2AO00139 706 aaPredicted RBP31.31■■■□□ 2.6
CTDNEP1-210ENST00000574322 TGFB1I1O43294 461 aa31.31■■■□□ 2.6
CTDNEP1-210ENST00000574322 ATG7O95352 703 aa31.31■■■□□ 2.6
CTDNEP1-210ENST00000574322 TUBB4AP04350 444 aa31.31■■■□□ 2.6
CTDNEP1-210ENST00000574322 ACTR2P61160 394 aa31.31■■■□□ 2.6
CTDNEP1-210ENST00000574322 FRMD5Q7Z6J6 570 aa31.31■■■□□ 2.6
CTDNEP1-210ENST00000574322 TMTC1Q8IUR5 882 aa31.31■■■□□ 2.6
CTDNEP1-210ENST00000574322 ZMYM2Q9UBW7 1377 aa31.31■■■□□ 2.6
CTDNEP1-210ENST00000574322 LOC102724159A0A0B4J2E5 919 aa31.3■■■□□ 2.6
CTDNEP1-210ENST00000574322 ZSCAN12O43309 604 aa31.3■■■□□ 2.6
CTDNEP1-210ENST00000574322 SP2Q02086 613 aa31.3■■■□□ 2.6
CTDNEP1-210ENST00000574322 PWP2Q15269 919 aaKnown RBP31.3■■■□□ 2.6
CTDNEP1-210ENST00000574322 PTPN14Q15678 1187 aa31.3■■■□□ 2.6
CTDNEP1-210ENST00000574322 ANO5Q75V66 913 aa31.3■■■□□ 2.6
CTDNEP1-210ENST00000574322 OTUD6AQ7L8S5 288 aa31.3■■■□□ 2.6
CTDNEP1-210ENST00000574322 OR8K1Q8NGG5 319 aa31.3■■■□□ 2.6
CTDNEP1-210ENST00000574322 GABBR1Q9UBS5 961 aa31.3■■■□□ 2.6
CTDNEP1-210ENST00000574322 BACH1O14867 736 aa31.29■■■□□ 2.6
CTDNEP1-210ENST00000574322 SLC16A3O15427 465 aaKnown RBP31.29■■■□□ 2.6
CTDNEP1-210ENST00000574322 TGFB3P10600 412 aa31.29■■■□□ 2.6
CTDNEP1-210ENST00000574322 CYP2C8P10632 490 aa31.29■■■□□ 2.6
CTDNEP1-210ENST00000574322 TNNT1P13805 278 aa31.29■■■□□ 2.6
CTDNEP1-210ENST00000574322 MIS18BP1Q6P0N0 1132 aa31.29■■■□□ 2.6
CTDNEP1-210ENST00000574322 PRIMPOLQ96LW4 560 aa31.29■■■□□ 2.6
CTDNEP1-210ENST00000574322 DRC1Q96MC2 740 aa31.29■■■□□ 2.6
CTDNEP1-210ENST00000574322 MPHOSPH6Q99547 160 aaKnown RBP31.29■■■□□ 2.6
CTDNEP1-210ENST00000574322 ST6GALNAC4Q9H4F1 302 aa31.29■■■□□ 2.6
CTDNEP1-210ENST00000574322 DOCK5Q9H7D0 1870 aa31.29■■■□□ 2.6
CTDNEP1-210ENST00000574322 ZNF862O60290 1169 aa31.29■■■□□ 2.6
CTDNEP1-210ENST00000574322 NR3C1P04150 777 aa31.29■■■□□ 2.6
CTDNEP1-210ENST00000574322 PLS3P13797 630 aa31.29■■■□□ 2.6
CTDNEP1-210ENST00000574322 PPP2R3AQ06190 1150 aa31.29■■■□□ 2.6
CTDNEP1-210ENST00000574322 KCNA1Q09470 495 aa31.29■■■□□ 2.6
CTDNEP1-210ENST00000574322 CCDC43Q96MW1 224 aaKnown RBP31.29■■■□□ 2.6
CTDNEP1-210ENST00000574322 PARK7Q99497 189 aaKnown RBP31.29■■■□□ 2.6
CTDNEP1-210ENST00000574322 R3HDMLQ9H3Y0 253 aa31.29■■■□□ 2.6
CTDNEP1-210ENST00000574322 PPP2R2CQ9Y2T4 447 aa31.29■■■□□ 2.6
CTDNEP1-210ENST00000574322 R3HCC1Q9Y3T6 440 aaKnown RBP31.29■■■□□ 2.6
CTDNEP1-210ENST00000574322 THSD7BQ9C0I4 1608 aa31.28■■■□□ 2.6
CTDNEP1-210ENST00000574322 ALDH1A1P00352 501 aa31.28■■■□□ 2.6
CTDNEP1-210ENST00000574322 SUPT20HL2P0C7V6 817 aa31.28■■■□□ 2.6
CTDNEP1-210ENST00000574322 ERVK-9P63128 1117 aa31.28■■■□□ 2.6
CTDNEP1-210ENST00000574322 ERVK-24P63145 666 aa31.28■■■□□ 2.6
CTDNEP1-210ENST00000574322 TAF1CQ15572 869 aaPredicted RBP31.28■■■□□ 2.6
CTDNEP1-210ENST00000574322 XKR9Q5GH70 373 aa31.28■■■□□ 2.6
CTDNEP1-210ENST00000574322 REXO1L1PQ8IX06 675 aa31.28■■■□□ 2.6
CTDNEP1-210ENST00000574322 TMEM174Q8WUU8 243 aa31.28■■■□□ 2.6
CTDNEP1-210ENST00000574322 FGD4Q96M96 766 aa31.28■■■□□ 2.6
CTDNEP1-210ENST00000574322 IGSF9BQ9UPX0 1349 aa31.27■■■□□ 2.6
CTDNEP1-210ENST00000574322 TRIM21P19474 475 aaKnown RBP31.27■■■□□ 2.6
CTDNEP1-210ENST00000574322 ZBED6P86452 979 aa31.27■■■□□ 2.6
CTDNEP1-210ENST00000574322 ZC2HC1CQ53FD0 456 aaPredicted RBP31.27■■■□□ 2.6
CTDNEP1-210ENST00000574322 CYP26C1Q6V0L0 522 aa31.27■■■□□ 2.6
CTDNEP1-210ENST00000574322 SLC17A8Q8NDX2 589 aa31.27■■■□□ 2.6
CTDNEP1-210ENST00000574322 SMCR8Q8TEV9 937 aaPredicted RBP31.27■■■□□ 2.6
CTDNEP1-210ENST00000574322 USO1O60763 962 aaKnown RBP31.27■■■□□ 2.6
CTDNEP1-210ENST00000574322 KCTD2Q14681 263 aa31.27■■■□□ 2.6
CTDNEP1-210ENST00000574322 UTP14CQ5TAP6 766 aaKnown RBP31.27■■■□□ 2.6
CTDNEP1-210ENST00000574322 SWSAP1Q6NVH7 229 aa31.27■■■□□ 2.6
CTDNEP1-210ENST00000574322 GOLGA5Q8TBA6 731 aa31.27■■■□□ 2.6
CTDNEP1-210ENST00000574322 MORC4Q8TE76 937 aa31.27■■■□□ 2.6
CTDNEP1-210ENST00000574322 EDEM3Q9BZQ6 932 aa31.27■■■□□ 2.6
CTDNEP1-210ENST00000574322 METTL14Q9HCE5 456 aaKnown RBP31.27■■■□□ 2.6
CTDNEP1-210ENST00000574322 UTP18Q9Y5J1 556 aaKnown RBP eCLIP31.27■■■□□ 2.6
CTDNEP1-210ENST00000574322 CEP350Q5VT06 3117 aa31.26■■■□□ 2.6
CTDNEP1-210ENST00000574322 GOLGA6L9A6NEM1 432 aa31.26■■■□□ 2.59
CTDNEP1-210ENST00000574322 MYBPC2Q14324 1141 aa31.26■■■□□ 2.59
CTDNEP1-210ENST00000574322 RAD9BQ6WBX8 426 aa31.26■■■□□ 2.59
CTDNEP1-210ENST00000574322 CCDC60Q8IWA6 550 aaPredicted RBP31.26■■■□□ 2.59
CTDNEP1-210ENST00000574322 MMP19Q99542 508 aa31.26■■■□□ 2.59
CTDNEP1-210ENST00000574322 ARID2Q68CP9 1835 aa31.26■■■□□ 2.59
CTDNEP1-210ENST00000574322 SYNGAP1Q96PV0 1343 aa31.25■■■□□ 2.59
CTDNEP1-210ENST00000574322 IGKV6D-21A0A0A0MT36 114 aa31.25■■■□□ 2.59
CTDNEP1-210ENST00000574322 SOWAHDA6NJG2 315 aa31.25■■■□□ 2.59
CTDNEP1-210ENST00000574322 KLK7P49862 253 aa31.25■■■□□ 2.59
CTDNEP1-210ENST00000574322 NPEPPSP55786 919 aa31.25■■■□□ 2.59
CTDNEP1-210ENST00000574322 MEA1Q16626 185 aa31.25■■■□□ 2.59
CTDNEP1-210ENST00000574322 SEPT14Q6ZU15 432 aa31.25■■■□□ 2.59
CTDNEP1-210ENST00000574322 TOGARAM2Q6ZUX3 1019 aa31.25■■■□□ 2.59
CTDNEP1-210ENST00000574322 MKNK1Q9BUB5 465 aa31.25■■■□□ 2.59
CTDNEP1-210ENST00000574322 DMAC2Q9NW81 257 aa31.25■■■□□ 2.59
CTDNEP1-210ENST00000574322 MAFBQ9Y5Q3 323 aaPredicted RBP31.25■■■□□ 2.59
CTDNEP1-210ENST00000574322 TMEM150BA6NC51 233 aa31.24■■■□□ 2.59
CTDNEP1-210ENST00000574322 NEDD9Q14511 834 aa31.24■■■□□ 2.59
CTDNEP1-210ENST00000574322 CYFIP1Q7L576 1253 aa31.24■■■□□ 2.59
CTDNEP1-210ENST00000574322 GBP3Q9H0R5 595 aa31.24■■■□□ 2.59
CTDNEP1-210ENST00000574322 PDLIM7Q9NR12 457 aa31.24■■■□□ 2.59
CTDNEP1-210ENST00000574322 ARMCX3Q9UH62 379 aaPredicted RBP31.24■■■□□ 2.59
CTDNEP1-210ENST00000574322 TELO2Q9Y4R8 837 aa31.24■■■□□ 2.59
CTDNEP1-210ENST00000574322 UBA1P22314 1058 aaKnown RBP31.24■■■□□ 2.59
CTDNEP1-210ENST00000574322 MAP2K1Q02750 393 aaPredicted RBP31.24■■■□□ 2.59
CTDNEP1-210ENST00000574322 PLA2G4FQ68DD2 849 aa31.24■■■□□ 2.59
CTDNEP1-210ENST00000574322 KCNV1Q6PIU1 500 aa31.24■■■□□ 2.59
CTDNEP1-210ENST00000574322 HS2ST1Q7LGA3 356 aa31.24■■■□□ 2.59
CTDNEP1-210ENST00000574322 SLC9A9Q8IVB4 645 aa31.24■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms