RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 PRNPP04156 253 aa7□□□□□ -1.29
SF3B3-214ENST00000572365 SOX5P35711 763 aa7□□□□□ -1.29
SF3B3-214ENST00000572365 IGFALSP35858 605 aa7□□□□□ -1.29
SF3B3-214ENST00000572365 GUCY1A3Q02108 690 aa7□□□□□ -1.29
SF3B3-214ENST00000572365 TBC1D10BQ4KMP7 808 aaPredicted RBP7□□□□□ -1.29
SF3B3-214ENST00000572365 MBLAC2Q68D91 279 aa7□□□□□ -1.29
SF3B3-214ENST00000572365 LBX2Q6XYB7 198 aa7□□□□□ -1.29
SF3B3-214ENST00000572365 PPM1KQ8N3J5 372 aa7□□□□□ -1.29
SF3B3-214ENST00000572365 NAT16Q8N8M0 369 aa7□□□□□ -1.29
SF3B3-214ENST00000572365 RCBTB1Q8NDN9 531 aa7□□□□□ -1.29
SF3B3-214ENST00000572365 BCL7CQ8WUZ0 217 aaPredicted RBP7□□□□□ -1.29
SF3B3-214ENST00000572365 GBA2Q9HCG7 927 aaPredicted RBP7□□□□□ -1.29
SF3B3-214ENST00000572365 PCDHA9Q9Y5H5 950 aa7□□□□□ -1.29
SF3B3-214ENST00000572365 VCANP13611 3396 aa7□□□□□ -1.29
SF3B3-214ENST00000572365 ASTN2O75129 1339 aaPredicted RBP7□□□□□ -1.29
SF3B3-214ENST00000572365 PRAMEF22A3QJZ6 481 aa6.99□□□□□ -1.29
SF3B3-214ENST00000572365 B4E1Z4 1266 aa6.99□□□□□ -1.29
SF3B3-214ENST00000572365 ARVCFO00192 962 aa6.99□□□□□ -1.29
SF3B3-214ENST00000572365 RNMTO43148 476 aaKnown RBP6.99□□□□□ -1.29
SF3B3-214ENST00000572365 PPIP5K2O43314 1243 aa6.99□□□□□ -1.29
SF3B3-214ENST00000572365 KCNQ3O43525 872 aa6.99□□□□□ -1.29
SF3B3-214ENST00000572365 MSCO60682 206 aa6.99□□□□□ -1.29
SF3B3-214ENST00000572365 COBLO75128 1261 aa6.99□□□□□ -1.29
SF3B3-214ENST00000572365 STARD3NLO95772 234 aa6.99□□□□□ -1.29
SF3B3-214ENST00000572365 LCP1P13796 627 aa6.99□□□□□ -1.29
SF3B3-214ENST00000572365 POU3F3P20264 500 aaPredicted RBP6.99□□□□□ -1.29
SF3B3-214ENST00000572365 ANAPC15P60006 121 aa6.99□□□□□ -1.29
SF3B3-214ENST00000572365 BNIP3Q12983 259 aa6.99□□□□□ -1.29
SF3B3-214ENST00000572365 IKZF1Q13422 519 aa6.99□□□□□ -1.29
SF3B3-214ENST00000572365 ZNF460Q14592 562 aa6.99□□□□□ -1.29
SF3B3-214ENST00000572365 INF2Q27J81 1249 aa6.99□□□□□ -1.29
SF3B3-214ENST00000572365 WFDC3Q8IUB2 231 aa6.99□□□□□ -1.29
SF3B3-214ENST00000572365 NGEFQ8N5V2 710 aa6.99□□□□□ -1.29
SF3B3-214ENST00000572365 C2orf69Q8N8R5 385 aa6.99□□□□□ -1.29
SF3B3-214ENST00000572365 LINC01599Q8WXQ3 324 aa6.99□□□□□ -1.29
SF3B3-214ENST00000572365 ZNF496Q96IT1 587 aaPredicted RBP6.99□□□□□ -1.29
SF3B3-214ENST00000572365 HHIPL1Q96JK4 782 aa6.99□□□□□ -1.29
SF3B3-214ENST00000572365 G6PC3Q9BUM1 346 aa6.99□□□□□ -1.29
SF3B3-214ENST00000572365 CNOT7Q9UIV1 285 aaKnown RBP6.99□□□□□ -1.29
SF3B3-214ENST00000572365 EYSQ5T1H1 3165 aa6.99□□□□□ -1.29
SF3B3-214ENST00000572365 PRUNE2Q8WUY3 3088 aa6.99□□□□□ -1.29
SF3B3-214ENST00000572365 OPA1O60313 960 aa6.98□□□□□ -1.29
SF3B3-214ENST00000572365 NPTXRO95502 500 aa6.98□□□□□ -1.29
SF3B3-214ENST00000572365 CD96P40200 585 aa6.98□□□□□ -1.29
SF3B3-214ENST00000572365 HLFQ16534 295 aa6.98□□□□□ -1.29
SF3B3-214ENST00000572365 AMOTQ4VCS5 1084 aa6.98□□□□□ -1.29
SF3B3-214ENST00000572365 ANGEL2Q5VTE6 544 aaKnown RBP6.98□□□□□ -1.29
SF3B3-214ENST00000572365 PRAMEF18Q5VWM3 479 aa6.98□□□□□ -1.29
SF3B3-214ENST00000572365 HLA-DQA1Q5Y7H0 255 aa6.98□□□□□ -1.29
SF3B3-214ENST00000572365 CNNM4Q6P4Q7 775 aa6.98□□□□□ -1.29
SF3B3-214ENST00000572365 SPRED2Q7Z698 418 aa6.98□□□□□ -1.29
SF3B3-214ENST00000572365 MTDHQ86UE4 582 aaKnown RBP6.98□□□□□ -1.29
SF3B3-214ENST00000572365 CPNE8Q86YQ8 564 aa6.98□□□□□ -1.29
SF3B3-214ENST00000572365 RPUSD2Q8IZ73 545 aaKnown RBP6.98□□□□□ -1.29
SF3B3-214ENST00000572365 AHI1Q8N157 1196 aa6.98□□□□□ -1.29
SF3B3-214ENST00000572365 MAP6Q96JE9 813 aa6.98□□□□□ -1.29
SF3B3-214ENST00000572365 CARS2Q9HA77 564 aaKnown RBP6.98□□□□□ -1.29
SF3B3-214ENST00000572365 SAGE1Q9NXZ1 904 aa6.98□□□□□ -1.29
SF3B3-214ENST00000572365 TNFRSF10DQ9UBN6 386 aa6.98□□□□□ -1.29
SF3B3-214ENST00000572365 NIP7Q9Y221 180 aaKnown RBP eCLIP6.98□□□□□ -1.29
SF3B3-214ENST00000572365 SLC5A6Q9Y289 635 aa6.98□□□□□ -1.29
SF3B3-214ENST00000572365 PCDHA8Q9Y5H6 950 aa6.98□□□□□ -1.29
SF3B3-214ENST00000572365 LAMA3Q16787 3333 aa6.98□□□□□ -1.29
SF3B3-214ENST00000572365 NPC1L1Q9UHC9 1359 aa6.97□□□□□ -1.29
SF3B3-214ENST00000572365 C7orf72A4D263 438 aa6.97□□□□□ -1.29
SF3B3-214ENST00000572365 FADS2P1A8MWK0 482 aa6.97□□□□□ -1.29
SF3B3-214ENST00000572365 UBE2Q2LH0YL09 131 aa6.97□□□□□ -1.29
SF3B3-214ENST00000572365 WNT9AO14904 365 aa6.97□□□□□ -1.29
SF3B3-214ENST00000572365 APPP05067 770 aa6.97□□□□□ -1.29
SF3B3-214ENST00000572365 CENPBP07199 599 aaPredicted RBP6.97□□□□□ -1.29
SF3B3-214ENST00000572365 HMOX1P09601 288 aa6.97□□□□□ -1.29
SF3B3-214ENST00000572365 ITGB7P26010 798 aa6.97□□□□□ -1.29
SF3B3-214ENST00000572365 CNGA1P29973 690 aa6.97□□□□□ -1.29
SF3B3-214ENST00000572365 ALDH1B1P30837 517 aa6.97□□□□□ -1.29
SF3B3-214ENST00000572365 FLT3P36888 993 aa6.97□□□□□ -1.29
SF3B3-214ENST00000572365 RBM10P98175 930 aaKnown RBP6.97□□□□□ -1.29
SF3B3-214ENST00000572365 LAPTM5Q13571 262 aa6.97□□□□□ -1.29
SF3B3-214ENST00000572365 KIZQ2M2Z5 673 aa6.97□□□□□ -1.29
SF3B3-214ENST00000572365 FBXO46Q6PJ61 603 aaPredicted RBP6.97□□□□□ -1.29
SF3B3-214ENST00000572365 DTX1Q86Y01 620 aa6.97□□□□□ -1.29
SF3B3-214ENST00000572365 PSMD1Q99460 953 aa6.97□□□□□ -1.29
SF3B3-214ENST00000572365 ORAI3Q9BRQ5 295 aa6.97□□□□□ -1.29
SF3B3-214ENST00000572365 EBF1Q9UH73 591 aa6.97□□□□□ -1.29
SF3B3-214ENST00000572365 PGAP2Q9UHJ9 254 aa6.97□□□□□ -1.29
SF3B3-214ENST00000572365 PCDHA2Q9Y5H9 948 aa6.97□□□□□ -1.29
SF3B3-214ENST00000572365 USP16Q9Y5T5 823 aa6.97□□□□□ -1.29
SF3B3-214ENST00000572365 LAMA2P24043 3122 aaKnown RBP6.97□□□□□ -1.29
SF3B3-214ENST00000572365 BCORQ6W2J9 1755 aa6.97□□□□□ -1.29
SF3B3-214ENST00000572365 KIAA1324LA8MWY0 1029 aaPredicted RBP6.96□□□□□ -1.3
SF3B3-214ENST00000572365 MED26O95402 600 aa6.96□□□□□ -1.3
SF3B3-214ENST00000572365 ZGLP1P0C6A0 271 aa6.96□□□□□ -1.3
SF3B3-214ENST00000572365 CD8BP10966 210 aa6.96□□□□□ -1.3
SF3B3-214ENST00000572365 SPINK2P20155 84 aa6.96□□□□□ -1.3
SF3B3-214ENST00000572365 CD97P48960 835 aa6.96□□□□□ -1.3
SF3B3-214ENST00000572365 ZP2Q05996 745 aa6.96□□□□□ -1.3
SF3B3-214ENST00000572365 DUSP4Q13115 394 aa6.96□□□□□ -1.3
SF3B3-214ENST00000572365 PAK1Q13153 545 aa6.96□□□□□ -1.3
SF3B3-214ENST00000572365 PKN2Q16513 984 aaKnown RBP6.96□□□□□ -1.3
SF3B3-214ENST00000572365 ZCCHC8Q6NZY4 707 aaKnown RBP6.96□□□□□ -1.3
SF3B3-214ENST00000572365 ABHD17CQ6PCB6 329 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms