RNA–Protein interactions for RNA: ENST00000570139.1

CNOT1-222, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-222ENST00000570139 CHTF18Q8WVB6 975 aa8.48□□□□□ -1.05
CNOT1-222ENST00000570139 DIO2Q92813 273 aa8.48□□□□□ -1.05
CNOT1-222ENST00000570139 IL17RAQ96F46 866 aa8.48□□□□□ -1.05
CNOT1-222ENST00000570139 MEIS3Q99687 375 aa8.48□□□□□ -1.05
CNOT1-222ENST00000570139 UBA5Q9GZZ9 404 aa8.48□□□□□ -1.05
CNOT1-222ENST00000570139 CHST12Q9NRB3 414 aa8.48□□□□□ -1.05
CNOT1-222ENST00000570139 SPTLC3Q9NUV7 552 aa8.48□□□□□ -1.05
CNOT1-222ENST00000570139 TAF1LQ8IZX4 1826 aa8.47□□□□□ -1.05
CNOT1-222ENST00000570139 SCN7AQ01118 1682 aa8.47□□□□□ -1.05
CNOT1-222ENST00000570139 TRBV23OR9-2A0A075B6M9 112 aa8.47□□□□□ -1.05
CNOT1-222ENST00000570139 HMGB1P1B2RPK0 211 aaPredicted RBP8.47□□□□□ -1.05
CNOT1-222ENST00000570139 ERVV-1B6SEH8 477 aa8.47□□□□□ -1.05
CNOT1-222ENST00000570139 PIK3R2O00459 728 aa8.47□□□□□ -1.05
CNOT1-222ENST00000570139 MEIS1O00470 390 aa8.47□□□□□ -1.05
CNOT1-222ENST00000570139 WNT9AO14904 365 aa8.47□□□□□ -1.05
CNOT1-222ENST00000570139 IGHDP01880 384 aa8.47□□□□□ -1.05
CNOT1-222ENST00000570139 IFIT2P09913 472 aaKnown RBP8.47□□□□□ -1.05
CNOT1-222ENST00000570139 SLURP2P0DP57 97 aa8.47□□□□□ -1.05
CNOT1-222ENST00000570139 ATP2A2P16615 1042 aaKnown RBP8.47□□□□□ -1.05
CNOT1-222ENST00000570139 PREPP48147 710 aa8.47□□□□□ -1.05
CNOT1-222ENST00000570139 MECP2P51608 486 aaKnown RBP8.47□□□□□ -1.05
CNOT1-222ENST00000570139 ST5P78524 1137 aa8.47□□□□□ -1.05
CNOT1-222ENST00000570139 TRIM28Q13263 835 aaKnown RBP8.47□□□□□ -1.05
CNOT1-222ENST00000570139 PICALMQ13492 652 aa8.47□□□□□ -1.05
CNOT1-222ENST00000570139 ZRSR2Q15696 482 aaKnown RBP8.47□□□□□ -1.05
CNOT1-222ENST00000570139 CLEC16AQ2KHT3 1053 aa8.47□□□□□ -1.05
CNOT1-222ENST00000570139 HSP90AB4PQ58FF6 505 aa8.47□□□□□ -1.05
CNOT1-222ENST00000570139 EEF1DP3Q658K8 133 aa8.47□□□□□ -1.05
CNOT1-222ENST00000570139 CEP85Q6P2H3 762 aa8.47□□□□□ -1.05
CNOT1-222ENST00000570139 KRT27Q7Z3Y8 459 aa8.47□□□□□ -1.05
CNOT1-222ENST00000570139 TPH2Q8IWU9 490 aa8.47□□□□□ -1.05
CNOT1-222ENST00000570139 DNAJC10Q8IXB1 793 aa8.47□□□□□ -1.05
CNOT1-222ENST00000570139 GIMAP7Q8NHV1 300 aa8.47□□□□□ -1.05
CNOT1-222ENST00000570139 SLC16A10Q8TF71 515 aa8.47□□□□□ -1.05
CNOT1-222ENST00000570139 SLC5A5Q92911 643 aa8.47□□□□□ -1.05
CNOT1-222ENST00000570139 CLIP3Q96DZ5 547 aa8.47□□□□□ -1.05
CNOT1-222ENST00000570139 NUP88Q99567 741 aaPredicted RBP8.47□□□□□ -1.05
CNOT1-222ENST00000570139 USP44Q9H0E7 712 aa8.47□□□□□ -1.05
CNOT1-222ENST00000570139 GPRC5CQ9NQ84 441 aa8.47□□□□□ -1.05
CNOT1-222ENST00000570139 PRDM5Q9NQX1 630 aaPredicted RBP8.47□□□□□ -1.05
CNOT1-222ENST00000570139 C9orf78Q9NZ63 289 aaPredicted RBP8.47□□□□□ -1.05
CNOT1-222ENST00000570139 ZNF652Q9Y2D9 606 aa8.47□□□□□ -1.05
CNOT1-222ENST00000570139 CNTNAP4Q9C0A0 1308 aa8.47□□□□□ -1.05
CNOT1-222ENST00000570139 PTPDC1A2A3K4 754 aa8.46□□□□□ -1.06
CNOT1-222ENST00000570139 CCDC66A2RUB6 948 aa8.46□□□□□ -1.06
CNOT1-222ENST00000570139 F8W735 103 aaPredicted RBP8.46□□□□□ -1.06
CNOT1-222ENST00000570139 GRM8O00222 908 aa8.46□□□□□ -1.06
CNOT1-222ENST00000570139 ANXA1P04083 346 aa8.46□□□□□ -1.06
CNOT1-222ENST00000570139 NFICP08651 508 aa8.46□□□□□ -1.06
CNOT1-222ENST00000570139 AIMP1Q12904 312 aaKnown RBP8.46□□□□□ -1.06
CNOT1-222ENST00000570139 MTX1Q13505 466 aa8.46□□□□□ -1.06
CNOT1-222ENST00000570139 DHX8Q14562 1220 aaKnown RBP8.46□□□□□ -1.06
CNOT1-222ENST00000570139 SFRP5Q5T4F7 317 aa8.46□□□□□ -1.06
CNOT1-222ENST00000570139 RCSD1Q6JBY9 416 aa8.46□□□□□ -1.06
CNOT1-222ENST00000570139 CRTC3Q6UUV7 619 aa8.46□□□□□ -1.06
CNOT1-222ENST00000570139 ZNF655Q8N720 491 aaPredicted RBP8.46□□□□□ -1.06
CNOT1-222ENST00000570139 EFHBQ8N7U6 833 aa8.46□□□□□ -1.06
CNOT1-222ENST00000570139 CCDC191Q8NCU4 936 aa8.46□□□□□ -1.06
CNOT1-222ENST00000570139 USP33Q8TEY7 942 aa8.46□□□□□ -1.06
CNOT1-222ENST00000570139 EZH1Q92800 747 aaPredicted RBP8.46□□□□□ -1.06
CNOT1-222ENST00000570139 FBXW5Q969U6 566 aa8.46□□□□□ -1.06
CNOT1-222ENST00000570139 AIFM3Q96NN9 605 aa8.46□□□□□ -1.06
CNOT1-222ENST00000570139 MCMBPQ9BTE3 642 aa8.46□□□□□ -1.06
CNOT1-222ENST00000570139 SARGQ9BW04 601 aa8.46□□□□□ -1.06
CNOT1-222ENST00000570139 RRAGCQ9HB90 399 aa8.46□□□□□ -1.06
CNOT1-222ENST00000570139 ENAMQ9NRM1 1142 aa8.46□□□□□ -1.06
CNOT1-222ENST00000570139 MAP3K15Q6ZN16 1313 aa8.46□□□□□ -1.06
CNOT1-222ENST00000570139 LAMB2P55268 1798 aa8.45□□□□□ -1.06
CNOT1-222ENST00000570139 NUP98P52948 1817 aa8.45□□□□□ -1.06
CNOT1-222ENST00000570139 FAM47E-STBD1D6RA91 191 aa8.45□□□□□ -1.06
CNOT1-222ENST00000570139 EOMESO95936 686 aa8.45□□□□□ -1.06
CNOT1-222ENST00000570139 SOD2P04179 222 aa8.45□□□□□ -1.06
CNOT1-222ENST00000570139 A1BGP04217 495 aa8.45□□□□□ -1.06
CNOT1-222ENST00000570139 RBP3P10745 1247 aa8.45□□□□□ -1.06
CNOT1-222ENST00000570139 PLS3P13797 630 aa8.45□□□□□ -1.06
CNOT1-222ENST00000570139 LORP23490 312 aaPredicted RBP8.45□□□□□ -1.06
CNOT1-222ENST00000570139 RXRBP28702 533 aa8.45□□□□□ -1.06
CNOT1-222ENST00000570139 BMP8BP34820 402 aa8.45□□□□□ -1.06
CNOT1-222ENST00000570139 GRIK1P39086 918 aa8.45□□□□□ -1.06
CNOT1-222ENST00000570139 CTSKP43235 329 aa8.45□□□□□ -1.06
CNOT1-222ENST00000570139 RBM10P98175 930 aaKnown RBP8.45□□□□□ -1.06
CNOT1-222ENST00000570139 KRT76Q01546 638 aa8.45□□□□□ -1.06
CNOT1-222ENST00000570139 NUCB1Q02818 461 aa8.45□□□□□ -1.06
CNOT1-222ENST00000570139 GCKRQ14397 625 aa8.45□□□□□ -1.06
CNOT1-222ENST00000570139 APBB1IPQ7Z5R6 666 aaPredicted RBP8.45□□□□□ -1.06
CNOT1-222ENST00000570139 AGGF1Q8N302 714 aaeCLIP8.45□□□□□ -1.06
CNOT1-222ENST00000570139 TOP6BLQ8N6T0 577 aa8.45□□□□□ -1.06
CNOT1-222ENST00000570139 C2orf69Q8N8R5 385 aa8.45□□□□□ -1.06
CNOT1-222ENST00000570139 DAGLBQ8NCG7 672 aa8.45□□□□□ -1.06
CNOT1-222ENST00000570139 CLRN3Q8NCR9 226 aa8.45□□□□□ -1.06
CNOT1-222ENST00000570139 C1orf162Q8NEQ5 155 aaPredicted RBP8.45□□□□□ -1.06
CNOT1-222ENST00000570139 FAXDC2Q96IV6 333 aa8.45□□□□□ -1.06
CNOT1-222ENST00000570139 MYD88Q99836 296 aa8.45□□□□□ -1.06
CNOT1-222ENST00000570139 DCTPP1Q9H773 170 aa8.45□□□□□ -1.06
CNOT1-222ENST00000570139 BSDC1Q9NW68 430 aaPredicted RBP8.45□□□□□ -1.06
CNOT1-222ENST00000570139 GPATCH2Q9NW75 528 aa8.45□□□□□ -1.06
CNOT1-222ENST00000570139 CWC25Q9NXE8 425 aaPredicted RBP8.45□□□□□ -1.06
CNOT1-222ENST00000570139 USP25Q9UHP3 1055 aa8.45□□□□□ -1.06
CNOT1-222ENST00000570139 C4BP0C0L5 1744 aa8.45□□□□□ -1.06
CNOT1-222ENST00000570139 FZD9O00144 591 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms