RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 LRRC37A2A6NM11 1700 aa15.19■□□□□ 0.02
TPM1-215ENST00000558868 ZNFX1Q9P2E3 1918 aaKnown RBP15.18■□□□□ 0.02
TPM1-215ENST00000558868 IGKV6D-21A0A0A0MT36 114 aa15.18■□□□□ 0.02
TPM1-215ENST00000558868 SLC15A5A6NIM6 579 aa15.18■□□□□ 0.02
TPM1-215ENST00000558868 SLC16A3O15427 465 aaKnown RBP15.18■□□□□ 0.02
TPM1-215ENST00000558868 ZNF862O60290 1169 aa15.18■□□□□ 0.02
TPM1-215ENST00000558868 GGPS1O95749 300 aa15.18■□□□□ 0.02
TPM1-215ENST00000558868 SCP2P22307 547 aa15.18■□□□□ 0.02
TPM1-215ENST00000558868 KCNJ6P48051 423 aa15.18■□□□□ 0.02
TPM1-215ENST00000558868 CASP5P51878 434 aa15.18■□□□□ 0.02
TPM1-215ENST00000558868 SMTNP53814 917 aa15.18■□□□□ 0.02
TPM1-215ENST00000558868 SNRPFP62306 86 aaKnown RBP15.18■□□□□ 0.02
TPM1-215ENST00000558868 TBC1D8BQ0IIM8 1120 aa15.18■□□□□ 0.02
TPM1-215ENST00000558868 ADAM9Q13443 819 aa15.18■□□□□ 0.02
TPM1-215ENST00000558868 VWA3BQ502W6 1294 aa15.18■□□□□ 0.02
TPM1-215ENST00000558868 CELF3Q5SZQ8 465 aaKnown RBP15.18■□□□□ 0.02
TPM1-215ENST00000558868 UTP14CQ5TAP6 766 aaKnown RBP15.18■□□□□ 0.02
TPM1-215ENST00000558868 ANO5Q75V66 913 aa15.18■□□□□ 0.02
TPM1-215ENST00000558868 SAPCD2Q86UD0 394 aa15.18■□□□□ 0.02
TPM1-215ENST00000558868 CNGA4Q8IV77 575 aa15.18■□□□□ 0.02
TPM1-215ENST00000558868 CCDC60Q8IWA6 550 aaPredicted RBP15.18■□□□□ 0.02
TPM1-215ENST00000558868 DAW1Q8N136 415 aa15.18■□□□□ 0.02
TPM1-215ENST00000558868 RETREG2Q8NC44 543 aa15.18■□□□□ 0.02
TPM1-215ENST00000558868 AFAP1L1Q8TED9 768 aa15.18■□□□□ 0.02
TPM1-215ENST00000558868 HVCN1Q96D96 273 aa15.18■□□□□ 0.02
TPM1-215ENST00000558868 FAM167AQ96KS9 214 aa15.18■□□□□ 0.02
TPM1-215ENST00000558868 PANX2Q96RD6 677 aa15.18■□□□□ 0.02
TPM1-215ENST00000558868 R3HDMLQ9H3Y0 253 aa15.18■□□□□ 0.02
TPM1-215ENST00000558868 ST6GALNAC4Q9H4F1 302 aa15.18■□□□□ 0.02
TPM1-215ENST00000558868 TMEM206Q9H813 350 aa15.18■□□□□ 0.02
TPM1-215ENST00000558868 SEPT9Q9UHD8 586 aaPredicted RBP15.18■□□□□ 0.02
TPM1-215ENST00000558868 FAM184BQ9ULE4 1060 aa15.18■□□□□ 0.02
TPM1-215ENST00000558868 PASKQ96RG2 1323 aa15.17■□□□□ 0.02
TPM1-215ENST00000558868 H0YCG3 227 aa15.17■□□□□ 0.02
TPM1-215ENST00000558868 K7ENM7 598 aa15.17■□□□□ 0.02
TPM1-215ENST00000558868 NOP56O00567 594 aaKnown RBP15.17■□□□□ 0.02
TPM1-215ENST00000558868 STBD1O95210 358 aa15.17■□□□□ 0.02
TPM1-215ENST00000558868 OATP04181 439 aa15.17■□□□□ 0.02
TPM1-215ENST00000558868 SLC10A3P09131 477 aa15.17■□□□□ 0.02
TPM1-215ENST00000558868 NR2F2P24468 414 aa15.17■□□□□ 0.02
TPM1-215ENST00000558868 NMT1P30419 496 aaKnown RBP15.17■□□□□ 0.02
TPM1-215ENST00000558868 NPEPPSP55786 919 aa15.17■□□□□ 0.02
TPM1-215ENST00000558868 RTP1P59025 263 aa15.17■□□□□ 0.02
TPM1-215ENST00000558868 CCZ1BP86790 482 aa15.17■□□□□ 0.02
TPM1-215ENST00000558868 CCZ1P86791 482 aaPredicted RBP15.17■□□□□ 0.02
TPM1-215ENST00000558868 SREBF2Q12772 1141 aa15.17■□□□□ 0.02
TPM1-215ENST00000558868 MYBPC2Q14324 1141 aa15.17■□□□□ 0.02
TPM1-215ENST00000558868 GRB14Q14449 540 aa15.17■□□□□ 0.02
TPM1-215ENST00000558868 ARID5BQ14865 1188 aa15.17■□□□□ 0.02
TPM1-215ENST00000558868 FAM102BQ5T8I3 360 aa15.17■□□□□ 0.02
TPM1-215ENST00000558868 PLA2G4FQ68DD2 849 aa15.17■□□□□ 0.02
TPM1-215ENST00000558868 ARMCX2Q7L311 632 aa15.17■□□□□ 0.02
TPM1-215ENST00000558868 EEPD1Q7L9B9 569 aa15.17■□□□□ 0.02
TPM1-215ENST00000558868 GPR142Q7Z601 462 aa15.17■□□□□ 0.02
TPM1-215ENST00000558868 FRMD5Q7Z6J6 570 aa15.17■□□□□ 0.02
TPM1-215ENST00000558868 DPP9Q86TI2 863 aa15.17■□□□□ 0.02
TPM1-215ENST00000558868 DHX37Q8IY37 1157 aaKnown RBP15.17■□□□□ 0.02
TPM1-215ENST00000558868 EXOC8Q8IYI6 725 aa15.17■□□□□ 0.02
TPM1-215ENST00000558868 MSL3Q8N5Y2 521 aaKnown RBP15.17■□□□□ 0.02
TPM1-215ENST00000558868 ACCSQ96QU6 501 aa15.17■□□□□ 0.02
TPM1-215ENST00000558868 FIZ1Q96SL8 496 aa15.17■□□□□ 0.02
TPM1-215ENST00000558868 NAA15Q9BXJ9 866 aaKnown RBP15.17■□□□□ 0.02
TPM1-215ENST00000558868 NIFKQ9BYG3 293 aaKnown RBP15.17■□□□□ 0.02
TPM1-215ENST00000558868 AZI2Q9H6S1 392 aa15.17■□□□□ 0.02
TPM1-215ENST00000558868 ATP6V0A4Q9HBG4 840 aa15.17■□□□□ 0.02
TPM1-215ENST00000558868 METTL14Q9HCE5 456 aaKnown RBP15.17■□□□□ 0.02
TPM1-215ENST00000558868 CYP26B1Q9NR63 512 aa15.17■□□□□ 0.02
TPM1-215ENST00000558868 PYCARDQ9ULZ3 195 aa15.17■□□□□ 0.02
TPM1-215ENST00000558868 PLXNB2O15031 1838 aa15.17■□□□□ 0.02
TPM1-215ENST00000558868 GSTTP1A0A1W2PQM5 241 aa15.16■□□□□ 0.02
TPM1-215ENST00000558868 CCP110O43303 1012 aa15.16■□□□□ 0.02
TPM1-215ENST00000558868 NR3C1P04150 777 aa15.16■□□□□ 0.02
TPM1-215ENST00000558868 TXNP10599 105 aaKnown RBP15.16■□□□□ 0.02
TPM1-215ENST00000558868 HOXD13P35453 343 aa15.16■□□□□ 0.02
TPM1-215ENST00000558868 RFC5P40937 340 aa15.16■□□□□ 0.02
TPM1-215ENST00000558868 STAT5BP51692 787 aa15.16■□□□□ 0.02
TPM1-215ENST00000558868 DMP1Q13316 513 aaPredicted RBP15.16■□□□□ 0.02
TPM1-215ENST00000558868 NOLC1Q14978 699 aaKnown RBP eCLIP15.16■□□□□ 0.02
TPM1-215ENST00000558868 TAF1CQ15572 869 aaPredicted RBP15.16■□□□□ 0.02
TPM1-215ENST00000558868 LY6KQ17RY6 165 aa15.16■□□□□ 0.02
TPM1-215ENST00000558868 CCDC62Q6P9F0 684 aa15.16■□□□□ 0.02
TPM1-215ENST00000558868 MAMDC4Q6UXC1 1216 aa15.16■□□□□ 0.02
TPM1-215ENST00000558868 SYCP3Q8IZU3 236 aa15.16■□□□□ 0.02
TPM1-215ENST00000558868 SMC1BQ8NDV3 1235 aa15.16■□□□□ 0.02
TPM1-215ENST00000558868 SPIRE2Q8WWL2 714 aa15.16■□□□□ 0.02
TPM1-215ENST00000558868 IFT74Q96LB3 600 aa15.16■□□□□ 0.02
TPM1-215ENST00000558868 ERGIC2Q96RQ1 377 aa15.16■□□□□ 0.02
TPM1-215ENST00000558868 STRA6Q9BX79 667 aa15.16■□□□□ 0.02
TPM1-215ENST00000558868 GBP3Q9H0R5 595 aa15.16■□□□□ 0.02
TPM1-215ENST00000558868 NDST4Q9H3R1 872 aa15.16■□□□□ 0.02
TPM1-215ENST00000558868 BCAS3Q9H6U6 928 aa15.16■□□□□ 0.02
TPM1-215ENST00000558868 SPTLC3Q9NUV7 552 aa15.16■□□□□ 0.02
TPM1-215ENST00000558868 EXOC7Q9UPT5 735 aa15.16■□□□□ 0.02
TPM1-215ENST00000558868 TLL2Q9Y6L7 1015 aa15.16■□□□□ 0.02
TPM1-215ENST00000558868 MYH11P35749 1972 aa15.15■□□□□ 0.02
TPM1-215ENST00000558868 RBM47A0AV96 593 aaKnown RBP15.15■□□□□ 0.02
TPM1-215ENST00000558868 STX10O60499 249 aa15.15■□□□□ 0.02
TPM1-215ENST00000558868 SORBS3O60504 671 aa15.15■□□□□ 0.02
TPM1-215ENST00000558868 LGR5O75473 907 aa15.15■□□□□ 0.02
TPM1-215ENST00000558868 PPP1R37O75864 691 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms