RNA–Protein interactions for RNA: ENST00000545894.1

DDB1-224, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,282 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-224ENST00000545894 ITGB3BPQ13352 177 aaPredicted RBP12.54□□□□□ -0.4
DDB1-224ENST00000545894 TRADDQ15628 312 aa12.54□□□□□ -0.4
DDB1-224ENST00000545894 SHROOM1Q2M3G4 852 aaPredicted RBP12.54□□□□□ -0.4
DDB1-224ENST00000545894 CEP85LQ5SZL2 805 aa12.54□□□□□ -0.4
DDB1-224ENST00000545894 C10orf76Q5T2E6 689 aa12.54□□□□□ -0.4
DDB1-224ENST00000545894 PPP4R3AQ6IN85 833 aa12.54□□□□□ -0.4
DDB1-224ENST00000545894 CCDC65Q8IXS2 484 aa12.54□□□□□ -0.4
DDB1-224ENST00000545894 ZNF341Q9BYN7 854 aa12.54□□□□□ -0.4
DDB1-224ENST00000545894 GANQ9H2C0 597 aa12.54□□□□□ -0.4
DDB1-224ENST00000545894 PLCB1Q9NQ66 1216 aa12.54□□□□□ -0.4
DDB1-224ENST00000545894 ZNF112Q9UJU3 913 aa12.54□□□□□ -0.4
DDB1-224ENST00000545894 FRMPD2Q68DX3 1309 aaPredicted RBP12.53□□□□□ -0.4
DDB1-224ENST00000545894 KCNK3O14649 394 aa12.53□□□□□ -0.4
DDB1-224ENST00000545894 SSBP05455 408 aaKnown RBP eCLIP12.53□□□□□ -0.4
DDB1-224ENST00000545894 PDHBP11177 359 aa12.53□□□□□ -0.4
DDB1-224ENST00000545894 FNTAP49354 379 aa12.53□□□□□ -0.4
DDB1-224ENST00000545894 IRX3P78415 501 aaPredicted RBP12.53□□□□□ -0.4
DDB1-224ENST00000545894 CUL1Q13616 776 aa12.53□□□□□ -0.4
DDB1-224ENST00000545894 HLTFQ14527 1009 aaKnown RBP eCLIP12.53□□□□□ -0.4
DDB1-224ENST00000545894 ENOX2Q16206 610 aaKnown RBP12.53□□□□□ -0.4
DDB1-224ENST00000545894 KCNV1Q6PIU1 500 aa12.53□□□□□ -0.4
DDB1-224ENST00000545894 NLRP14Q86W24 1093 aa12.53□□□□□ -0.4
DDB1-224ENST00000545894 NELFCDQ8IXH7 590 aa12.53□□□□□ -0.4
DDB1-224ENST00000545894 ARFGAP2Q8N6H7 521 aa12.53□□□□□ -0.4
DDB1-224ENST00000545894 PBKQ96KB5 322 aa12.53□□□□□ -0.4
DDB1-224ENST00000545894 TMBIM4Q9HC24 238 aa12.53□□□□□ -0.4
DDB1-224ENST00000545894 POLD4Q9HCU8 107 aa12.53□□□□□ -0.4
DDB1-224ENST00000545894 TBC1D7Q9P0N9 293 aa12.53□□□□□ -0.4
DDB1-224ENST00000545894 DDX25Q9UHL0 483 aaKnown RBP12.53□□□□□ -0.4
DDB1-224ENST00000545894 KDM3AQ9Y4C1 1321 aa12.53□□□□□ -0.4
DDB1-224ENST00000545894 H0YHG0 523 aa12.53□□□□□ -0.4
DDB1-224ENST00000545894 MARCH6O60337 910 aa12.53□□□□□ -0.4
DDB1-224ENST00000545894 KIF4AO95239 1232 aa12.53□□□□□ -0.4
DDB1-224ENST00000545894 ERVK-9P63128 1117 aa12.53□□□□□ -0.4
DDB1-224ENST00000545894 FSTL1Q12841 308 aa12.53□□□□□ -0.4
DDB1-224ENST00000545894 IFI16Q16666 785 aaKnown RBP12.53□□□□□ -0.4
DDB1-224ENST00000545894 CERKLQ49MI3 558 aaPredicted RBP12.53□□□□□ -0.4
DDB1-224ENST00000545894 ASPRV1Q53RT3 343 aa12.53□□□□□ -0.4
DDB1-224ENST00000545894 MYCBPAPQ8TBZ2 947 aa12.53□□□□□ -0.4
DDB1-224ENST00000545894 KLRG1Q96E93 195 aa12.53□□□□□ -0.4
DDB1-224ENST00000545894 CCT8L2Q96SF2 557 aa12.53□□□□□ -0.4
DDB1-224ENST00000545894 FGFBP2Q9BYJ0 223 aa12.53□□□□□ -0.4
DDB1-224ENST00000545894 NT5C3AQ9H0P0 336 aa12.53□□□□□ -0.4
DDB1-224ENST00000545894 GGA2Q9UJY4 613 aa12.53□□□□□ -0.4
DDB1-224ENST00000545894 PCDHA2Q9Y5H9 948 aa12.53□□□□□ -0.4
DDB1-224ENST00000545894 PPP1R12BO60237 982 aaPredicted RBP12.52□□□□□ -0.41
DDB1-224ENST00000545894 GDF11O95390 407 aa12.52□□□□□ -0.41
DDB1-224ENST00000545894 FAM107AO95990 144 aa12.52□□□□□ -0.41
DDB1-224ENST00000545894 USP11P51784 963 aa12.52□□□□□ -0.41
DDB1-224ENST00000545894 MNAT1P51948 309 aa12.52□□□□□ -0.41
DDB1-224ENST00000545894 TTLL12Q14166 644 aaPredicted RBP12.52□□□□□ -0.41
DDB1-224ENST00000545894 HYIQ5T013 277 aa12.52□□□□□ -0.41
DDB1-224ENST00000545894 PPP1R18Q6NYC8 613 aa12.52□□□□□ -0.41
DDB1-224ENST00000545894 ZC3H3Q8IXZ2 948 aaKnown RBP12.52□□□□□ -0.41
DDB1-224ENST00000545894 ACTRT1Q8TDG2 376 aa12.52□□□□□ -0.41
DDB1-224ENST00000545894 SCFD2Q8WU76 684 aa12.52□□□□□ -0.41
DDB1-224ENST00000545894 HAS1Q92839 578 aa12.52□□□□□ -0.41
DDB1-224ENST00000545894 LRRC45Q96CN5 670 aa12.52□□□□□ -0.41
DDB1-224ENST00000545894 WRNIP1Q96S55 665 aa12.52□□□□□ -0.41
DDB1-224ENST00000545894 KCTD10Q9H3F6 313 aa12.52□□□□□ -0.41
DDB1-224ENST00000545894 KANSL2Q9H9L4 492 aa12.52□□□□□ -0.41
DDB1-224ENST00000545894 GCOM1H8Y6P7 765 aaPredicted RBP12.51□□□□□ -0.41
DDB1-224ENST00000545894 MYZAPP0CAP1 466 aa12.51□□□□□ -0.41
DDB1-224ENST00000545894 AKR1B1P15121 316 aa12.51□□□□□ -0.41
DDB1-224ENST00000545894 ECHS1P30084 290 aa12.51□□□□□ -0.41
DDB1-224ENST00000545894 HSD17B3P37058 310 aa12.51□□□□□ -0.41
DDB1-224ENST00000545894 SEC24CP53992 1094 aa12.51□□□□□ -0.41
DDB1-224ENST00000545894 ADAM9Q13443 819 aa12.51□□□□□ -0.41
DDB1-224ENST00000545894 HERC4Q5GLZ8 1057 aaPredicted RBP12.51□□□□□ -0.41
DDB1-224ENST00000545894 PPP4R3CPQ6ZMV5 832 aa12.51□□□□□ -0.41
DDB1-224ENST00000545894 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.51□□□□□ -0.413e-20■□□□□ 10.9
DDB1-224ENST00000545894 ZKSCAN4Q969J2 545 aaPredicted RBP12.51□□□□□ -0.41
DDB1-224ENST00000545894 CABS1Q96KC9 395 aa12.51□□□□□ -0.41
DDB1-224ENST00000545894 CALR3Q96L12 384 aaKnown RBP12.51□□□□□ -0.41
DDB1-224ENST00000545894 GBA2Q9HCG7 927 aaPredicted RBP12.51□□□□□ -0.41
DDB1-224ENST00000545894 EMILIN3Q9NT22 766 aa12.51□□□□□ -0.41
DDB1-224ENST00000545894 PCDHA12Q9UN75 941 aa12.51□□□□□ -0.41
DDB1-224ENST00000545894 BZW2Q9Y6E2 419 aaKnown RBP12.51□□□□□ -0.41
DDB1-224ENST00000545894 CETN3O15182 167 aa12.51□□□□□ -0.41
DDB1-224ENST00000545894 CEP104O60308 925 aa12.51□□□□□ -0.41
DDB1-224ENST00000545894 CAP2P40123 477 aa12.51□□□□□ -0.41
DDB1-224ENST00000545894 PTK2Q05397 1052 aa12.51□□□□□ -0.41
DDB1-224ENST00000545894 PDE4CQ08493 712 aa12.51□□□□□ -0.41
DDB1-224ENST00000545894 KCNH2Q12809 1159 aa12.51□□□□□ -0.41
DDB1-224ENST00000545894 UBE2SQ16763 222 aa12.51□□□□□ -0.41
DDB1-224ENST00000545894 EDRF1Q3B7T1 1238 aa12.51□□□□□ -0.41
DDB1-224ENST00000545894 SCFD1Q8WVM8 642 aa12.51□□□□□ -0.41
DDB1-224ENST00000545894 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.51□□□□□ -0.41
DDB1-224ENST00000545894 E7EVH7 732 aa12.5□□□□□ -0.41
DDB1-224ENST00000545894 E9PMD0 336 aa12.5□□□□□ -0.41
DDB1-224ENST00000545894 H0YGN5 161 aa12.5□□□□□ -0.41
DDB1-224ENST00000545894 MYO1FO00160 1098 aa12.5□□□□□ -0.41
DDB1-224ENST00000545894 MPHOSPH10O00566 681 aaKnown RBP12.5□□□□□ -0.41
DDB1-224ENST00000545894 CTNND1O60716 968 aaKnown RBP12.5□□□□□ -0.41
DDB1-224ENST00000545894 PLA2G4BP0C869 781 aa12.5□□□□□ -0.41
DDB1-224ENST00000545894 GCFC2P16383 781 aaKnown RBP12.5□□□□□ -0.41
DDB1-224ENST00000545894 HPDP32754 393 aaPredicted RBP12.5□□□□□ -0.41
DDB1-224ENST00000545894 IREB2P48200 963 aaKnown RBP12.5□□□□□ -0.41
DDB1-224ENST00000545894 CLK2P49760 499 aaKnown RBP12.5□□□□□ -0.41
DDB1-224ENST00000545894 SETQ01105 290 aaPredicted RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms