RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 MRPS27Q92552 414 aaKnown RBP23.97■■□□□ 1.43
CHKA-206ENST00000531341 SNX27Q96L92 541 aa23.97■■□□□ 1.43
CHKA-206ENST00000531341 CASD1Q96PB1 797 aa23.97■■□□□ 1.43
CHKA-206ENST00000531341 TCF25Q9BQ70 676 aa23.97■■□□□ 1.43
CHKA-206ENST00000531341 ZDBF2Q9HCK1 2354 aa23.97■■□□□ 1.43
CHKA-206ENST00000531341 ZNF302Q9NR11 478 aa23.97■■□□□ 1.43
CHKA-206ENST00000531341 TMEM161AQ9NX61 479 aa23.97■■□□□ 1.43
CHKA-206ENST00000531341 ZFHX2Q9C0A1 2572 aaPredicted RBP23.96■■□□□ 1.43
CHKA-206ENST00000531341 ADAMTS3O15072 1205 aa23.96■■□□□ 1.43
CHKA-206ENST00000531341 ST18O60284 1047 aa23.96■■□□□ 1.43
CHKA-206ENST00000531341 C22orf31O95567 290 aa23.96■■□□□ 1.43
CHKA-206ENST00000531341 SREBF1P36956 1147 aa23.96■■□□□ 1.43
CHKA-206ENST00000531341 CLK2P49760 499 aaKnown RBP23.96■■□□□ 1.43
CHKA-206ENST00000531341 CRYBB1P53674 252 aaPredicted RBP23.96■■□□□ 1.43
CHKA-206ENST00000531341 PLCB3Q01970 1234 aa23.96■■□□□ 1.43
CHKA-206ENST00000531341 NECTIN1Q15223 517 aa23.96■■□□□ 1.43
CHKA-206ENST00000531341 ZNF484Q5JVG2 852 aa23.96■■□□□ 1.43
CHKA-206ENST00000531341 FAM160B1Q5W0V3 765 aa23.96■■□□□ 1.43
CHKA-206ENST00000531341 PDXDC2PQ6P474 469 aa23.96■■□□□ 1.43
CHKA-206ENST00000531341 SGMS1Q86VZ5 419 aa23.96■■□□□ 1.43
CHKA-206ENST00000531341 YTHDC1Q96MU7 727 aaKnown RBP23.96■■□□□ 1.43
CHKA-206ENST00000531341 V9GY48 417 aaPredicted RBP23.96■■□□□ 1.43
CHKA-206ENST00000531341 COL1A2P08123 1366 aa23.95■■□□□ 1.42
CHKA-206ENST00000531341 SMCO2A6NFE2 343 aa23.95■■□□□ 1.42
CHKA-206ENST00000531341 FOSP01100 380 aaPredicted RBP23.95■■□□□ 1.42
CHKA-206ENST00000531341 ADCY7P51828 1080 aa23.95■■□□□ 1.42
CHKA-206ENST00000531341 PDE12Q6L8Q7 609 aaKnown RBP23.95■■□□□ 1.42
CHKA-206ENST00000531341 RASGRP4Q8TDF6 673 aa23.95■■□□□ 1.42
CHKA-206ENST00000531341 ELAC1Q9H777 363 aaKnown RBP23.95■■□□□ 1.42
CHKA-206ENST00000531341 BRPF3Q9ULD4 1205 aa23.95■■□□□ 1.42
CHKA-206ENST00000531341 LZTS1Q9Y250 596 aa23.95■■□□□ 1.42
CHKA-206ENST00000531341 LAG3P18627 525 aa23.94■■□□□ 1.42
CHKA-206ENST00000531341 ZNF76P36508 570 aa23.94■■□□□ 1.42
CHKA-206ENST00000531341 ENTPD7Q9NQZ7 604 aa23.94■■□□□ 1.42
CHKA-206ENST00000531341 IGLV3-22A0A075B6J6 115 aa23.93■■□□□ 1.42
CHKA-206ENST00000531341 H0Y858 1186 aa23.93■■□□□ 1.42
CHKA-206ENST00000531341 GFRA3O60609 400 aa23.93■■□□□ 1.42
CHKA-206ENST00000531341 ODR4Q5SWX8 454 aa23.93■■□□□ 1.42
CHKA-206ENST00000531341 APOA5Q6Q788 366 aa23.93■■□□□ 1.42
CHKA-206ENST00000531341 KCNT2Q6UVM3 1135 aa23.93■■□□□ 1.42
CHKA-206ENST00000531341 PLA2G4DQ86XP0 818 aa23.93■■□□□ 1.42
CHKA-206ENST00000531341 METTL13Q8N6R0 699 aa23.93■■□□□ 1.42
CHKA-206ENST00000531341 ATOH1Q92858 354 aaPredicted RBP23.93■■□□□ 1.42
CHKA-206ENST00000531341 ZNF668Q96K58 619 aaPredicted RBP23.93■■□□□ 1.42
CHKA-206ENST00000531341 TCEANC2Q96MN5 208 aa23.93■■□□□ 1.42
CHKA-206ENST00000531341 SMOC2Q9H3U7 446 aa23.93■■□□□ 1.42
CHKA-206ENST00000531341 MAFBQ9Y5Q3 323 aaPredicted RBP23.93■■□□□ 1.42
CHKA-206ENST00000531341 CLCN3P51790 818 aa23.92■■□□□ 1.42
CHKA-206ENST00000531341 JAKMIP3Q5VZ66 844 aa23.92■■□□□ 1.42
CHKA-206ENST00000531341 PPP1R18Q6NYC8 613 aa23.92■■□□□ 1.42
CHKA-206ENST00000531341 MIS18BP1Q6P0N0 1132 aa23.92■■□□□ 1.42
CHKA-206ENST00000531341 NIPA1Q7RTP0 329 aa23.92■■□□□ 1.42
CHKA-206ENST00000531341 CKAP2LQ8IYA6 745 aa23.92■■□□□ 1.42
CHKA-206ENST00000531341 KREMEN2Q8NCW0 462 aa23.92■■□□□ 1.42
CHKA-206ENST00000531341 CRYGNQ8WXF5 182 aa23.92■■□□□ 1.42
CHKA-206ENST00000531341 RIPOR3Q96MK2 946 aa23.92■■□□□ 1.42
CHKA-206ENST00000531341 TMEM117Q9H0C3 514 aa23.92■■□□□ 1.42
CHKA-206ENST00000531341 TSHZ2Q9NRE2 1034 aa23.92■■□□□ 1.42
CHKA-206ENST00000531341 RNF216Q9NWF9 866 aaPredicted RBP23.92■■□□□ 1.42
CHKA-206ENST00000531341 BARHL2Q9NY43 387 aa23.92■■□□□ 1.42
CHKA-206ENST00000531341 PUF60Q9UHX1 559 aaKnown RBP23.92■■□□□ 1.42
CHKA-206ENST00000531341 EVPLQ92817 2033 aa23.91■■□□□ 1.42
CHKA-206ENST00000531341 FSD2A1L4K1 749 aa23.91■■□□□ 1.42
CHKA-206ENST00000531341 IPO5O00410 1097 aaKnown RBP23.91■■□□□ 1.42
CHKA-206ENST00000531341 FAM43BQ6ZT52 329 aaPredicted RBP23.91■■□□□ 1.42
CHKA-206ENST00000531341 TMC7Q7Z402 723 aa23.91■■□□□ 1.42
CHKA-206ENST00000531341 ESYT1Q9BSJ8 1104 aa23.91■■□□□ 1.42
CHKA-206ENST00000531341 ADAMTS10Q9H324 1103 aa23.91■■□□□ 1.42
CHKA-206ENST00000531341 NGRNQ9NPE2 291 aaKnown RBP23.91■■□□□ 1.42
CHKA-206ENST00000531341 FAM217BQ9NTX9 383 aaPredicted RBP23.91■■□□□ 1.42
CHKA-206ENST00000531341 RBM28Q9NW13 759 aaKnown RBP23.91■■□□□ 1.42
CHKA-206ENST00000531341 NLRP11P59045 1033 aaKnown RBP23.9■■□□□ 1.42
CHKA-206ENST00000531341 AP3B2Q13367 1082 aa23.9■■□□□ 1.42
CHKA-206ENST00000531341 RTN1Q16799 776 aa23.9■■□□□ 1.42
CHKA-206ENST00000531341 CLLU1OSQ5K130 101 aa23.9■■□□□ 1.42
CHKA-206ENST00000531341 ZBTB33Q86T24 672 aa23.9■■□□□ 1.42
CHKA-206ENST00000531341 BBXQ8WY36 941 aaPredicted RBP23.9■■□□□ 1.42
CHKA-206ENST00000531341 ZNF558Q96NG5 402 aa23.9■■□□□ 1.42
CHKA-206ENST00000531341 POMKQ9H5K3 350 aa23.9■■□□□ 1.42
CHKA-206ENST00000531341 HCFC2Q9Y5Z7 792 aa23.9■■□□□ 1.42
CHKA-206ENST00000531341 C2CD4DB7Z1M9 353 aa23.89■■□□□ 1.41
CHKA-206ENST00000531341 BRD1O95696 1058 aa23.89■■□□□ 1.41
CHKA-206ENST00000531341 WEE2P0C1S8 567 aa23.89■■□□□ 1.41
CHKA-206ENST00000531341 SRGAP2BP0DMP2 458 aa23.89■■□□□ 1.41
CHKA-206ENST00000531341 HOXB8P17481 243 aaPredicted RBP23.89■■□□□ 1.41
CHKA-206ENST00000531341 CDC27P30260 824 aa23.89■■□□□ 1.41
CHKA-206ENST00000531341 KANK3Q6NY19 840 aa23.89■■□□□ 1.41
CHKA-206ENST00000531341 SYNE3Q6ZMZ3 975 aa23.89■■□□□ 1.41
CHKA-206ENST00000531341 ECHDC2Q86YB7 292 aa23.89■■□□□ 1.41
CHKA-206ENST00000531341 LRRC71Q8N4P6 559 aa23.89■■□□□ 1.41
CHKA-206ENST00000531341 LINC01465Q8N7H1 131 aa23.89■■□□□ 1.41
CHKA-206ENST00000531341 FEZF2Q8TBJ5 459 aa23.89■■□□□ 1.41
CHKA-206ENST00000531341 ZNF577Q9BSK1 485 aa23.89■■□□□ 1.41
CHKA-206ENST00000531341 CYP3A4P08684 503 aa23.88■■□□□ 1.41
CHKA-206ENST00000531341 FGFR4P22455 802 aa23.88■■□□□ 1.41
CHKA-206ENST00000531341 EXOSC10Q01780 885 aaKnown RBP23.88■■□□□ 1.41
CHKA-206ENST00000531341 EFCAB12Q6NXP0 572 aa23.88■■□□□ 1.41
CHKA-206ENST00000531341 MRPL43Q8N983 215 aaKnown RBP23.88■■□□□ 1.41
CHKA-206ENST00000531341 SPG21Q9NZD8 308 aa23.88■■□□□ 1.41
CHKA-206ENST00000531341 GABBR1Q9UBS5 961 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms