RNA–Protein interactions for RNA: ENST00000530310.1

NR1H3-232, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 4

Gene NR1H3, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-232ENST00000530310 NFX1Q12986 1120 aaKnown RBP16.63■□□□□ 0.25
NR1H3-232ENST00000530310 TMEM266Q2M3C6 531 aa16.63■□□□□ 0.25
NR1H3-232ENST00000530310 NIPA1Q7RTP0 329 aa16.63■□□□□ 0.25
NR1H3-232ENST00000530310 CMTR2Q8IYT2 770 aaKnown RBP16.63■□□□□ 0.25
NR1H3-232ENST00000530310 NME8Q8N427 588 aa16.63■□□□□ 0.25
NR1H3-232ENST00000530310 ZNF396Q96N95 335 aaPredicted RBP16.63■□□□□ 0.25
NR1H3-232ENST00000530310 PLVAPQ9BX97 442 aa16.63■□□□□ 0.25
NR1H3-232ENST00000530310 IGFLR1Q9H665 355 aa16.63■□□□□ 0.25
NR1H3-232ENST00000530310 ALG13Q9NP73 1137 aaKnown RBP16.63■□□□□ 0.25
NR1H3-232ENST00000530310 ZNF302Q9NR11 478 aa16.63■□□□□ 0.25
NR1H3-232ENST00000530310 LRFN2Q9ULH4 789 aa16.63■□□□□ 0.25
NR1H3-232ENST00000530310 FAM86B1E9PN63 330 aa16.62■□□□□ 0.25
NR1H3-232ENST00000530310 NCK2O43639 380 aa16.62■□□□□ 0.25
NR1H3-232ENST00000530310 GPR37L1O60883 481 aa16.62■□□□□ 0.25
NR1H3-232ENST00000530310 MMP1P03956 469 aa16.62■□□□□ 0.25
NR1H3-232ENST00000530310 FAM86B2P0C5J1 330 aa16.62■□□□□ 0.25
NR1H3-232ENST00000530310 SCG2P13521 617 aa16.62■□□□□ 0.25
NR1H3-232ENST00000530310 XBP1P17861 261 aa16.62■□□□□ 0.25
NR1H3-232ENST00000530310 UBE2HP62256 183 aa16.62■□□□□ 0.25
NR1H3-232ENST00000530310 HYAL1Q12794 435 aa16.62■□□□□ 0.25
NR1H3-232ENST00000530310 GSE1Q14687 1217 aa16.62■□□□□ 0.25
NR1H3-232ENST00000530310 COL19A1Q14993 1142 aa16.62■□□□□ 0.25
NR1H3-232ENST00000530310 CLUL1Q15846 466 aa16.62■□□□□ 0.25
NR1H3-232ENST00000530310 PFKFB3Q16875 520 aaPredicted RBP16.62■□□□□ 0.25
NR1H3-232ENST00000530310 MIS18BP1Q6P0N0 1132 aa16.62■□□□□ 0.25
NR1H3-232ENST00000530310 PDXDC2PQ6P474 469 aa16.62■□□□□ 0.25
NR1H3-232ENST00000530310 ABHD15Q6UXT9 468 aa16.62■□□□□ 0.25
NR1H3-232ENST00000530310 CCDC60Q8IWA6 550 aaPredicted RBP16.62■□□□□ 0.25
NR1H3-232ENST00000530310 ATP8B4Q8TF62 1192 aa16.62■□□□□ 0.25
NR1H3-232ENST00000530310 SYAP1Q96A49 352 aaPredicted RBP16.62■□□□□ 0.25
NR1H3-232ENST00000530310 C11orf16Q9NQ32 467 aa16.62■□□□□ 0.25
NR1H3-232ENST00000530310 IGKV6D-21A0A0A0MT36 114 aa16.61■□□□□ 0.25
NR1H3-232ENST00000530310 PRPF3O43395 683 aaKnown RBP16.61■□□□□ 0.25
NR1H3-232ENST00000530310 PRPF40AO75400 957 aaKnown RBP16.61■□□□□ 0.25
NR1H3-232ENST00000530310 GATMP50440 423 aa16.61■□□□□ 0.25
NR1H3-232ENST00000530310 TRIM29Q14134 588 aa16.61■□□□□ 0.25
NR1H3-232ENST00000530310 SWSAP1Q6NVH7 229 aa16.61■□□□□ 0.25
NR1H3-232ENST00000530310 CKAP2LQ8IYA6 745 aa16.61■□□□□ 0.25
NR1H3-232ENST00000530310 PPP1R16BQ96T49 567 aa16.61■□□□□ 0.25
NR1H3-232ENST00000530310 ZNF577Q9BSK1 485 aa16.61■□□□□ 0.25
NR1H3-232ENST00000530310 TMX1Q9H3N1 280 aa16.61■□□□□ 0.25
NR1H3-232ENST00000530310 C6orf50Q9HD87 102 aa16.61■□□□□ 0.25
NR1H3-232ENST00000530310 TCEAL9Q9UHQ7 104 aa16.61■□□□□ 0.25
NR1H3-232ENST00000530310 PLAGL2Q9UPG8 496 aa16.61■□□□□ 0.25
NR1H3-232ENST00000530310 KDM3AQ9Y4C1 1321 aa16.61■□□□□ 0.25
NR1H3-232ENST00000530310 TTC3P53804 2025 aa16.6■□□□□ 0.25
NR1H3-232ENST00000530310 IPO5O00410 1097 aaKnown RBP16.6■□□□□ 0.25
NR1H3-232ENST00000530310 RPS6KA5O75582 802 aa16.6■□□□□ 0.25
NR1H3-232ENST00000530310 CYP3A4P08684 503 aa16.6■□□□□ 0.25
NR1H3-232ENST00000530310 GTF2F1P35269 517 aaKnown RBP eCLIP16.6■□□□□ 0.25
NR1H3-232ENST00000530310 LTBRP36941 435 aa16.6■□□□□ 0.25
NR1H3-232ENST00000530310 AKAP17AQ02040 695 aaKnown RBP16.6■□□□□ 0.25
NR1H3-232ENST00000530310 ZNF484Q5JVG2 852 aa16.6■□□□□ 0.25
NR1H3-232ENST00000530310 TRMT1LQ7Z2T5 733 aaKnown RBP16.6■□□□□ 0.25
NR1H3-232ENST00000530310 REXO1Q8N1G1 1221 aaKnown RBP16.6■□□□□ 0.25
NR1H3-232ENST00000530310 CCDC12Q8WUD4 166 aaPredicted RBP16.6■□□□□ 0.25
NR1H3-232ENST00000530310 P2RX5Q93086 422 aa16.6■□□□□ 0.25
NR1H3-232ENST00000530310 NOC2LQ9Y3T9 749 aaKnown RBP16.6■□□□□ 0.25
NR1H3-232ENST00000530310 COL1A2P08123 1366 aa16.6■□□□□ 0.25
NR1H3-232ENST00000530310 TCHHQ07283 1943 aa16.59■□□□□ 0.25
NR1H3-232ENST00000530310 IGLV3-22A0A075B6J6 115 aa16.59■□□□□ 0.25
NR1H3-232ENST00000530310 ESYT2A0FGR8 921 aa16.59■□□□□ 0.25
NR1H3-232ENST00000530310 ADAMTS3O15072 1205 aa16.59■□□□□ 0.25
NR1H3-232ENST00000530310 DHX15O43143 795 aaKnown RBP16.59■□□□□ 0.25
NR1H3-232ENST00000530310 ITGB1P05556 798 aa16.59■□□□□ 0.25
NR1H3-232ENST00000530310 ALADP13716 330 aa16.59■□□□□ 0.25
NR1H3-232ENST00000530310 SARSP49591 514 aaKnown RBP16.59■□□□□ 0.25
NR1H3-232ENST00000530310 SETQ01105 290 aaPredicted RBP16.59■□□□□ 0.25
NR1H3-232ENST00000530310 ZP2Q05996 745 aa16.59■□□□□ 0.25
NR1H3-232ENST00000530310 DLX2Q07687 328 aaPredicted RBP16.59■□□□□ 0.25
NR1H3-232ENST00000530310 CTC1Q2NKJ3 1217 aa16.59■□□□□ 0.25
NR1H3-232ENST00000530310 KIAA0319LQ8IZA0 1049 aa16.59■□□□□ 0.25
NR1H3-232ENST00000530310 CRIPAKQ8N1N5 446 aa16.59■□□□□ 0.25
NR1H3-232ENST00000530310 KLHL23Q8NBE8 558 aa16.59■□□□□ 0.25
NR1H3-232ENST00000530310 PPP2R3CQ969Q6 453 aa16.59■□□□□ 0.25
NR1H3-232ENST00000530310 ZMYND12Q9H0C1 365 aa16.59■□□□□ 0.25
NR1H3-232ENST00000530310 CDHR5Q9HBB8 845 aa16.59■□□□□ 0.25
NR1H3-232ENST00000530310 ERVK-5Q9HDB9 667 aa16.59■□□□□ 0.25
NR1H3-232ENST00000530310 PCDHB7Q9Y5E2 793 aa16.59■□□□□ 0.25
NR1H3-232ENST00000530310 DENND3A2RUS2 1198 aa16.58■□□□□ 0.24
NR1H3-232ENST00000530310 LINC01565O15544 149 aa16.58■□□□□ 0.24
NR1H3-232ENST00000530310 MGEA5O60502 916 aa16.58■□□□□ 0.24
NR1H3-232ENST00000530310 PPFIA3O75145 1194 aa16.58■□□□□ 0.24
NR1H3-232ENST00000530310 ATP4AP20648 1035 aa16.58■□□□□ 0.24
NR1H3-232ENST00000530310 DNAJB1P25685 340 aa16.58■□□□□ 0.24
NR1H3-232ENST00000530310 GNA11P29992 359 aa16.58■□□□□ 0.24
NR1H3-232ENST00000530310 DNM1Q05193 864 aaKnown RBP16.58■□□□□ 0.24
NR1H3-232ENST00000530310 CAMK1Q14012 370 aa16.58■□□□□ 0.24
NR1H3-232ENST00000530310 SAFBQ15424 915 aaKnown RBP eCLIP16.58■□□□□ 0.24
NR1H3-232ENST00000530310 PRR16Q569H4 304 aa16.58■□□□□ 0.24
NR1H3-232ENST00000530310 NAALADL2Q58DX5 795 aa16.58■□□□□ 0.24
NR1H3-232ENST00000530310 ODR4Q5SWX8 454 aa16.58■□□□□ 0.24
NR1H3-232ENST00000530310 SPOUT1Q5T280 376 aaKnown RBP16.58■□□□□ 0.24
NR1H3-232ENST00000530310 FOXD4L5Q5VV16 416 aaPredicted RBP16.58■□□□□ 0.24
NR1H3-232ENST00000530310 MCTP2Q6DN12 878 aa16.58■□□□□ 0.24
NR1H3-232ENST00000530310 METTL13Q8N6R0 699 aa16.58■□□□□ 0.24
NR1H3-232ENST00000530310 SPPL3Q8TCT6 385 aa16.58■□□□□ 0.24
NR1H3-232ENST00000530310 RASGRP4Q8TDF6 673 aa16.58■□□□□ 0.24
NR1H3-232ENST00000530310 POF1BQ8WVV4 589 aa16.58■□□□□ 0.24
NR1H3-232ENST00000530310 TMEM40Q8WWA1 233 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms