RNA–Protein interactions for RNA: ENST00000525918.1

VPS26B-203, Transcript of VPS26, retromer complex component B, humanhuman

TSL 2

Gene VPS26B, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-203ENST00000525918 CRYGNQ8WXF5 182 aa12.13□□□□□ -0.47
VPS26B-203ENST00000525918 CDCA3Q99618 268 aaPredicted RBP12.13□□□□□ -0.47
VPS26B-203ENST00000525918 ZNF577Q9BSK1 485 aa12.13□□□□□ -0.47
VPS26B-203ENST00000525918 ELAC1Q9H777 363 aaKnown RBP12.13□□□□□ -0.47
VPS26B-203ENST00000525918 ATP6V0A4Q9HBG4 840 aa12.13□□□□□ -0.47
VPS26B-203ENST00000525918 FAM217BQ9NTX9 383 aaPredicted RBP12.13□□□□□ -0.47
VPS26B-203ENST00000525918 TYW1Q9NV66 732 aaKnown RBP12.13□□□□□ -0.47
VPS26B-203ENST00000525918 TMEM161AQ9NX61 479 aa12.13□□□□□ -0.47
VPS26B-203ENST00000525918 BARX2Q9UMQ3 279 aaPredicted RBP12.13□□□□□ -0.47
VPS26B-203ENST00000525918 MAFBQ9Y5Q3 323 aaPredicted RBP12.13□□□□□ -0.47
VPS26B-203ENST00000525918 TECTAO75443 2155 aa12.13□□□□□ -0.47
VPS26B-203ENST00000525918 CCDC196A0A1B0GTZ2 297 aa12.12□□□□□ -0.47
VPS26B-203ENST00000525918 ESYT2A0FGR8 921 aa12.12□□□□□ -0.47
VPS26B-203ENST00000525918 PER2O15055 1255 aa12.12□□□□□ -0.47
VPS26B-203ENST00000525918 C22orf31O95567 290 aa12.12□□□□□ -0.47
VPS26B-203ENST00000525918 PSAPP07602 524 aa12.12□□□□□ -0.47
VPS26B-203ENST00000525918 HMGB1P09429 215 aaKnown RBP12.12□□□□□ -0.47
VPS26B-203ENST00000525918 ERVFC1P60507 584 aa12.12□□□□□ -0.47
VPS26B-203ENST00000525918 SETQ01105 290 aaPredicted RBP12.12□□□□□ -0.47
VPS26B-203ENST00000525918 KRT32Q14532 448 aa12.12□□□□□ -0.47
VPS26B-203ENST00000525918 CBX2Q14781 532 aaPredicted RBP12.12□□□□□ -0.47
VPS26B-203ENST00000525918 PFKFB3Q16875 520 aaPredicted RBP12.12□□□□□ -0.47
VPS26B-203ENST00000525918 BMP2KLQ5H9B9 411 aa12.12□□□□□ -0.47
VPS26B-203ENST00000525918 TRIM67Q6ZTA4 783 aa12.12□□□□□ -0.47
VPS26B-203ENST00000525918 FAM228AQ86W67 206 aa12.12□□□□□ -0.47
VPS26B-203ENST00000525918 THNSL1Q8IYQ7 743 aa12.12□□□□□ -0.47
VPS26B-203ENST00000525918 RASEFQ8IZ41 740 aa12.12□□□□□ -0.47
VPS26B-203ENST00000525918 METTL13Q8N6R0 699 aa12.12□□□□□ -0.47
VPS26B-203ENST00000525918 COLGALT1Q8NBJ5 622 aa12.12□□□□□ -0.47
VPS26B-203ENST00000525918 CCDC12Q8WUD4 166 aaPredicted RBP12.12□□□□□ -0.47
VPS26B-203ENST00000525918 OSMRQ99650 979 aa12.12□□□□□ -0.47
VPS26B-203ENST00000525918 PHF7Q9BWX1 381 aaPredicted RBP12.12□□□□□ -0.47
VPS26B-203ENST00000525918 ZMYND12Q9H0C1 365 aa12.12□□□□□ -0.47
VPS26B-203ENST00000525918 C6orf50Q9HD87 102 aa12.12□□□□□ -0.47
VPS26B-203ENST00000525918 CEP131Q9UPN4 1083 aa12.12□□□□□ -0.47
VPS26B-203ENST00000525918 USP15Q9Y4E8 981 aaPredicted RBP12.12□□□□□ -0.47
VPS26B-203ENST00000525918 PCDHGC5Q9Y5F6 944 aa12.12□□□□□ -0.47
VPS26B-203ENST00000525918 PCDHA10Q9Y5I2 948 aa12.12□□□□□ -0.47
VPS26B-203ENST00000525918 PIEZO1Q92508 2521 aa12.12□□□□□ -0.47
VPS26B-203ENST00000525918 MAGEB2O15479 319 aa12.11□□□□□ -0.47
VPS26B-203ENST00000525918 GPR32O75388 356 aa12.11□□□□□ -0.47
VPS26B-203ENST00000525918 VTNP04004 478 aa12.11□□□□□ -0.47
VPS26B-203ENST00000525918 SRGAP2BP0DMP2 458 aa12.11□□□□□ -0.47
VPS26B-203ENST00000525918 ATF7P17544 494 aaPredicted RBP12.11□□□□□ -0.47
VPS26B-203ENST00000525918 LAG3P18627 525 aa12.11□□□□□ -0.47
VPS26B-203ENST00000525918 GNA11P29992 359 aa12.11□□□□□ -0.47
VPS26B-203ENST00000525918 ADD1P35611 737 aaKnown RBP12.11□□□□□ -0.47
VPS26B-203ENST00000525918 FGD1P98174 961 aa12.11□□□□□ -0.47
VPS26B-203ENST00000525918 PLCB3Q01970 1234 aa12.11□□□□□ -0.47
VPS26B-203ENST00000525918 DSC3Q14574 896 aa12.11□□□□□ -0.47
VPS26B-203ENST00000525918 PKN1Q16512 942 aa12.11□□□□□ -0.47
VPS26B-203ENST00000525918 DUSP6Q16828 381 aa12.11□□□□□ -0.47
VPS26B-203ENST00000525918 TRMT1LQ7Z2T5 733 aaKnown RBP12.11□□□□□ -0.47
VPS26B-203ENST00000525918 REXO1Q8N1G1 1221 aaKnown RBP12.11□□□□□ -0.47
VPS26B-203ENST00000525918 ZNF710Q8N1W2 664 aa12.11□□□□□ -0.47
VPS26B-203ENST00000525918 PBXIP1Q96AQ6 731 aa12.11□□□□□ -0.47
VPS26B-203ENST00000525918 PPP1R16BQ96T49 567 aa12.11□□□□□ -0.47
VPS26B-203ENST00000525918 CWH43Q9H720 699 aa12.11□□□□□ -0.47
VPS26B-203ENST00000525918 TCEAL9Q9UHQ7 104 aa12.11□□□□□ -0.47
VPS26B-203ENST00000525918 PUF60Q9UHX1 559 aaKnown RBP12.11□□□□□ -0.47
VPS26B-203ENST00000525918 NAP1L2Q9ULW6 460 aaPredicted RBP12.11□□□□□ -0.47
VPS26B-203ENST00000525918 LZTS1Q9Y250 596 aa12.11□□□□□ -0.47
VPS26B-203ENST00000525918 TMEM221A6NGB7 291 aa12.1□□□□□ -0.47
VPS26B-203ENST00000525918 M0R296 226 aa12.1□□□□□ -0.47
VPS26B-203ENST00000525918 FSCN2O14926 492 aa12.1□□□□□ -0.47
VPS26B-203ENST00000525918 HOXA2O43364 376 aa12.1□□□□□ -0.47
VPS26B-203ENST00000525918 FGFR1P11362 822 aa12.1□□□□□ -0.47
VPS26B-203ENST00000525918 ZSCAN20P17040 1043 aaPredicted RBP12.1□□□□□ -0.47
VPS26B-203ENST00000525918 TMOD1P28289 359 aa12.1□□□□□ -0.47
VPS26B-203ENST00000525918 METAP2P50579 478 aaKnown RBP eCLIP12.1□□□□□ -0.47
VPS26B-203ENST00000525918 NLRP11P59045 1033 aaKnown RBP12.1□□□□□ -0.47
VPS26B-203ENST00000525918 ZXDAP98168 799 aa12.1□□□□□ -0.47
VPS26B-203ENST00000525918 KCNC3Q14003 757 aa12.1□□□□□ -0.47
VPS26B-203ENST00000525918 TMEM184AQ6ZMB5 413 aa12.1□□□□□ -0.47
VPS26B-203ENST00000525918 VN1R2Q8NFZ6 395 aa12.1□□□□□ -0.47
VPS26B-203ENST00000525918 RASGRP4Q8TDF6 673 aa12.1□□□□□ -0.47
VPS26B-203ENST00000525918 SUSD6Q92537 303 aa12.1□□□□□ -0.47
VPS26B-203ENST00000525918 MRPS27Q92552 414 aaKnown RBP12.1□□□□□ -0.47
VPS26B-203ENST00000525918 RPGRIP1Q96KN7 1286 aa12.1□□□□□ -0.47
VPS26B-203ENST00000525918 FAM167AQ96KS9 214 aa12.1□□□□□ -0.47
VPS26B-203ENST00000525918 TMEM117Q9H0C3 514 aa12.1□□□□□ -0.47
VPS26B-203ENST00000525918 NGRNQ9NPE2 291 aaKnown RBP12.1□□□□□ -0.47
VPS26B-203ENST00000525918 HCSTQ9UBK5 93 aa12.1□□□□□ -0.47
VPS26B-203ENST00000525918 GABBR1Q9UBS5 961 aa12.1□□□□□ -0.47
VPS26B-203ENST00000525918 SAMM50Q9Y512 469 aa12.1□□□□□ -0.47
VPS26B-203ENST00000525918 KMT2EQ8IZD2 1858 aa12.1□□□□□ -0.47
VPS26B-203ENST00000525918 PRPF3O43395 683 aaKnown RBP12.09□□□□□ -0.47
VPS26B-203ENST00000525918 EIF4BP23588 611 aaKnown RBP12.09□□□□□ -0.47
VPS26B-203ENST00000525918 CIITAP33076 1130 aa12.09□□□□□ -0.47
VPS26B-203ENST00000525918 RBM10P98175 930 aaKnown RBP12.09□□□□□ -0.47
VPS26B-203ENST00000525918 KRT17Q04695 432 aa12.09□□□□□ -0.47
VPS26B-203ENST00000525918 PRR16Q569H4 304 aa12.09□□□□□ -0.47
VPS26B-203ENST00000525918 EFCAB12Q6NXP0 572 aa12.09□□□□□ -0.47
VPS26B-203ENST00000525918 BICD2Q8TD16 824 aa12.09□□□□□ -0.47
VPS26B-203ENST00000525918 CASD1Q96PB1 797 aa12.09□□□□□ -0.47
VPS26B-203ENST00000525918 MAP7D2Q96T17 732 aa12.09□□□□□ -0.47
VPS26B-203ENST00000525918 PRRX2Q99811 253 aa12.09□□□□□ -0.47
VPS26B-203ENST00000525918 TCF25Q9BQ70 676 aa12.09□□□□□ -0.47
VPS26B-203ENST00000525918 NRBP2Q9NSY0 501 aa12.09□□□□□ -0.47
VPS26B-203ENST00000525918 AKT3Q9Y243 479 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms