RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 MTHFRP42898 656 aa8.22□□□□□ -1.09
HDAC3-216ENST00000523088 POLD2P49005 469 aa8.22□□□□□ -1.09
HDAC3-216ENST00000523088 RGS19P49795 217 aa8.22□□□□□ -1.09
HDAC3-216ENST00000523088 KPNA1P52294 538 aaPredicted RBP8.22□□□□□ -1.09
HDAC3-216ENST00000523088 GTF2A2P52657 109 aa8.22□□□□□ -1.09
HDAC3-216ENST00000523088 CLNS1AP54105 237 aaKnown RBP8.22□□□□□ -1.09
HDAC3-216ENST00000523088 MAP3K9P80192 1104 aa8.22□□□□□ -1.09
HDAC3-216ENST00000523088 MRPS35P82673 323 aaKnown RBP8.22□□□□□ -1.09
HDAC3-216ENST00000523088 HNRNPUQ00839 825 aaKnown RBP eCLIP8.22□□□□□ -1.09
HDAC3-216ENST00000523088 PRKG1Q13976 671 aa8.22□□□□□ -1.09
HDAC3-216ENST00000523088 ANKRD1Q15327 319 aa8.22□□□□□ -1.09
HDAC3-216ENST00000523088 SAFBQ15424 915 aaKnown RBP eCLIP8.22□□□□□ -1.09
HDAC3-216ENST00000523088 C15orf59Q2T9L4 293 aaPredicted RBP8.22□□□□□ -1.09
HDAC3-216ENST00000523088 NDUFAF5Q5TEU4 345 aa8.22□□□□□ -1.09
HDAC3-216ENST00000523088 SWSAP1Q6NVH7 229 aa8.22□□□□□ -1.09
HDAC3-216ENST00000523088 HIBCHQ6NVY1 386 aaPredicted RBP8.22□□□□□ -1.09
HDAC3-216ENST00000523088 RAPH1Q70E73 1250 aa8.22□□□□□ -1.09
HDAC3-216ENST00000523088 FERMT3Q86UX7 667 aa8.22□□□□□ -1.09
HDAC3-216ENST00000523088 IFNL1Q8IU54 200 aa8.22□□□□□ -1.09
HDAC3-216ENST00000523088 SPATA2LQ8IUW3 424 aaPredicted RBP8.22□□□□□ -1.09
HDAC3-216ENST00000523088 SLC15A3Q8IY34 581 aa8.22□□□□□ -1.09
HDAC3-216ENST00000523088 VPS52Q8N1B4 723 aa8.22□□□□□ -1.09
HDAC3-216ENST00000523088 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.22□□□□□ -1.09
HDAC3-216ENST00000523088 FAM151AQ8WW52 585 aa8.22□□□□□ -1.09
HDAC3-216ENST00000523088 ERO1AQ96HE7 468 aa8.22□□□□□ -1.09
HDAC3-216ENST00000523088 CABS1Q96KC9 395 aa8.22□□□□□ -1.09
HDAC3-216ENST00000523088 C16orf45Q96MC5 204 aaPredicted RBP8.22□□□□□ -1.09
HDAC3-216ENST00000523088 TSGA13Q96PP4 275 aa8.22□□□□□ -1.09
HDAC3-216ENST00000523088 PSKH2Q96QS6 385 aa8.22□□□□□ -1.09
HDAC3-216ENST00000523088 NELL2Q99435 816 aa8.22□□□□□ -1.09
HDAC3-216ENST00000523088 CENPOQ9BU64 300 aa8.22□□□□□ -1.09
HDAC3-216ENST00000523088 PARD6BQ9BYG5 372 aa8.22□□□□□ -1.09
HDAC3-216ENST00000523088 UBXN6Q9BZV1 441 aa8.22□□□□□ -1.09
HDAC3-216ENST00000523088 VCPKMTQ9H867 229 aa8.22□□□□□ -1.09
HDAC3-216ENST00000523088 ZWILCHQ9H900 591 aa8.22□□□□□ -1.09
HDAC3-216ENST00000523088 NGRNQ9NPE2 291 aaKnown RBP8.22□□□□□ -1.09
HDAC3-216ENST00000523088 HERC5Q9UII4 1024 aaKnown RBP8.22□□□□□ -1.09
HDAC3-216ENST00000523088 TMCO1Q9UM00 188 aa8.22□□□□□ -1.09
HDAC3-216ENST00000523088 ZNF711Q9Y462 761 aa8.22□□□□□ -1.09
HDAC3-216ENST00000523088 TIMM22Q9Y584 194 aa8.22□□□□□ -1.09
HDAC3-216ENST00000523088 MYPNQ86TC9 1320 aa8.22□□□□□ -1.09
HDAC3-216ENST00000523088 RBBP6Q7Z6E9 1792 aaKnown RBP8.21□□□□□ -1.1
HDAC3-216ENST00000523088 BIRC5O15392 142 aa8.21□□□□□ -1.1
HDAC3-216ENST00000523088 YKT6O15498 198 aa8.21□□□□□ -1.1
HDAC3-216ENST00000523088 TMCC2O75069 709 aa8.21□□□□□ -1.1
HDAC3-216ENST00000523088 TSC22D2O75157 780 aa8.21□□□□□ -1.1
HDAC3-216ENST00000523088 PARP1P09874 1014 aaKnown RBP8.21□□□□□ -1.1
HDAC3-216ENST00000523088 RHOXF2BP0C7M4 288 aa8.21□□□□□ -1.1
HDAC3-216ENST00000523088 PLCG2P16885 1265 aa8.21□□□□□ -1.1
HDAC3-216ENST00000523088 TMOD1P28289 359 aa8.21□□□□□ -1.1
HDAC3-216ENST00000523088 GSTO1P78417 241 aa8.21□□□□□ -1.1
HDAC3-216ENST00000523088 PLIN5Q00G26 463 aa8.21□□□□□ -1.1
HDAC3-216ENST00000523088 MLLT1Q03111 559 aaPredicted RBP8.21□□□□□ -1.1
HDAC3-216ENST00000523088 MORC3Q14149 939 aa8.21□□□□□ -1.1
HDAC3-216ENST00000523088 BBS9Q3SYG4 887 aa8.21□□□□□ -1.1
HDAC3-216ENST00000523088 RILPL1Q5EBL4 403 aa8.21□□□□□ -1.1
HDAC3-216ENST00000523088 CCDC102BQ68D86 513 aa8.21□□□□□ -1.1
HDAC3-216ENST00000523088 GALNT17Q6IS24 598 aa8.21□□□□□ -1.1
HDAC3-216ENST00000523088 APOBEC3HQ6NTF7 200 aaKnown RBP8.21□□□□□ -1.1
HDAC3-216ENST00000523088 FBXO46Q6PJ61 603 aaPredicted RBP8.21□□□□□ -1.1
HDAC3-216ENST00000523088 ZNF598Q86UK7 904 aaKnown RBP8.21□□□□□ -1.1
HDAC3-216ENST00000523088 GAS2L3Q86XJ1 694 aa8.21□□□□□ -1.1
HDAC3-216ENST00000523088 DDX42Q86XP3 938 aaKnown RBP eCLIP8.21□□□□□ -1.1
HDAC3-216ENST00000523088 ERO1BQ86YB8 467 aa8.21□□□□□ -1.1
HDAC3-216ENST00000523088 CPXCR1Q8N123 301 aa8.21□□□□□ -1.1
HDAC3-216ENST00000523088 GALNT15Q8N3T1 639 aa8.21□□□□□ -1.1
HDAC3-216ENST00000523088 ZNF296Q8WUU4 475 aaPredicted RBP8.21□□□□□ -1.1
HDAC3-216ENST00000523088 GTF3C6Q969F1 213 aa8.21□□□□□ -1.1
HDAC3-216ENST00000523088 SNX21Q969T3 373 aa8.21□□□□□ -1.1
HDAC3-216ENST00000523088 OPTNQ96CV9 577 aa8.21□□□□□ -1.1
HDAC3-216ENST00000523088 TEPSINQ96N21 525 aa8.21□□□□□ -1.1
HDAC3-216ENST00000523088 CCT7Q99832 543 aa8.21□□□□□ -1.1
HDAC3-216ENST00000523088 RHOXF2Q9BQY4 288 aa8.21□□□□□ -1.1
HDAC3-216ENST00000523088 AP1M1Q9BXS5 423 aa8.21□□□□□ -1.1
HDAC3-216ENST00000523088 ZNF341Q9BYN7 854 aa8.21□□□□□ -1.1
HDAC3-216ENST00000523088 SMARCAD1Q9H4L7 1026 aa8.21□□□□□ -1.1
HDAC3-216ENST00000523088 DNAJC18Q9H819 358 aa8.21□□□□□ -1.1
HDAC3-216ENST00000523088 ATP6V0A4Q9HBG4 840 aa8.21□□□□□ -1.1
HDAC3-216ENST00000523088 PAPOLBQ9NRJ5 636 aaKnown RBP8.21□□□□□ -1.1
HDAC3-216ENST00000523088 AASDHPPTQ9NRN7 309 aa8.21□□□□□ -1.1
HDAC3-216ENST00000523088 GRID1Q9ULK0 1009 aa8.21□□□□□ -1.1
HDAC3-216ENST00000523088 ATXN2Q99700 1313 aaKnown RBP8.21□□□□□ -1.1
HDAC3-216ENST00000523088 PDE4DIPQ5VU43 2346 aa8.2□□□□□ -1.1
HDAC3-216ENST00000523088 COL2A1P02458 1487 aaPredicted RBP8.2□□□□□ -1.1
HDAC3-216ENST00000523088 DOCK1Q14185 1865 aa8.2□□□□□ -1.1
HDAC3-216ENST00000523088 TMEM247A6NEH6 219 aa8.2□□□□□ -1.1
HDAC3-216ENST00000523088 TRIM64A6NGJ6 449 aa8.2□□□□□ -1.1
HDAC3-216ENST00000523088 TRIM64BA6NI03 449 aa8.2□□□□□ -1.1
HDAC3-216ENST00000523088 SPDYE5A6NIY4 337 aa8.2□□□□□ -1.1
HDAC3-216ENST00000523088 TNFRSF10BO14763 440 aa8.2□□□□□ -1.1
HDAC3-216ENST00000523088 IDH3BO43837 385 aa8.2□□□□□ -1.1
HDAC3-216ENST00000523088 ENTPD3O75355 529 aa8.2□□□□□ -1.1
HDAC3-216ENST00000523088 ABL1P00519 1130 aa8.2□□□□□ -1.1
HDAC3-216ENST00000523088 CAPNS1P04632 268 aa8.2□□□□□ -1.1
HDAC3-216ENST00000523088 UQCRFS1P1P0C7P4 283 aa8.2□□□□□ -1.1
HDAC3-216ENST00000523088 CETPP11597 493 aa8.2□□□□□ -1.1
HDAC3-216ENST00000523088 HOXB1P14653 301 aaPredicted RBP8.2□□□□□ -1.1
HDAC3-216ENST00000523088 GLULP15104 373 aa8.2□□□□□ -1.1
HDAC3-216ENST00000523088 GBP2P32456 591 aaPredicted RBP8.2□□□□□ -1.1
HDAC3-216ENST00000523088 HOXD12P35452 270 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms