RNA–Protein interactions for RNA: ENST00000510356.5

CALCOCO2-217, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 1 (best)

Gene CALCOCO2, Length 1,009 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-217ENST00000510356 RMDN3Q96TC7 470 aa9.62□□□□□ -0.87
CALCOCO2-217ENST00000510356 TUT1Q9H6E5 874 aaKnown RBP9.62□□□□□ -0.87
CALCOCO2-217ENST00000510356 BARX2Q9UMQ3 279 aaPredicted RBP9.62□□□□□ -0.87
CALCOCO2-217ENST00000510356 NOVA2Q9UNW9 492 aaKnown RBP9.62□□□□□ -0.87
CALCOCO2-217ENST00000510356 HRH3Q9Y5N1 445 aa9.62□□□□□ -0.87
CALCOCO2-217ENST00000510356 MYO7AQ13402 2215 aa9.62□□□□□ -0.87
CALCOCO2-217ENST00000510356 ABCB11O95342 1321 aa9.61□□□□□ -0.87
CALCOCO2-217ENST00000510356 ENPP3O14638 875 aa9.61□□□□□ -0.87
CALCOCO2-217ENST00000510356 RANBP6O60518 1105 aaKnown RBP9.61□□□□□ -0.87
CALCOCO2-217ENST00000510356 DGKIO75912 1065 aa9.61□□□□□ -0.87
CALCOCO2-217ENST00000510356 KRT37O76014 449 aa9.61□□□□□ -0.87
CALCOCO2-217ENST00000510356 LMNAP02545 664 aaKnown RBP9.61□□□□□ -0.87
CALCOCO2-217ENST00000510356 CHGBP05060 677 aa9.61□□□□□ -0.87
CALCOCO2-217ENST00000510356 RPLP2P05387 115 aaKnown RBP9.61□□□□□ -0.87
CALCOCO2-217ENST00000510356 ITGB1P05556 798 aa9.61□□□□□ -0.87
CALCOCO2-217ENST00000510356 CTSHP09668 335 aa9.61□□□□□ -0.87
CALCOCO2-217ENST00000510356 LINC00271P0C7V0 271 aa9.61□□□□□ -0.87
CALCOCO2-217ENST00000510356 STAG3L1P0CL83 205 aa9.61□□□□□ -0.87
CALCOCO2-217ENST00000510356 HOXC8P31273 242 aa9.61□□□□□ -0.87
CALCOCO2-217ENST00000510356 NOVP48745 357 aa9.61□□□□□ -0.87
CALCOCO2-217ENST00000510356 SEC13P55735 322 aa9.61□□□□□ -0.87
CALCOCO2-217ENST00000510356 CAMK1Q14012 370 aa9.61□□□□□ -0.87
CALCOCO2-217ENST00000510356 TTBK2Q6IQ55 1244 aa9.61□□□□□ -0.87
CALCOCO2-217ENST00000510356 RBM23Q86U06 439 aaKnown RBP9.61□□□□□ -0.87
CALCOCO2-217ENST00000510356 RSPH3Q86UC2 560 aa9.61□□□□□ -0.87
CALCOCO2-217ENST00000510356 KLHL23Q8NBE8 558 aa9.61□□□□□ -0.87
CALCOCO2-217ENST00000510356 RNF217Q8TC41 542 aa9.61□□□□□ -0.87
CALCOCO2-217ENST00000510356 POF1BQ8WVV4 589 aa9.61□□□□□ -0.87
CALCOCO2-217ENST00000510356 RMDN1Q96DB5 314 aa9.61□□□□□ -0.87
CALCOCO2-217ENST00000510356 NECTIN4Q96NY8 510 aa9.61□□□□□ -0.87
CALCOCO2-217ENST00000510356 USP26Q9BXU7 913 aa9.61□□□□□ -0.87
CALCOCO2-217ENST00000510356 MLXIPQ9HAP2 919 aa9.61□□□□□ -0.87
CALCOCO2-217ENST00000510356 RC3H2Q9HBD1 1191 aaKnown RBP9.61□□□□□ -0.87
CALCOCO2-217ENST00000510356 EPB41L4AQ9HCS5 686 aaPredicted RBP9.61□□□□□ -0.87
CALCOCO2-217ENST00000510356 IL17RBQ9NRM6 502 aa9.61□□□□□ -0.87
CALCOCO2-217ENST00000510356 PLXNA3P51805 1871 aa9.61□□□□□ -0.87
CALCOCO2-217ENST00000510356 GVINP1Q7Z2Y8 2422 aa9.61□□□□□ -0.87
CALCOCO2-217ENST00000510356 BACH1O14867 736 aa9.6□□□□□ -0.87
CALCOCO2-217ENST00000510356 TREHO43280 583 aa9.6□□□□□ -0.87
CALCOCO2-217ENST00000510356 CSPG5O95196 566 aa9.6□□□□□ -0.87
CALCOCO2-217ENST00000510356 GLP2RO95838 553 aa9.6□□□□□ -0.87
CALCOCO2-217ENST00000510356 PDGFBP01127 241 aaPredicted RBP9.6□□□□□ -0.87
CALCOCO2-217ENST00000510356 SMIM10L2AP0DMW4 78 aa9.6□□□□□ -0.87
CALCOCO2-217ENST00000510356 SMIM10L2BP0DMW5 78 aa9.6□□□□□ -0.87
CALCOCO2-217ENST00000510356 HSPD1P10809 573 aaKnown RBP9.6□□□□□ -0.87
CALCOCO2-217ENST00000510356 SNRPBP14678 240 aaKnown RBP9.6□□□□□ -0.87
CALCOCO2-217ENST00000510356 GPC1P35052 558 aa9.6□□□□□ -0.87
CALCOCO2-217ENST00000510356 SMTNP53814 917 aa9.6□□□□□ -0.87
CALCOCO2-217ENST00000510356 CELF3Q5SZQ8 465 aaKnown RBP9.6□□□□□ -0.87
CALCOCO2-217ENST00000510356 GPATCH4Q5T3I0 446 aaKnown RBP9.6□□□□□ -0.87
CALCOCO2-217ENST00000510356 TMEM184AQ6ZMB5 413 aa9.6□□□□□ -0.87
CALCOCO2-217ENST00000510356 ADGRD2Q7Z7M1 963 aa9.6□□□□□ -0.87
CALCOCO2-217ENST00000510356 SYTL5Q8TDW5 730 aaPredicted RBP9.6□□□□□ -0.87
CALCOCO2-217ENST00000510356 ATP8B4Q8TF62 1192 aa9.6□□□□□ -0.87
CALCOCO2-217ENST00000510356 GPATCH3Q96I76 525 aa9.6□□□□□ -0.87
CALCOCO2-217ENST00000510356 TAAR1Q96RJ0 339 aa9.6□□□□□ -0.87
CALCOCO2-217ENST00000510356 RTP3Q9BQQ7 232 aa9.6□□□□□ -0.87
CALCOCO2-217ENST00000510356 C16orf70Q9BSU1 422 aa9.6□□□□□ -0.87
CALCOCO2-217ENST00000510356 FTHL17Q9BXU8 183 aa9.6□□□□□ -0.87
CALCOCO2-217ENST00000510356 RNPEPQ9H4A4 650 aa9.6□□□□□ -0.87
CALCOCO2-217ENST00000510356 MAP3K20Q9NYL2 800 aaKnown RBP9.6□□□□□ -0.87
CALCOCO2-217ENST00000510356 DNMT3LQ9UJW3 386 aa9.6□□□□□ -0.87
CALCOCO2-217ENST00000510356 MRPL11Q9Y3B7 192 aaKnown RBP9.6□□□□□ -0.87
CALCOCO2-217ENST00000510356 PCDHB12Q9Y5F1 795 aa9.6□□□□□ -0.87
CALCOCO2-217ENST00000510356 PCDHGC5Q9Y5F6 944 aa9.6□□□□□ -0.87
CALCOCO2-217ENST00000510356 SOBPA7XYQ1 873 aa9.59□□□□□ -0.87
CALCOCO2-217ENST00000510356 NOP56O00567 594 aaKnown RBP9.59□□□□□ -0.87
CALCOCO2-217ENST00000510356 ZNF543Q08ER8 600 aa9.59□□□□□ -0.87
CALCOCO2-217ENST00000510356 ELOAQ14241 798 aaKnown RBP9.59□□□□□ -0.87
CALCOCO2-217ENST00000510356 TLR1Q15399 786 aa9.59□□□□□ -0.87
CALCOCO2-217ENST00000510356 USH1GQ495M9 461 aa9.59□□□□□ -0.87
CALCOCO2-217ENST00000510356 CES5AQ6NT32 575 aa9.59□□□□□ -0.87
CALCOCO2-217ENST00000510356 TAF2Q6P1X5 1199 aa9.59□□□□□ -0.87
CALCOCO2-217ENST00000510356 ZC3H14Q6PJT7 736 aaKnown RBP9.59□□□□□ -0.87
CALCOCO2-217ENST00000510356 NPAS4Q8IUM7 802 aa9.59□□□□□ -0.87
CALCOCO2-217ENST00000510356 SAMD3Q8N6K7 520 aa9.59□□□□□ -0.87
CALCOCO2-217ENST00000510356 FAM200AQ8TCP9 573 aa9.59□□□□□ -0.87
CALCOCO2-217ENST00000510356 TTC14Q96N46 770 aa9.59□□□□□ -0.87
CALCOCO2-217ENST00000510356 CNTNAP3BQ96NU0 1288 aa9.59□□□□□ -0.87
CALCOCO2-217ENST00000510356 ZSCAN10Q96SZ4 725 aaPredicted RBP9.59□□□□□ -0.87
CALCOCO2-217ENST00000510356 CNTNAP3Q9BZ76 1288 aa9.59□□□□□ -0.87
CALCOCO2-217ENST00000510356 GRIP2Q9C0E4 1043 aa9.59□□□□□ -0.87
CALCOCO2-217ENST00000510356 CHMP4BQ9H444 224 aaKnown RBP9.59□□□□□ -0.87
CALCOCO2-217ENST00000510356 EHMT1Q9H9B1 1298 aa9.59□□□□□ -0.87
CALCOCO2-217ENST00000510356 ECHDC1Q9NTX5 307 aa9.59□□□□□ -0.87
CALCOCO2-217ENST00000510356 TCP11L1Q9NUJ3 509 aa9.59□□□□□ -0.87
CALCOCO2-217ENST00000510356 ZNF215Q9UL58 517 aaPredicted RBP9.59□□□□□ -0.87
CALCOCO2-217ENST00000510356 ZMIZ1Q9ULJ6 1067 aa9.59□□□□□ -0.87
CALCOCO2-217ENST00000510356 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.59□□□□□ -0.87
CALCOCO2-217ENST00000510356 NLRC5Q86WI3 1866 aa9.59□□□□□ -0.87
CALCOCO2-217ENST00000510356 FRMPD2Q68DX3 1309 aaPredicted RBP9.58□□□□□ -0.88
CALCOCO2-217ENST00000510356 CCDC171Q6TFL3 1326 aa9.58□□□□□ -0.88
CALCOCO2-217ENST00000510356 LCTP09848 1927 aa9.58□□□□□ -0.88
CALCOCO2-217ENST00000510356 ORC4O43929 436 aa9.58□□□□□ -0.88
CALCOCO2-217ENST00000510356 MAN1A2O60476 641 aa9.58□□□□□ -0.88
CALCOCO2-217ENST00000510356 NMT2O60551 498 aa9.58□□□□□ -0.88
CALCOCO2-217ENST00000510356 GGPS1O95749 300 aa9.58□□□□□ -0.88
CALCOCO2-217ENST00000510356 PDHBP11177 359 aa9.58□□□□□ -0.88
CALCOCO2-217ENST00000510356 DNAJB1P25685 340 aa9.58□□□□□ -0.88
CALCOCO2-217ENST00000510356 TECP42680 631 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms