RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 IL18BPO95998 194 aa5.38□□□□□ -1.55
PDLIM1P4-201ENST00000504327 C4BPAP04003 597 aaKnown RBP5.38□□□□□ -1.55
PDLIM1P4-201ENST00000504327 MC4RP32245 332 aa5.38□□□□□ -1.55
PDLIM1P4-201ENST00000504327 GJA4P35212 333 aa5.38□□□□□ -1.55
PDLIM1P4-201ENST00000504327 GNALP38405 381 aa5.38□□□□□ -1.55
PDLIM1P4-201ENST00000504327 LACTBP83111 547 aaPredicted RBP5.38□□□□□ -1.55
PDLIM1P4-201ENST00000504327 KIAA2012Q0VF49 1180 aa5.38□□□□□ -1.55
PDLIM1P4-201ENST00000504327 SEC23AQ15436 765 aa5.38□□□□□ -1.55
PDLIM1P4-201ENST00000504327 ZRSR2Q15696 482 aaKnown RBP5.38□□□□□ -1.55
PDLIM1P4-201ENST00000504327 MAP9Q49MG5 647 aa5.38□□□□□ -1.55
PDLIM1P4-201ENST00000504327 TM4SF20Q53R12 229 aa5.38□□□□□ -1.55
PDLIM1P4-201ENST00000504327 ERICH6BQ5W0A0 696 aa5.38□□□□□ -1.55
PDLIM1P4-201ENST00000504327 BORAQ6PGQ7 559 aa5.38□□□□□ -1.55
PDLIM1P4-201ENST00000504327 CLEC4GQ6UXB4 293 aa5.38□□□□□ -1.55
PDLIM1P4-201ENST00000504327 C16orf86Q6ZW13 317 aa5.38□□□□□ -1.55
PDLIM1P4-201ENST00000504327 FAM124AQ86V42 546 aa5.38□□□□□ -1.55
PDLIM1P4-201ENST00000504327 NOSTRINQ8IVI9 506 aa5.38□□□□□ -1.55
PDLIM1P4-201ENST00000504327 WDR75Q8IWA0 830 aaKnown RBP5.38□□□□□ -1.55
PDLIM1P4-201ENST00000504327 LGI4Q8N135 537 aa5.38□□□□□ -1.55
PDLIM1P4-201ENST00000504327 IGDCC4Q8TDY8 1250 aa5.38□□□□□ -1.55
PDLIM1P4-201ENST00000504327 CLUHP3Q96NS8 147 aa5.38□□□□□ -1.55
PDLIM1P4-201ENST00000504327 NAP1L4Q99733 375 aaKnown RBP5.38□□□□□ -1.55
PDLIM1P4-201ENST00000504327 TACO1Q9BSH4 297 aaKnown RBP5.38□□□□□ -1.55
PDLIM1P4-201ENST00000504327 CELF4Q9BZC1 486 aaKnown RBP5.38□□□□□ -1.55
PDLIM1P4-201ENST00000504327 UHRF1BP1LA0JNW5 1464 aa5.38□□□□□ -1.55
PDLIM1P4-201ENST00000504327 CCDC189A1A4V9 331 aa5.37□□□□□ -1.55
PDLIM1P4-201ENST00000504327 CLASP2O75122 1294 aaKnown RBP5.37□□□□□ -1.55
PDLIM1P4-201ENST00000504327 KLHL18O94889 574 aa5.37□□□□□ -1.55
PDLIM1P4-201ENST00000504327 KNG1P01042 644 aa5.37□□□□□ -1.55
PDLIM1P4-201ENST00000504327 APPP05067 770 aa5.37□□□□□ -1.55
PDLIM1P4-201ENST00000504327 KRT18P05783 430 aaKnown RBP5.37□□□□□ -1.55
PDLIM1P4-201ENST00000504327 KCNA6P17658 529 aa5.37□□□□□ -1.55
PDLIM1P4-201ENST00000504327 PLP2Q04941 152 aa5.37□□□□□ -1.55
PDLIM1P4-201ENST00000504327 FOXD4Q12950 439 aaPredicted RBP5.37□□□□□ -1.55
PDLIM1P4-201ENST00000504327 TMEM177Q53S58 311 aa5.37□□□□□ -1.55
PDLIM1P4-201ENST00000504327 HHIPL2Q6UWX4 724 aa5.37□□□□□ -1.55
PDLIM1P4-201ENST00000504327 OVCH1Q7RTY7 1134 aa5.37□□□□□ -1.55
PDLIM1P4-201ENST00000504327 SAMD3Q8N6K7 520 aa5.37□□□□□ -1.55
PDLIM1P4-201ENST00000504327 IGSF22Q8N9C0 903 aa5.37□□□□□ -1.55
PDLIM1P4-201ENST00000504327 SENP7Q9BQF6 1050 aa5.37□□□□□ -1.55
PDLIM1P4-201ENST00000504327 ARHGAP28Q9P2N2 729 aa5.37□□□□□ -1.55
PDLIM1P4-201ENST00000504327 THRAP3Q9Y2W1 955 aaKnown RBP5.37□□□□□ -1.55
PDLIM1P4-201ENST00000504327 UACAQ9BZF9 1416 aa5.37□□□□□ -1.55
PDLIM1P4-201ENST00000504327 PLB1Q6P1J6 1458 aa5.37□□□□□ -1.55
PDLIM1P4-201ENST00000504327 SCDO00767 359 aa5.36□□□□□ -1.55
PDLIM1P4-201ENST00000504327 AOAHP28039 575 aa5.36□□□□□ -1.55
PDLIM1P4-201ENST00000504327 NFATC3Q12968 1075 aa5.36□□□□□ -1.55
PDLIM1P4-201ENST00000504327 HLTFQ14527 1009 aaKnown RBP eCLIP5.36□□□□□ -1.55
PDLIM1P4-201ENST00000504327 BRD3Q15059 726 aa5.36□□□□□ -1.55
PDLIM1P4-201ENST00000504327 PPP2R5AQ15172 486 aa5.36□□□□□ -1.55
PDLIM1P4-201ENST00000504327 VPS72Q15906 364 aa5.36□□□□□ -1.55
PDLIM1P4-201ENST00000504327 TBC1D10BQ4KMP7 808 aaPredicted RBP5.36□□□□□ -1.55
PDLIM1P4-201ENST00000504327 KRBA2Q6ZNG9 492 aa5.36□□□□□ -1.55
PDLIM1P4-201ENST00000504327 GPR155Q7Z3F1 870 aa5.36□□□□□ -1.55
PDLIM1P4-201ENST00000504327 KRT26Q7Z3Y9 468 aa5.36□□□□□ -1.55
PDLIM1P4-201ENST00000504327 KLHL36Q8N4N3 616 aa5.36□□□□□ -1.55
PDLIM1P4-201ENST00000504327 IL17RAQ96F46 866 aa5.36□□□□□ -1.55
PDLIM1P4-201ENST00000504327 TMEM260Q9NX78 707 aa5.36□□□□□ -1.55
PDLIM1P4-201ENST00000504327 DISP3Q9P2K9 1392 aa5.36□□□□□ -1.55
PDLIM1P4-201ENST00000504327 FHOD3Q2V2M9 1422 aa5.36□□□□□ -1.55
PDLIM1P4-201ENST00000504327 ABCC2Q92887 1545 aa5.36□□□□□ -1.55
PDLIM1P4-201ENST00000504327 ABCA8O94911 1581 aa5.36□□□□□ -1.55
PDLIM1P4-201ENST00000504327 EFCAB5A4FU69 1503 aa5.35□□□□□ -1.55
PDLIM1P4-201ENST00000504327 MAPKBP1O60336 1514 aa5.35□□□□□ -1.55
PDLIM1P4-201ENST00000504327 KDM5BQ9UGL1 1544 aa5.35□□□□□ -1.55
PDLIM1P4-201ENST00000504327 ARHGAP35Q9NRY4 1499 aa5.35□□□□□ -1.55
PDLIM1P4-201ENST00000504327 K7ESM1 405 aa5.35□□□□□ -1.55
PDLIM1P4-201ENST00000504327 DNAJC8O75937 253 aaPredicted RBP5.35□□□□□ -1.55
PDLIM1P4-201ENST00000504327 LDHAP00338 332 aaKnown RBP5.35□□□□□ -1.55
PDLIM1P4-201ENST00000504327 PLATP00750 562 aa5.35□□□□□ -1.55
PDLIM1P4-201ENST00000504327 HSP90AA1P07900 732 aaKnown RBP5.35□□□□□ -1.55
PDLIM1P4-201ENST00000504327 MMEP08473 750 aa5.35□□□□□ -1.55
PDLIM1P4-201ENST00000504327 PTGS1P23219 599 aa5.35□□□□□ -1.55
PDLIM1P4-201ENST00000504327 CNGA1P29973 690 aa5.35□□□□□ -1.55
PDLIM1P4-201ENST00000504327 EPHB1P54762 984 aa5.35□□□□□ -1.55
PDLIM1P4-201ENST00000504327 DHX8Q14562 1220 aaKnown RBP5.35□□□□□ -1.55
PDLIM1P4-201ENST00000504327 ZNF460Q14592 562 aa5.35□□□□□ -1.55
PDLIM1P4-201ENST00000504327 WDR78Q5VTH9 848 aa5.35□□□□□ -1.55
PDLIM1P4-201ENST00000504327 PKN3Q6P5Z2 889 aa5.35□□□□□ -1.55
PDLIM1P4-201ENST00000504327 KBTBD2Q8IY47 623 aa5.35□□□□□ -1.55
PDLIM1P4-201ENST00000504327 MPHOSPH6Q99547 160 aaKnown RBP5.35□□□□□ -1.55
PDLIM1P4-201ENST00000504327 KRTAP4-9Q9BYQ8 210 aa5.35□□□□□ -1.55
PDLIM1P4-201ENST00000504327 BARX1Q9HBU1 254 aaPredicted RBP5.35□□□□□ -1.55
PDLIM1P4-201ENST00000504327 BTBD7Q9P203 1132 aa5.35□□□□□ -1.55
PDLIM1P4-201ENST00000504327 ZDHHC9Q9Y397 364 aa5.35□□□□□ -1.55
PDLIM1P4-201ENST00000504327 TNPO3Q9Y5L0 923 aaKnown RBP5.35□□□□□ -1.55
PDLIM1P4-201ENST00000504327 ZNF536O15090 1300 aa5.34□□□□□ -1.55
PDLIM1P4-201ENST00000504327 SLC12A8A0AV02 714 aa5.34□□□□□ -1.55
PDLIM1P4-201ENST00000504327 H0Y858 1186 aa5.34□□□□□ -1.55
PDLIM1P4-201ENST00000504327 M0R2C6 588 aa5.34□□□□□ -1.55
PDLIM1P4-201ENST00000504327 GLRX3O76003 335 aaKnown RBP5.34□□□□□ -1.55
PDLIM1P4-201ENST00000504327 ASMTLO95671 621 aa5.34□□□□□ -1.55
PDLIM1P4-201ENST00000504327 CHGBP05060 677 aa5.34□□□□□ -1.55
PDLIM1P4-201ENST00000504327 MYL1P05976 194 aa5.34□□□□□ -1.55
PDLIM1P4-201ENST00000504327 IGFALSP35858 605 aa5.34□□□□□ -1.55
PDLIM1P4-201ENST00000504327 EVA1CP58658 441 aa5.34□□□□□ -1.55
PDLIM1P4-201ENST00000504327 IL13RA1P78552 427 aa5.34□□□□□ -1.55
PDLIM1P4-201ENST00000504327 FNDC3BQ53EP0 1204 aaKnown RBP5.34□□□□□ -1.55
PDLIM1P4-201ENST00000504327 BRDTQ58F21 947 aaPredicted RBP5.34□□□□□ -1.55
PDLIM1P4-201ENST00000504327 PPP4R4Q6NUP7 873 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms